RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 KIR2DL5AQ8N109 375 aa14.54□□□□□ -0.08
PDLIM5-205ENST00000380180 RPL39LQ96EH5 51 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-205ENST00000380180 CMC4P56277 68 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-205ENST00000380180 TRPT1Q86TN4 253 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-205ENST00000380180 H0Y8G0 127 aa14.52□□□□□ -0.09
PDLIM5-205ENST00000380180 LINC00482Q8N8I6 264 aa14.52□□□□□ -0.09
PDLIM5-205ENST00000380180 XCL2Q9UBD3 114 aa14.52□□□□□ -0.09
PDLIM5-205ENST00000380180 INSP01308 110 aa14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 BEAN1Q3B7T3 259 aa14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 ZNF876PQ49A33 203 aa14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 LINC01587Q99440 93 aa14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 MCRIP2Q9BUT9 160 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 FCER1GP30273 86 aa14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 SUMO2P61956 95 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 C20orf144Q9BQM9 153 aa14.51□□□□□ -0.09
PDLIM5-205ENST00000380180 FAM74A4Q5TZK3 123 aa14.5□□□□□ -0.09
PDLIM5-205ENST00000380180 C20orf78Q9BR46 151 aa14.5□□□□□ -0.09
PDLIM5-205ENST00000380180 SMIM2Q9BVW6 85 aa14.5□□□□□ -0.09
PDLIM5-205ENST00000380180 TCAPO15273 167 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 CRYGDP07320 174 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 MAJINQ3KP22 176 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 C20orf202A1L168 122 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 F5H697 171 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 LAGE3Q14657 143 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 SPATA45Q537H7 98 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 SUMO4Q6EEV6 95 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 FAM110AQ9BQ89 295 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 LINC00467Q9BRT7 94 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 WFDC10AQ9H1F0 79 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 C19orf73Q9NVV2 129 aa14.49□□□□□ -0.09
PDLIM5-205ENST00000380180 NACAE9PAV3 2078 aa14.48□□□□□ -0.09
PDLIM5-205ENST00000380180 PPP1R17O96001 155 aa14.48□□□□□ -0.09
PDLIM5-205ENST00000380180 TMEM158Q8WZ71 300 aa14.48□□□□□ -0.09
PDLIM5-205ENST00000380180 NOTCH3Q9UM47 2321 aa14.48□□□□□ -0.09
PDLIM5-205ENST00000380180 TENM1Q9UKZ4 2725 aa14.48□□□□□ -0.09
PDLIM5-205ENST00000380180 NUTF2P61970 127 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-205ENST00000380180 ZNF705AQ6ZN79 300 aaPredicted RBP14.48□□□□□ -0.09
PDLIM5-205ENST00000380180 LINC01545Q5VT33 79 aa14.47□□□□□ -0.09
PDLIM5-205ENST00000380180 IFI27L1Q96BM0 104 aa14.47□□□□□ -0.09
PDLIM5-205ENST00000380180 TRAV9-2A0A087WT02 112 aa14.46□□□□□ -0.09
PDLIM5-205ENST00000380180 ZNF415Q09FC8 603 aa14.46□□□□□ -0.09
PDLIM5-205ENST00000380180 C1orf158Q8N1D5 194 aa14.46□□□□□ -0.09
PDLIM5-205ENST00000380180 DEFA6Q01524 100 aa14.46□□□□□ -0.1
PDLIM5-205ENST00000380180 C11orf72Q8NBR9 251 aa14.46□□□□□ -0.1
PDLIM5-205ENST00000380180 C18orf15Q96N68 181 aa14.46□□□□□ -0.1
PDLIM5-205ENST00000380180 PMCHL2Q9BQD1 86 aa14.46□□□□□ -0.1
PDLIM5-205ENST00000380180 TMEM208Q9BTX3 173 aa14.46□□□□□ -0.1
PDLIM5-205ENST00000380180 TEP1Q99973 2627 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-205ENST00000380180 ZNF56Q15929 161 aa14.45□□□□□ -0.1
PDLIM5-205ENST00000380180 ATRQ13535 2644 aa14.45□□□□□ -0.1
PDLIM5-205ENST00000380180 M0R2P5 195 aa14.44□□□□□ -0.1
PDLIM5-205ENST00000380180 CITED1Q99966 193 aa14.44□□□□□ -0.1
PDLIM5-205ENST00000380180 NDUFAF3Q9BU61 184 aa14.44□□□□□ -0.1
PDLIM5-205ENST00000380180 IGHV3OR16-12A0A075B7B8 117 aa14.44□□□□□ -0.1
PDLIM5-205ENST00000380180 SPATA3Q8NHX4 192 aa14.44□□□□□ -0.1
PDLIM5-205ENST00000380180 CSTL1Q9H114 145 aa14.44□□□□□ -0.1
PDLIM5-205ENST00000380180 ST20Q9HBF5 79 aa14.44□□□□□ -0.1
PDLIM5-205ENST00000380180 AZU1P20160 251 aa14.43□□□□□ -0.1
PDLIM5-205ENST00000380180 C14orf144Q96I85 54 aa14.43□□□□□ -0.1
PDLIM5-205ENST00000380180 VWFP04275 2813 aa14.43□□□□□ -0.1
PDLIM5-205ENST00000380180 IGLL1P15814 213 aa14.42□□□□□ -0.1
PDLIM5-205ENST00000380180 MIEN1Q9BRT3 115 aa14.42□□□□□ -0.1
PDLIM5-205ENST00000380180 CYSRT1A8MQ03 144 aa14.42□□□□□ -0.1
PDLIM5-205ENST00000380180 M0QY20 66 aa14.42□□□□□ -0.1
PDLIM5-205ENST00000380180 NUDT3O95989 172 aa14.42□□□□□ -0.1
PDLIM5-205ENST00000380180 GIG44P09565 113 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-205ENST00000380180 RPL35AP18077 110 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-205ENST00000380180 K7EMI3 77 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 POLR2KP53803 58 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 ORMDL2Q53FV1 153 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 hDV102S1A0JD36 115 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 LGALS9BQ3B8N2 356 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 PIK3CD-AS1Q5SR53 167 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 LGALS9CQ6DKI2 356 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 NEGR1Q7Z3B1 354 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 PTH2Q96A98 100 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 SPXQ9BT56 116 aa14.41□□□□□ -0.1
PDLIM5-205ENST00000380180 RPL32P62910 135 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-205ENST00000380180 MORN3Q6PF18 240 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-205ENST00000380180 IGLC3P0DOY3 106 aa14.39□□□□□ -0.11
PDLIM5-205ENST00000380180 TRBV6-5A0A0K0K1A5 114 aa14.39□□□□□ -0.11
PDLIM5-205ENST00000380180 A8MWV9 139 aa14.39□□□□□ -0.11
PDLIM5-205ENST00000380180 INSL3P51460 131 aa14.39□□□□□ -0.11
PDLIM5-205ENST00000380180 IGHV3-73A0A0B4J1V6 119 aa14.38□□□□□ -0.11
PDLIM5-205ENST00000380180 SDHAF1A6NFY7 115 aa14.38□□□□□ -0.11
PDLIM5-205ENST00000380180 VCYO14598 125 aa14.37□□□□□ -0.11
PDLIM5-205ENST00000380180 ATP5LO75964 103 aa14.37□□□□□ -0.11
PDLIM5-205ENST00000380180 PRSS1P07477 247 aa14.37□□□□□ -0.11
PDLIM5-205ENST00000380180 C9orf66Q5T8R8 295 aa14.37□□□□□ -0.11
PDLIM5-205ENST00000380180 UFSP1Q6NVU6 142 aa14.37□□□□□ -0.11
PDLIM5-205ENST00000380180 MRPL16Q9NX20 251 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-205ENST00000380180 GOLT1BQ9Y3E0 138 aa14.37□□□□□ -0.11
PDLIM5-205ENST00000380180 CFAP126Q5VTH2 177 aa14.36□□□□□ -0.11
PDLIM5-205ENST00000380180 RNASE8Q8TDE3 154 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-205ENST00000380180 DEFB104AQ8WTQ1 72 aa14.36□□□□□ -0.11
PDLIM5-205ENST00000380180 TOMM6Q96B49 74 aa14.36□□□□□ -0.11
PDLIM5-205ENST00000380180 UQCR10Q9UDW1 63 aa14.36□□□□□ -0.11
PDLIM5-205ENST00000380180 TRBV27A0A0K0K1C4 114 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms