RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RBMY1BA6NDE4 496 aaKnown RBP18.43■□□□□ 0.54
CTSA-203ENST00000372459 RBMY1EA6NEQ0 496 aaKnown RBP18.43■□□□□ 0.54
CTSA-203ENST00000372459 LINC01546A6NGU7 62 aa18.43■□□□□ 0.54
CTSA-203ENST00000372459 RBMY1DP0C7P1 496 aaKnown RBP18.43■□□□□ 0.54
CTSA-203ENST00000372459 PRSS47A8MTI9 375 aa18.42■□□□□ 0.54
CTSA-203ENST00000372459 H0Y8G0 127 aa18.42■□□□□ 0.54
CTSA-203ENST00000372459 SAP30O75446 220 aa18.42■□□□□ 0.54
CTSA-203ENST00000372459 HBDP02042 147 aa18.42■□□□□ 0.54
CTSA-203ENST00000372459 DEFB125Q8N687 156 aa18.42■□□□□ 0.54
CTSA-203ENST00000372459 MDFICQ9P1T7 246 aa18.42■□□□□ 0.54
CTSA-203ENST00000372459 TRGV11A0A075B6L2 103 aa18.41■□□□□ 0.54
CTSA-203ENST00000372459 ODF3L2Q3SX64 289 aa18.41■□□□□ 0.54
CTSA-203ENST00000372459 NDUFA11Q86Y39 141 aa18.41■□□□□ 0.54
CTSA-203ENST00000372459 MCRIP2Q9BUT9 160 aaKnown RBP18.41■□□□□ 0.54
CTSA-203ENST00000372459 MUC4Q99102 2169 aa18.41■□□□□ 0.54
CTSA-203ENST00000372459 MGPP08493 103 aa18.41■□□□□ 0.54
CTSA-203ENST00000372459 SMIM17P0DL12 118 aa18.41■□□□□ 0.54
CTSA-203ENST00000372459 Q8N8P6 123 aa18.41■□□□□ 0.54
CTSA-203ENST00000372459 PMCHL2Q9BQD1 86 aa18.41■□□□□ 0.54
CTSA-203ENST00000372459 TP73-AS1Q9UF72 201 aa18.4■□□□□ 0.54
CTSA-203ENST00000372459 RBMY1A1P0DJD3 496 aaKnown RBP18.39■□□□□ 0.53
CTSA-203ENST00000372459 RBMY1CP0DJD4 496 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 RBMY1FQ15415 496 aaKnown RBP18.39■□□□□ 0.53
CTSA-203ENST00000372459 LGALS9BQ3B8N2 356 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 LGALS9CQ6DKI2 356 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 SYT8Q8NBV8 401 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 CLUHP3Q96NS8 147 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 WNK1Q9H4A3 2382 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 CBY3A6NI87 242 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 KRTAP10-3P60369 221 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 C12orf54Q6X4T0 127 aa18.39■□□□□ 0.53
CTSA-203ENST00000372459 IGLV2-18A0A075B6J9 118 aa18.38■□□□□ 0.53
CTSA-203ENST00000372459 OR11H12B2RN74 326 aa18.38■□□□□ 0.53
CTSA-203ENST00000372459 COX8AP10176 69 aa18.38■□□□□ 0.53
CTSA-203ENST00000372459 MPV17L2Q567V2 206 aa18.38■□□□□ 0.53
CTSA-203ENST00000372459 POM121L12Q8N7R1 296 aa18.38■□□□□ 0.53
CTSA-203ENST00000372459 KIF25-AS1Q9Y6Z4 181 aa18.38■□□□□ 0.53
CTSA-203ENST00000372459 BVES-AS1Q5T3Y7 98 aa18.37■□□□□ 0.53
CTSA-203ENST00000372459 CRLF1O75462 422 aa18.36■□□□□ 0.53
CTSA-203ENST00000372459 CMC4P56277 68 aaPredicted RBP18.36■□□□□ 0.53
CTSA-203ENST00000372459 STHQ8IWL8 128 aa18.36■□□□□ 0.53
CTSA-203ENST00000372459 SETD2Q9BYW2 2564 aaPredicted RBP18.36■□□□□ 0.53
CTSA-203ENST00000372459 RASL10AQ92737 203 aa18.35■□□□□ 0.53
CTSA-203ENST00000372459 NUDT3O95989 172 aa18.35■□□□□ 0.53
CTSA-203ENST00000372459 PPP1R17O96001 155 aa18.35■□□□□ 0.53
CTSA-203ENST00000372459 IGLV1-51P01701 117 aa18.35■□□□□ 0.53
CTSA-203ENST00000372459 C20orf78Q9BR46 151 aa18.35■□□□□ 0.53
CTSA-203ENST00000372459 FCER1GP30273 86 aa18.34■□□□□ 0.53
CTSA-203ENST00000372459 LINC00315P59091 139 aa18.34■□□□□ 0.53
CTSA-203ENST00000372459 JPT2Q9H910 190 aa18.34■□□□□ 0.53
CTSA-203ENST00000372459 INSP01308 110 aa18.33■□□□□ 0.52
CTSA-203ENST00000372459 UBE2V1Q13404 147 aa18.33■□□□□ 0.52
CTSA-203ENST00000372459 SMIM2Q9BVW6 85 aa18.33■□□□□ 0.52
CTSA-203ENST00000372459 SETXQ7Z333 2677 aaKnown RBP18.32■□□□□ 0.52
CTSA-203ENST00000372459 HTN1P15515 57 aa18.32■□□□□ 0.52
CTSA-203ENST00000372459 SUMO2P61956 95 aaKnown RBP18.32■□□□□ 0.52
CTSA-203ENST00000372459 A0A087WWL8 130 aa18.31■□□□□ 0.52
CTSA-203ENST00000372459 PF4P02776 101 aa18.31■□□□□ 0.52
CTSA-203ENST00000372459 PTTG1IPP53801 180 aa18.31■□□□□ 0.52
CTSA-203ENST00000372459 Q6ZVH6 145 aa18.31■□□□□ 0.52
CTSA-203ENST00000372459 IFI27L1Q96BM0 104 aa18.31■□□□□ 0.52
CTSA-203ENST00000372459 RPL39LQ96EH5 51 aaKnown RBP18.31■□□□□ 0.52
CTSA-203ENST00000372459 LAGE3Q14657 143 aa18.31■□□□□ 0.52
CTSA-203ENST00000372459 C2orf91Q6ZV80 131 aa18.3■□□□□ 0.52
CTSA-203ENST00000372459 TRPT1Q86TN4 253 aaKnown RBP18.3■□□□□ 0.52
CTSA-203ENST00000372459 LINC00467Q9BRT7 94 aa18.3■□□□□ 0.52
CTSA-203ENST00000372459 CCL25O15444 150 aa18.3■□□□□ 0.52
CTSA-203ENST00000372459 ZNF876PQ49A33 203 aa18.3■□□□□ 0.52
CTSA-203ENST00000372459 LINC01587Q99440 93 aa18.3■□□□□ 0.52
CTSA-203ENST00000372459 NSD1Q96L73 2696 aaPredicted RBP18.29■□□□□ 0.52
CTSA-203ENST00000372459 TMEM158Q8WZ71 300 aa18.29■□□□□ 0.52
CTSA-203ENST00000372459 FAM110AQ9BQ89 295 aa18.29■□□□□ 0.52
CTSA-203ENST00000372459 F5H697 171 aa18.28■□□□□ 0.52
CTSA-203ENST00000372459 TAX1BP3O14907 124 aa18.28■□□□□ 0.52
CTSA-203ENST00000372459 FGF6P10767 208 aa18.28■□□□□ 0.52
CTSA-203ENST00000372459 SUMO4Q6EEV6 95 aa18.28■□□□□ 0.52
CTSA-203ENST00000372459 ANKRD39Q53RE8 183 aa18.28■□□□□ 0.52
CTSA-203ENST00000372459 FAM74A4Q5TZK3 123 aa18.28■□□□□ 0.52
CTSA-203ENST00000372459 FN1P02751 2386 aaKnown RBP18.27■□□□□ 0.52
CTSA-203ENST00000372459 ZNF415Q09FC8 603 aa18.27■□□□□ 0.52
CTSA-203ENST00000372459 BEAN1Q3B7T3 259 aa18.27■□□□□ 0.52
CTSA-203ENST00000372459 HIVEP1P15822 2718 aa18.27■□□□□ 0.52
CTSA-203ENST00000372459 K7EMI3 77 aa18.26■□□□□ 0.51
CTSA-203ENST00000372459 CRYGDP07320 174 aa18.26■□□□□ 0.51
CTSA-203ENST00000372459 LINC00482Q8N8I6 264 aa18.26■□□□□ 0.51
CTSA-203ENST00000372459 XCL2Q9UBD3 114 aa18.26■□□□□ 0.51
CTSA-203ENST00000372459 ZNF56Q15929 161 aa18.24■□□□□ 0.51
CTSA-203ENST00000372459 ORMDL2Q53FV1 153 aa18.24■□□□□ 0.51
CTSA-203ENST00000372459 C18orf15Q96N68 181 aa18.24■□□□□ 0.51
CTSA-203ENST00000372459 BOD1L2Q8IYS8 172 aa18.24■□□□□ 0.51
CTSA-203ENST00000372459 M0R2P5 195 aa18.23■□□□□ 0.51
CTSA-203ENST00000372459 PRM2P04554 102 aa18.22■□□□□ 0.51
CTSA-203ENST00000372459 RPL32P62910 135 aaKnown RBP18.22■□□□□ 0.51
CTSA-203ENST00000372459 PIK3CD-AS1Q5SR53 167 aa18.22■□□□□ 0.51
CTSA-203ENST00000372459 CSTL1Q9H114 145 aa18.22■□□□□ 0.51
CTSA-203ENST00000372459 SEC11AP67812 179 aa18.22■□□□□ 0.51
CTSA-203ENST00000372459 PTH2Q96A98 100 aa18.22■□□□□ 0.51
CTSA-203ENST00000372459 C19orf73Q9NVV2 129 aa18.22■□□□□ 0.51
CTSA-203ENST00000372459 SIVA1O15304 175 aa18.21■□□□□ 0.51
CTSA-203ENST00000372459 C2CD3Q4AC94 2353 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms