RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 TPRP12270 2363 aaKnown RBP13.89□□□□□ -0.19
MMP9-201ENST00000372330 LINC00694P0DN24 101 aa13.89□□□□□ -0.19
MMP9-201ENST00000372330 H7C2G1 150 aa13.88□□□□□ -0.19
MMP9-201ENST00000372330 EIF4EBP3O60516 100 aaPredicted RBP13.88□□□□□ -0.19
MMP9-201ENST00000372330 NDUFA7O95182 113 aa13.88□□□□□ -0.19
MMP9-201ENST00000372330 UCNP55089 124 aa13.88□□□□□ -0.19
MMP9-201ENST00000372330 FBXL19-AS1Q494R0 122 aa13.88□□□□□ -0.19
MMP9-201ENST00000372330 C3orf22Q8N5N4 141 aa13.88□□□□□ -0.19
MMP9-201ENST00000372330 S4R3C0 116 aa13.88□□□□□ -0.19
MMP9-201ENST00000372330 IGIPA6NJ69 53 aa13.87□□□□□ -0.19
MMP9-201ENST00000372330 ACYP1P07311 99 aa13.87□□□□□ -0.19
MMP9-201ENST00000372330 FANCD2OSQ96PS1 177 aa13.87□□□□□ -0.19
MMP9-201ENST00000372330 NBASA2RRP1 2371 aa13.87□□□□□ -0.19
MMP9-201ENST00000372330 A0A1B0GX51 115 aa13.87□□□□□ -0.19
MMP9-201ENST00000372330 COX7A1P24310 79 aa13.87□□□□□ -0.19
MMP9-201ENST00000372330 ATP5J2P56134 94 aa13.87□□□□□ -0.19
MMP9-201ENST00000372330 UQCRQO14949 82 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 ATP5G1P05496 136 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 C9orf153Q5TBE3 101 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 RPL39LQ96EH5 51 aaKnown RBP13.86□□□□□ -0.19
MMP9-201ENST00000372330 HRNRQ86YZ3 2850 aaPredicted RBP13.86□□□□□ -0.19
MMP9-201ENST00000372330 ATRXP46100 2492 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 ANKHD1Q8IWZ3 2542 aaKnown RBP13.86□□□□□ -0.19
MMP9-201ENST00000372330 ABCA4P78363 2273 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 RNF223E7ERA6 249 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 H7C423 109 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 TSHBP01222 138 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 ELANEP08246 267 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 COX6CP09669 75 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 MUSTN1Q8IVN3 82 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 MRPL53Q96EL3 112 aaKnown RBP13.86□□□□□ -0.19
MMP9-201ENST00000372330 TIMM17AQ99595 171 aa13.86□□□□□ -0.19
MMP9-201ENST00000372330 J3KT08 172 aa13.85□□□□□ -0.19
MMP9-201ENST00000372330 NPFFO15130 113 aa13.85□□□□□ -0.19
MMP9-201ENST00000372330 WIPF1O43516 503 aa13.85□□□□□ -0.19
MMP9-201ENST00000372330 POM121L12Q8N7R1 296 aa13.85□□□□□ -0.19
MMP9-201ENST00000372330 LEPROTO15243 131 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 CTSGP08311 255 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 EMP1P54849 157 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 CDSNQ15517 529 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 C9orf47Q6ZRZ4 202 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 SMIM9A6NGZ8 99 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 LY6LH3BQJ8 138 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 NBR2O15453 112 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 TRIAP1O43715 76 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 ZNF876PQ49A33 203 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 C14orf178Q8N769 122 aaPredicted RBP13.84□□□□□ -0.19
MMP9-201ENST00000372330 LINC00526Q96FQ7 95 aa13.84□□□□□ -0.19
MMP9-201ENST00000372330 TRGV11A0A075B6L2 103 aa13.83□□□□□ -0.2
MMP9-201ENST00000372330 A0A0J9YX75 114 aa13.83□□□□□ -0.2
MMP9-201ENST00000372330 FAM236AA0A1B0GUQ0 79 aa13.83□□□□□ -0.2
MMP9-201ENST00000372330 FAM236BA0A1B0GV22 79 aa13.83□□□□□ -0.2
MMP9-201ENST00000372330 C3orf56Q8N813 242 aa13.83□□□□□ -0.2
MMP9-201ENST00000372330 TP53TG1Q9Y2A0 90 aa13.83□□□□□ -0.2
MMP9-201ENST00000372330 CCL21O00585 134 aa13.82□□□□□ -0.2
MMP9-201ENST00000372330 RPS28P62857 69 aaKnown RBP13.82□□□□□ -0.2
MMP9-201ENST00000372330 KLRB1Q12918 225 aa13.82□□□□□ -0.2
MMP9-201ENST00000372330 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.82□□□□□ -0.2
MMP9-201ENST00000372330 RNF182Q8N6D2 247 aa13.82□□□□□ -0.2
MMP9-201ENST00000372330 SDHAF1A6NFY7 115 aa13.82□□□□□ -0.2
MMP9-201ENST00000372330 LY6G5BQ8NDX9 201 aa13.82□□□□□ -0.2
MMP9-201ENST00000372330 ZNRF2Q8NHG8 242 aa13.82□□□□□ -0.2
MMP9-201ENST00000372330 BUB3O43684 328 aa13.81□□□□□ -0.2
MMP9-201ENST00000372330 NPBQ8NG41 125 aa13.81□□□□□ -0.2
MMP9-201ENST00000372330 METTL26Q96S19 204 aa13.81□□□□□ -0.2
MMP9-201ENST00000372330 LENEPQ9Y5L5 61 aa13.81□□□□□ -0.2
MMP9-201ENST00000372330 LY6HO94772 140 aa13.81□□□□□ -0.2
MMP9-201ENST00000372330 HERVK_113P63121 156 aa13.81□□□□□ -0.2
MMP9-201ENST00000372330 BEX4Q9NWD9 120 aaPredicted RBP13.81□□□□□ -0.2
MMP9-201ENST00000372330 ARHGAP32A7KAX9 2087 aa13.81□□□□□ -0.2
MMP9-201ENST00000372330 GPHB5Q86YW7 130 aa13.8□□□□□ -0.2
MMP9-201ENST00000372330 DUX3Q96PT4 197 aa13.8□□□□□ -0.2
MMP9-201ENST00000372330 TMEM223A0PJW6 202 aa13.8□□□□□ -0.2
MMP9-201ENST00000372330 MED14OSP0DP75 135 aa13.8□□□□□ -0.2
MMP9-201ENST00000372330 IGHV4OR15-8A0A075B7B6 117 aa13.79□□□□□ -0.2
MMP9-201ENST00000372330 A0A087WW49 117 aa13.79□□□□□ -0.2
MMP9-201ENST00000372330 PHLDA3Q9Y5J5 127 aa13.79□□□□□ -0.2
MMP9-201ENST00000372330 ICOSQ9Y6W8 199 aa13.79□□□□□ -0.2
MMP9-201ENST00000372330 CSMD1Q96PZ7 3565 aa13.79□□□□□ -0.2
MMP9-201ENST00000372330 MGPP08493 103 aa13.79□□□□□ -0.2
MMP9-201ENST00000372330 OOSP1A8MZH6 123 aa13.78□□□□□ -0.2
MMP9-201ENST00000372330 S100A4P26447 101 aaKnown RBP13.78□□□□□ -0.2
MMP9-201ENST00000372330 DPM3Q9P2X0 92 aa13.78□□□□□ -0.2
MMP9-201ENST00000372330 CHD8Q9HCK8 2581 aa13.78□□□□□ -0.2
MMP9-201ENST00000372330 OR13C6PQ8NH95 151 aa13.78□□□□□ -0.2
MMP9-201ENST00000372330 COL6A6A6NMZ7 2263 aa13.77□□□□□ -0.2
MMP9-201ENST00000372330 VCYO14598 125 aa13.77□□□□□ -0.21
MMP9-201ENST00000372330 FAM19A5Q7Z5A7 132 aaPredicted RBP13.77□□□□□ -0.21
MMP9-201ENST00000372330 LINC00643Q86TS7 51 aa13.77□□□□□ -0.21
MMP9-201ENST00000372330 ZNF256Q9Y2P7 627 aaPredicted RBP13.77□□□□□ -0.21
MMP9-201ENST00000372330 ASH1LQ9NR48 2969 aaKnown RBP13.77□□□□□ -0.21
MMP9-201ENST00000372330 LOC107984640A0A0U1RRK4 108 aa13.76□□□□□ -0.21
MMP9-201ENST00000372330 LST1O00453 97 aa13.76□□□□□ -0.21
MMP9-201ENST00000372330 ADORA2A-AS1P86434 159 aa13.76□□□□□ -0.21
MMP9-201ENST00000372330 NCOR2Q9Y618 2525 aa13.76□□□□□ -0.21
MMP9-201ENST00000372330 POLR2KP53803 58 aaKnown RBP13.76□□□□□ -0.21
MMP9-201ENST00000372330 TMEM219Q86XT9 240 aa13.76□□□□□ -0.21
MMP9-201ENST00000372330 IGHV3-23P01764 117 aa13.75□□□□□ -0.21
MMP9-201ENST00000372330 ZFAND3Q9H8U3 227 aa13.75□□□□□ -0.21
MMP9-201ENST00000372330 TRAV25A0A0B4J276 109 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms