RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 LOC100130705A0A1B0GUX0 176 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 TIMM17BO60830 172 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 CRYGAP11844 174 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 DEFA4P12838 97 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 HLA-DRB4P13762 266 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 COX6B1P14854 86 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 MT3P25713 68 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 FXYD2P54710 66 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 PLGLB1Q02325 96 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 CCSMST1Q4G0I0 132 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 FAM27BQ5VT28 67 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 ZNF720Q7Z2F6 126 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.89□□□□□ -1.79
TRAV35-201ENST00000390462 MRPS24Q96EL2 167 aaKnown RBP3.89□□□□□ -1.79
TRAV35-201ENST00000390462 SDF2Q99470 211 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 BCL2L10Q9HD36 194 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 SCN3BQ9NY72 215 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 MINOS1-NBL1R4GNA1 71 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 HLA-DRB4X5D2U9 266 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 DOCK10Q96BY6 2186 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 CNTRLQ7Z7A1 2325 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 ANK2Q01484 3957 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 HBDP02042 147 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 ZNF14P17017 642 aaPredicted RBP3.88□□□□□ -1.79
TRAV35-201ENST00000390462 FGF7P21781 194 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 TMEM91Q6ZNR0 172 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 RPS19BP1Q86WX3 136 aaKnown RBP3.88□□□□□ -1.79
TRAV35-201ENST00000390462 GKN2Q86XP6 184 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 RNF182Q8N6D2 247 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 FAM216BQ8N7L0 139 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 OR5D14Q8NGL3 314 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 SCRT1Q9BWW7 348 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 CST9LQ9H4G1 147 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 CCDC167Q9P0B6 97 aa3.88□□□□□ -1.79
TRAV35-201ENST00000390462 CLPSP04118 112 aa3.87□□□□□ -1.79
TRAV35-201ENST00000390462 TRGC1P0CF51 173 aa3.87□□□□□ -1.79
TRAV35-201ENST00000390462 ZNF705BP0CI00 300 aaPredicted RBP3.87□□□□□ -1.79
TRAV35-201ENST00000390462 PABPC1L2AQ5JQF8 200 aa3.87□□□□□ -1.79
TRAV35-201ENST00000390462 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
TRAV35-201ENST00000390462 LCN15Q6UWW0 184 aa3.87□□□□□ -1.79
TRAV35-201ENST00000390462 SLC35E3Q7Z769 313 aa3.87□□□□□ -1.79
TRAV35-201ENST00000390462 DUSP21Q9H596 190 aa3.87□□□□□ -1.79
TRAV35-201ENST00000390462 NHP2Q9NX24 153 aaKnown RBP3.87□□□□□ -1.79
TRAV35-201ENST00000390462 COMMD3Q9UBI1 195 aa3.87□□□□□ -1.79
TRAV35-201ENST00000390462 INTS1Q8N201 2190 aaKnown RBP3.86□□□□□ -1.79
TRAV35-201ENST00000390462 TLN2Q9Y4G6 2542 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 IGLV3-16A0A075B6K0 115 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 BBIP1A8MTZ0 92 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 SHBGP04278 402 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 AKAIN1P0CW23 69 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 SNRPD3P62318 126 aaKnown RBP3.86□□□□□ -1.79
TRAV35-201ENST00000390462 PPP3R1P63098 170 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 SPINK14Q6IE38 97 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 TMEM136Q6ZRR5 245 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 TEN1Q86WV5 123 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 FDCSPQ8NFU4 85 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 CCL4L1Q8NHW4 92 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 OR4C12Q96R67 309 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 SMR3AQ99954 134 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 LINC00467Q9BRT7 94 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 HHLA3Q9XRX5 114 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 SPTBP11277 2137 aa3.86□□□□□ -1.79
TRAV35-201ENST00000390462 CHD3Q12873 2000 aaKnown RBP3.85□□□□□ -1.79
TRAV35-201ENST00000390462 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.85□□□□□ -1.79
TRAV35-201ENST00000390462 A0A0G2JMM0 328 aa3.85□□□□□ -1.79
TRAV35-201ENST00000390462 A0A1W2PPB8 328 aa3.85□□□□□ -1.79
TRAV35-201ENST00000390462 KIR3DP1A8MWS1 328 aa3.85□□□□□ -1.79
TRAV35-201ENST00000390462 TPT1P13693 172 aaKnown RBP3.85□□□□□ -1.79
TRAV35-201ENST00000390462 LSM3P62310 102 aaKnown RBP3.85□□□□□ -1.79
TRAV35-201ENST00000390462 MRPS36P82909 103 aaKnown RBP3.85□□□□□ -1.79
TRAV35-201ENST00000390462 CDK5R1Q15078 307 aa3.85□□□□□ -1.79
TRAV35-201ENST00000390462 IZUMO2Q6UXV1 221 aa3.85□□□□□ -1.79
TRAV35-201ENST00000390462 LINC00311Q8N616 119 aa3.85□□□□□ -1.79
TRAV35-201ENST00000390462 PATE1Q8WXA2 126 aa3.85□□□□□ -1.79
TRAV35-201ENST00000390462 PP6455Q8WZ26 134 aa3.85□□□□□ -1.79
TRAV35-201ENST00000390462 CHCHD1Q96BP2 118 aaKnown RBP3.85□□□□□ -1.79
TRAV35-201ENST00000390462 BOKQ9UMX3 212 aaPredicted RBP3.85□□□□□ -1.79
TRAV35-201ENST00000390462 HRNRQ86YZ3 2850 aaPredicted RBP3.84□□□□□ -1.79
TRAV35-201ENST00000390462 IGHV1-18A0A0C4DH31 117 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 CDC42EP2O14613 210 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 CGAP01215 116 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 TNFP01375 233 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 GNG4P50150 75 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 RELAQ04206 551 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 MEIG1Q5JSS6 88 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 Q6P435 159 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 KRTAP1-5Q9BYS1 174 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 ZFP30Q9Y2G7 519 aa3.84□□□□□ -1.79
TRAV35-201ENST00000390462 NOTCH1P46531 2555 aa3.83□□□□□ -1.8
TRAV35-201ENST00000390462 TRAV40A0A0B4J280 105 aa3.83□□□□□ -1.8
TRAV35-201ENST00000390462 RPL36A-HNRNPH2H7BZ11 118 aa3.83□□□□□ -1.8
TRAV35-201ENST00000390462 HIST1H1BP16401 226 aaKnown RBP3.83□□□□□ -1.8
TRAV35-201ENST00000390462 EIF4EBP1Q13541 118 aaPredicted RBP3.83□□□□□ -1.8
TRAV35-201ENST00000390462 AAED1Q7RTV5 226 aa3.83□□□□□ -1.8
TRAV35-201ENST00000390462 RETNLBQ9BQ08 111 aa3.83□□□□□ -1.8
TRAV35-201ENST00000390462 DNAJC15Q9Y5T4 150 aa3.83□□□□□ -1.8
TRAV35-201ENST00000390462 ZANQ9Y493 2812 aa3.83□□□□□ -1.8
TRAV35-201ENST00000390462 SONP18583 2426 aaKnown RBP3.82□□□□□ -1.8
TRAV35-201ENST00000390462 ARID1AO14497 2285 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms