RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 LY6G6CO95867 125 aa12.66□□□□□ -0.38
RGP1-201ENST00000378078 SPAG11BQ08648 103 aa12.66□□□□□ -0.38
RGP1-201ENST00000378078 SH2D6Q7Z4S9 175 aa12.66□□□□□ -0.38
RGP1-201ENST00000378078 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 IGKV1D-37A0A075B6S9 117 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 C2orf70A6NJV1 201 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 CFC1BP0CG36 223 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 CFC1P0CG37 223 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 PRSS47A8MTI9 375 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 PKIGQ9Y2B9 76 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 Q0VG73 95 aa12.65□□□□□ -0.38
RGP1-201ENST00000378078 IGFL3Q6UXB1 125 aa12.64□□□□□ -0.39
RGP1-201ENST00000378078 FAM19A5Q7Z5A7 132 aaPredicted RBP12.64□□□□□ -0.39
RGP1-201ENST00000378078 SPTBN2O15020 2390 aa12.64□□□□□ -0.39
RGP1-201ENST00000378078 NCOR1O75376 2440 aa12.64□□□□□ -0.39
RGP1-201ENST00000378078 WFDC10BQ8IUB3 73 aa12.64□□□□□ -0.39
RGP1-201ENST00000378078 OPRPNQ99935 248 aaPredicted RBP12.64□□□□□ -0.39
RGP1-201ENST00000378078 A0A0J9YXV3 536 aa12.64□□□□□ -0.39
RGP1-201ENST00000378078 ADORA2A-AS1P86434 159 aa12.64□□□□□ -0.39
RGP1-201ENST00000378078 SPINK6Q6UWN8 80 aa12.64□□□□□ -0.39
RGP1-201ENST00000378078 DNAJC9-AS1A6NH13 148 aa12.63□□□□□ -0.39
RGP1-201ENST00000378078 FAM19A1Q7Z5A9 133 aa12.63□□□□□ -0.39
RGP1-201ENST00000378078 IGHV7-81A0A0B4J1V7 117 aa12.63□□□□□ -0.39
RGP1-201ENST00000378078 PRAC2D3DTV9 90 aa12.63□□□□□ -0.39
RGP1-201ENST00000378078 ZNF106Q9H2Y7 1883 aaKnown RBP12.63□□□□□ -0.39
RGP1-201ENST00000378078 LYL1P12980 280 aa12.63□□□□□ -0.39
RGP1-201ENST00000378078 UBE2D1P51668 147 aa12.63□□□□□ -0.39
RGP1-201ENST00000378078 HERV-K104P63124 156 aa12.63□□□□□ -0.39
RGP1-201ENST00000378078 C20orf78Q9BR46 151 aa12.63□□□□□ -0.39
RGP1-201ENST00000378078 B5MCH6 92 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 CRIPAKQ8N1N5 446 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 CRYGDP07320 174 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 CFPP27918 469 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 C5orf56Q8N8D9 126 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 LYPD6Q86Y78 171 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 Q8NFD4 153 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 PPDPFQ9H3Y8 114 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 UBE2D4Q9Y2X8 147 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
RGP1-201ENST00000378078 PLA2G2CQ5R387 149 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 WI2-2373I1.2A0A1W2PRP0 233 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 C4orf3Q8WVX3 66 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 DIRC1Q969H9 104 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 FOXL2NBQ6ZUU3 175 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 LINC00173Q6ZV60 143 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 LINC00482Q8N8I6 264 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 TP53TG3Q9ULZ0 132 aa12.61□□□□□ -0.39
RGP1-201ENST00000378078 MDFICQ9P1T7 246 aa12.6□□□□□ -0.39
RGP1-201ENST00000378078 NLRC5Q86WI3 1866 aa12.6□□□□□ -0.39
RGP1-201ENST00000378078 IGLV1-44P01699 117 aa12.6□□□□□ -0.39
RGP1-201ENST00000378078 C11orf52Q96A22 123 aa12.6□□□□□ -0.39
RGP1-201ENST00000378078 THSD7BQ9C0I4 1608 aa12.6□□□□□ -0.39
RGP1-201ENST00000378078 DCANP1Q8TF63 244 aa12.6□□□□□ -0.39
RGP1-201ENST00000378078 PLCE1Q9P212 2302 aa12.59□□□□□ -0.39
RGP1-201ENST00000378078 A4D1N5 150 aa12.59□□□□□ -0.39
RGP1-201ENST00000378078 TMEM263Q8WUH6 116 aaKnown RBP12.58□□□□□ -0.39
RGP1-201ENST00000378078 H3BUA1 57 aa12.58□□□□□ -0.4
RGP1-201ENST00000378078 Q6ZS49 121 aa12.58□□□□□ -0.4
RGP1-201ENST00000378078 LINC00311Q8N616 119 aa12.58□□□□□ -0.4
RGP1-201ENST00000378078 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
RGP1-201ENST00000378078 TMEM190Q8WZ59 177 aa12.58□□□□□ -0.4
RGP1-201ENST00000378078 BRK1Q8WUW1 75 aa12.57□□□□□ -0.4
RGP1-201ENST00000378078 DSCAML1Q8TD84 2053 aa12.57□□□□□ -0.4
RGP1-201ENST00000378078 SPANXA1Q9NS26 97 aa12.57□□□□□ -0.4
RGP1-201ENST00000378078 ANAPC1Q9H1A4 1944 aa12.57□□□□□ -0.4
RGP1-201ENST00000378078 C10orf105Q8TEF2 133 aa12.56□□□□□ -0.4
RGP1-201ENST00000378078 FAM236AA0A1B0GUQ0 79 aa12.56□□□□□ -0.4
RGP1-201ENST00000378078 FAM236BA0A1B0GV22 79 aa12.56□□□□□ -0.4
RGP1-201ENST00000378078 FHL1Q13642 323 aa12.56□□□□□ -0.4
RGP1-201ENST00000378078 C2orf16Q68DN1 1984 aa12.56□□□□□ -0.4
RGP1-201ENST00000378078 C16orf54Q6UWD8 224 aa12.55□□□□□ -0.4
RGP1-201ENST00000378078 TTTY13Q9BZ97 58 aa12.55□□□□□ -0.4
RGP1-201ENST00000378078 TRAV23DV6A0A075B6W5 121 aa12.55□□□□□ -0.4
RGP1-201ENST00000378078 Q8N9W7 124 aa12.55□□□□□ -0.4
RGP1-201ENST00000378078 OBSL1O75147 1896 aa12.55□□□□□ -0.4
RGP1-201ENST00000378078 RETNLBQ9BQ08 111 aa12.55□□□□□ -0.4
RGP1-201ENST00000378078 FGF23Q9GZV9 251 aaPredicted RBP12.55□□□□□ -0.4
RGP1-201ENST00000378078 ABCA1O95477 2261 aa12.55□□□□□ -0.4
RGP1-201ENST00000378078 SLPIP03973 132 aa12.55□□□□□ -0.4
RGP1-201ENST00000378078 A0A0B4J2C4 111 aa12.54□□□□□ -0.4
RGP1-201ENST00000378078 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
RGP1-201ENST00000378078 UNQ9165/PRO28630Q6UXU0 137 aa12.54□□□□□ -0.4
RGP1-201ENST00000378078 TRBV10-2A0A0K0K1G8 114 aa12.54□□□□□ -0.4
RGP1-201ENST00000378078 LGALS9O00182 355 aa12.54□□□□□ -0.4
RGP1-201ENST00000378078 NFE4Q86UQ8 179 aa12.53□□□□□ -0.4
RGP1-201ENST00000378078 UBE2D3P61077 147 aa12.53□□□□□ -0.4
RGP1-201ENST00000378078 PIP4P1Q86T03 277 aa12.53□□□□□ -0.4
RGP1-201ENST00000378078 IGLV9-49A0A0B4J1Y8 123 aa12.53□□□□□ -0.4
RGP1-201ENST00000378078 TEX49A0A1B0GTD5 131 aa12.52□□□□□ -0.4
RGP1-201ENST00000378078 COX7BP24311 80 aa12.52□□□□□ -0.4
RGP1-201ENST00000378078 I3L2K1 104 aa12.52□□□□□ -0.41
RGP1-201ENST00000378078 CDPF1Q6NVV7 123 aa12.52□□□□□ -0.41
RGP1-201ENST00000378078 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
RGP1-201ENST00000378078 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
RGP1-201ENST00000378078 PCNX2A6NKB5 2137 aa12.51□□□□□ -0.41
RGP1-201ENST00000378078 C11orf53Q8IXP5 236 aa12.51□□□□□ -0.41
RGP1-201ENST00000378078 Q6ZUT4 128 aa12.5□□□□□ -0.41
RGP1-201ENST00000378078 LINC00526Q96FQ7 95 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms