RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 GYPEP15421 78 aa16.1■□□□□ 0.17
SKI-201ENST00000378536 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.1■□□□□ 0.17
SKI-201ENST00000378536 IGKV2-29A2NJV5 120 aaPredicted RBP16.1■□□□□ 0.17
SKI-201ENST00000378536 DEFB114Q30KQ6 69 aa16.1■□□□□ 0.17
SKI-201ENST00000378536 CTRLP40313 264 aa16.09■□□□□ 0.17
SKI-201ENST00000378536 RNASE13Q5GAN3 156 aaKnown RBP16.09■□□□□ 0.17
SKI-201ENST00000378536 DEFB125Q8N687 156 aa16.09■□□□□ 0.17
SKI-201ENST00000378536 C19orf71A6NCJ1 209 aa16.08■□□□□ 0.17
SKI-201ENST00000378536 MRPL23Q16540 153 aaKnown RBP16.08■□□□□ 0.17
SKI-201ENST00000378536 ICOSQ9Y6W8 199 aa16.08■□□□□ 0.17
SKI-201ENST00000378536 CCDC168Q8NDH2 2452 aa16.08■□□□□ 0.16
SKI-201ENST00000378536 K7EQG2 157 aa16.08■□□□□ 0.16
SKI-201ENST00000378536 AVPP01185 164 aa16.08■□□□□ 0.16
SKI-201ENST00000378536 SCGB1A1P11684 91 aa16.08■□□□□ 0.16
SKI-201ENST00000378536 CLPSL2Q6UWE3 100 aa16.07■□□□□ 0.16
SKI-201ENST00000378536 ATP6V0E2Q8NHE4 81 aa16.07■□□□□ 0.16
SKI-201ENST00000378536 ADAMTS20P59510 1910 aa16.07■□□□□ 0.16
SKI-201ENST00000378536 HILS1P60008 231 aa16.06■□□□□ 0.16
SKI-201ENST00000378536 DAZ2Q13117 558 aaKnown RBP16.06■□□□□ 0.16
SKI-201ENST00000378536 DAZ4Q86SG3 579 aaKnown RBP16.06■□□□□ 0.16
SKI-201ENST00000378536 DAZ3Q9NR90 486 aaKnown RBP16.06■□□□□ 0.16
SKI-201ENST00000378536 ZNF747Q9BV97 191 aa16.06■□□□□ 0.16
SKI-201ENST00000378536 GATD1Q8NB37 220 aa16.06■□□□□ 0.16
SKI-201ENST00000378536 SH2D6Q7Z4S9 175 aa16.05■□□□□ 0.16
SKI-201ENST00000378536 TMEM263Q8WUH6 116 aaKnown RBP16.05■□□□□ 0.16
SKI-201ENST00000378536 ANKRD11Q6UB99 2663 aaPredicted RBP16.05■□□□□ 0.16
SKI-201ENST00000378536 ODF3Q96PU9 254 aa16.05■□□□□ 0.16
SKI-201ENST00000378536 SPANXA1Q9NS26 97 aa16.05■□□□□ 0.16
SKI-201ENST00000378536 Q6ZQT7 251 aa16.05■□□□□ 0.16
SKI-201ENST00000378536 LINC01006Q8NI28 216 aa16.05■□□□□ 0.16
SKI-201ENST00000378536 BBC3Q96PG8 261 aaPredicted RBP16.05■□□□□ 0.16
SKI-201ENST00000378536 MDFICQ9P1T7 246 aa16.05■□□□□ 0.16
SKI-201ENST00000378536 NDUFA12Q9UI09 145 aa16.04■□□□□ 0.16
SKI-201ENST00000378536 PRSS29PA6NIE9 313 aa16.04■□□□□ 0.16
SKI-201ENST00000378536 PFN2P35080 140 aa16.04■□□□□ 0.16
SKI-201ENST00000378536 DKK2Q9UBU2 259 aa16.04■□□□□ 0.16
SKI-201ENST00000378536 ATXN8Q156A1 80 aa16.03■□□□□ 0.16
SKI-201ENST00000378536 TNCP24821 2201 aa16.03■□□□□ 0.16
SKI-201ENST00000378536 Q6ZS46 218 aa16.03■□□□□ 0.16
SKI-201ENST00000378536 NAV3Q8IVL0 2385 aa16.03■□□□□ 0.16
SKI-201ENST00000378536 ZNF80P51504 273 aaPredicted RBP16.03■□□□□ 0.16
SKI-201ENST00000378536 HHLA3Q9XRX5 114 aa16.03■□□□□ 0.16
SKI-201ENST00000378536 SPINK8P0C7L1 97 aa16.02■□□□□ 0.16
SKI-201ENST00000378536 ZFP2Q6ZN57 461 aa16.02■□□□□ 0.16
SKI-201ENST00000378536 KIR3DS1Q14943 382 aa16.02■□□□□ 0.16
SKI-201ENST00000378536 SHISA2Q6UWI4 295 aa16.02■□□□□ 0.16
SKI-201ENST00000378536 NAA38Q9BRA0 125 aaKnown RBP16.02■□□□□ 0.16
SKI-201ENST00000378536 DEFB4AO15263 64 aa16.02■□□□□ 0.15
SKI-201ENST00000378536 IGLV1-40P01703 118 aa16.02■□□□□ 0.15
SKI-201ENST00000378536 C20orf173Q96LM9 149 aa16.02■□□□□ 0.15
SKI-201ENST00000378536 PGPEP1Q9NXJ5 209 aa16.01■□□□□ 0.15
SKI-201ENST00000378536 H3BMM0 161 aa16.01■□□□□ 0.15
SKI-201ENST00000378536 MRPL52Q86TS9 123 aaKnown RBP16.01■□□□□ 0.15
SKI-201ENST00000378536 IGLL1P15814 213 aa16.01■□□□□ 0.15
SKI-201ENST00000378536 ESM1Q9NQ30 184 aa16.01■□□□□ 0.15
SKI-201ENST00000378536 IGLV2-8P01709 118 aa16■□□□□ 0.15
SKI-201ENST00000378536 TRBV7-3A0A075B6L6 115 aa16■□□□□ 0.15
SKI-201ENST00000378536 XCL1P47992 114 aa16■□□□□ 0.15
SKI-201ENST00000378536 COX8AP10176 69 aa16■□□□□ 0.15
SKI-201ENST00000378536 J3QQQ9 107 aa15.99■□□□□ 0.15
SKI-201ENST00000378536 IGKV2D-24A0A075B6R9 120 aa15.99■□□□□ 0.15
SKI-201ENST00000378536 IGLC3P0DOY3 106 aa15.99■□□□□ 0.15
SKI-201ENST00000378536 COA6Q5JTJ3 125 aaKnown RBP15.99■□□□□ 0.15
SKI-201ENST00000378536 HIVEP3Q5T1R4 2406 aa15.98■□□□□ 0.15
SKI-201ENST00000378536 TNRC6BQ9UPQ9 1833 aaKnown RBP15.98■□□□□ 0.15
SKI-201ENST00000378536 CCL18P55774 89 aa15.98■□□□□ 0.15
SKI-201ENST00000378536 LINC00322Q6ZN03 302 aaPredicted RBP15.97■□□□□ 0.15
SKI-201ENST00000378536 PRRC2AP48634 2157 aaKnown RBP15.97■□□□□ 0.15
SKI-201ENST00000378536 TTC32Q5I0X7 151 aa15.97■□□□□ 0.15
SKI-201ENST00000378536 UBE2WQ96B02 151 aa15.97■□□□□ 0.15
SKI-201ENST00000378536 MLST8Q9BVC4 326 aa15.97■□□□□ 0.15
SKI-201ENST00000378536 HIST2H2BDQ6DRA6 164 aa15.96■□□□□ 0.15
SKI-201ENST00000378536 OVOL2Q9BRP0 275 aa15.96■□□□□ 0.15
SKI-201ENST00000378536 TRAV4A0A0B4J268 109 aa15.95■□□□□ 0.14
SKI-201ENST00000378536 NXPH4O95158 308 aa15.95■□□□□ 0.14
SKI-201ENST00000378536 SMR3AQ99954 134 aa15.95■□□□□ 0.14
SKI-201ENST00000378536 TP53TG3Q9ULZ0 132 aa15.95■□□□□ 0.14
SKI-201ENST00000378536 TRAV8-2A0A0B4J237 113 aa15.95■□□□□ 0.14
SKI-201ENST00000378536 EREGO14944 169 aa15.94■□□□□ 0.14
SKI-201ENST00000378536 TSPAN13O95857 204 aa15.94■□□□□ 0.14
SKI-201ENST00000378536 C1orf43Q9BWL3 253 aa15.94■□□□□ 0.14
SKI-201ENST00000378536 ARHGAP32A7KAX9 2087 aa15.94■□□□□ 0.14
SKI-201ENST00000378536 SPTBN4Q9H254 2564 aa15.93■□□□□ 0.14
SKI-201ENST00000378536 Q9HAA7 133 aa15.93■□□□□ 0.14
SKI-201ENST00000378536 C18orf65Q6ZTR6 163 aa15.93■□□□□ 0.14
SKI-201ENST00000378536 FRMD6-AS1P0C7T7 363 aa15.93■□□□□ 0.14
SKI-201ENST00000378536 F8W735 103 aaPredicted RBP15.93■□□□□ 0.14
SKI-201ENST00000378536 MTURNQ8N3F0 131 aa15.93■□□□□ 0.14
SKI-201ENST00000378536 NKAPP1Q8N9T2 125 aa15.93■□□□□ 0.14
SKI-201ENST00000378536 AMTNQ6UX39 209 aa15.92■□□□□ 0.14
SKI-201ENST00000378536 NUPR1O60356 82 aa15.92■□□□□ 0.14
SKI-201ENST00000378536 PCP4P48539 62 aa15.91■□□□□ 0.14
SKI-201ENST00000378536 IGHV3-30P01768 117 aa15.91■□□□□ 0.14
SKI-201ENST00000378536 IGHV3-33P01772 117 aa15.91■□□□□ 0.14
SKI-201ENST00000378536 IGHV3-30-3P0DP02 117 aa15.91■□□□□ 0.14
SKI-201ENST00000378536 IGHV3-30-5P0DP03 117 aa15.91■□□□□ 0.14
SKI-201ENST00000378536 PRO0255Q9UI72 69 aa15.91■□□□□ 0.14
SKI-201ENST00000378536 ZNF124Q15973 351 aa15.91■□□□□ 0.14
SKI-201ENST00000378536 RAI1Q7Z5J4 1906 aaPredicted RBP15.9■□□□□ 0.14
SKI-201ENST00000378536 IGLC6P0CF74 106 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms