RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 A0A087WW49 117 aa12.02□□□□□ -0.48
COL5A1-201ENST00000371817 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.48
COL5A1-201ENST00000371817 LMO1P25800 156 aa12.02□□□□□ -0.49
COL5A1-201ENST00000371817 RBX1P62877 108 aa12.02□□□□□ -0.49
COL5A1-201ENST00000371817 H0Y9J4 135 aa12.02□□□□□ -0.49
COL5A1-201ENST00000371817 APOC4P55056 127 aa12.02□□□□□ -0.49
COL5A1-201ENST00000371817 C11orf86A6NJI1 115 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 WT1-ASQ06250 92 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 SEM1Q6ZVN7 128 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 LRRC75A-AS1Q8N1F1 130 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 GATA1P15976 413 aaPredicted RBP12.01□□□□□ -0.49
COL5A1-201ENST00000371817 GNRH2O43555 120 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 RNF114Q9Y508 228 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 B4DSR2 109 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 UBE2AP49459 152 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 C16orf54Q6UWD8 224 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 SERP2Q8N6R1 65 aa12.01□□□□□ -0.49
COL5A1-201ENST00000371817 COX7A2LO14548 114 aa12□□□□□ -0.49
COL5A1-201ENST00000371817 ZNRD1Q9P1U0 126 aa12□□□□□ -0.49
COL5A1-201ENST00000371817 CASC2Q6XLA1 102 aa12□□□□□ -0.49
COL5A1-201ENST00000371817 M0QXV9 152 aa12□□□□□ -0.49
COL5A1-201ENST00000371817 NOTCH4Q99466 2003 aa12□□□□□ -0.49
COL5A1-201ENST00000371817 HIST2H2BDQ6DRA6 164 aa11.99□□□□□ -0.49
COL5A1-201ENST00000371817 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-201ENST00000371817 MRPL36Q9P0J6 103 aaKnown RBP11.99□□□□□ -0.49
COL5A1-201ENST00000371817 CENPVL3A0A0U1RRI6 287 aa11.99□□□□□ -0.49
COL5A1-201ENST00000371817 E9PLN8 166 aa11.99□□□□□ -0.49
COL5A1-201ENST00000371817 PMAIP1Q13794 54 aa11.99□□□□□ -0.49
COL5A1-201ENST00000371817 GTSF1Q8WW33 167 aa11.99□□□□□ -0.49
COL5A1-201ENST00000371817 ZNF503Q96F45 646 aa11.99□□□□□ -0.49
COL5A1-201ENST00000371817 LYPD2Q6UXB3 125 aa11.99□□□□□ -0.49
COL5A1-201ENST00000371817 LINC01619G3V211 115 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 DEFB121Q5J5C9 76 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 DIRC1Q969H9 104 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 KIAA1671Q9BY89 1806 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 PRR20EP86478 221 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 PRR20CP86479 221 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 PRR20DP86480 221 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 PRR20BP86481 221 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 PRR20AP86496 221 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 TIMM17AQ99595 171 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 FLVCR1-AS1Q8TAF5 88 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 GPR179Q6PRD1 2367 aa11.98□□□□□ -0.49
COL5A1-201ENST00000371817 LOXL1Q08397 574 aaPredicted RBP11.98□□□□□ -0.49
COL5A1-201ENST00000371817 PINLYPA6NC86 204 aa11.97□□□□□ -0.49
COL5A1-201ENST00000371817 PIK3CD-AS1Q5SR53 167 aa11.97□□□□□ -0.49
COL5A1-201ENST00000371817 ABCA2Q9BZC7 2435 aa11.97□□□□□ -0.49
COL5A1-201ENST00000371817 A0A096LPF7 62 aa11.97□□□□□ -0.49
COL5A1-201ENST00000371817 ENHOQ6UWT2 76 aa11.97□□□□□ -0.49
COL5A1-201ENST00000371817 TEX22C9J3V5 150 aa11.97□□□□□ -0.49
COL5A1-201ENST00000371817 Q9HAA7 133 aa11.97□□□□□ -0.49
COL5A1-201ENST00000371817 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
COL5A1-201ENST00000371817 A0A0J9YXV3 536 aa11.96□□□□□ -0.49
COL5A1-201ENST00000371817 DKK4Q9UBT3 224 aa11.96□□□□□ -0.49
COL5A1-201ENST00000371817 COLQQ9Y215 455 aaPredicted RBP11.96□□□□□ -0.49
COL5A1-201ENST00000371817 RETNQ9HD89 108 aa11.96□□□□□ -0.49
COL5A1-201ENST00000371817 BLCAPP62952 87 aa11.96□□□□□ -0.49
COL5A1-201ENST00000371817 MIAQ16674 131 aa11.96□□□□□ -0.49
COL5A1-201ENST00000371817 CAMK2N2Q96S95 79 aa11.96□□□□□ -0.5
COL5A1-201ENST00000371817 FGF23Q9GZV9 251 aaPredicted RBP11.96□□□□□ -0.5
COL5A1-201ENST00000371817 ZNF883P0CG24 379 aa11.96□□□□□ -0.5
COL5A1-201ENST00000371817 C17orf77Q96MU5 243 aa11.96□□□□□ -0.5
COL5A1-201ENST00000371817 CCDC179H3BU77 68 aa11.95□□□□□ -0.5
COL5A1-201ENST00000371817 LINC00694P0DN24 101 aa11.95□□□□□ -0.5
COL5A1-201ENST00000371817 TTTY13Q9BZ97 58 aa11.95□□□□□ -0.5
COL5A1-201ENST00000371817 IGHV7-4-1A0A0J9YVY3 117 aa11.95□□□□□ -0.5
COL5A1-201ENST00000371817 RPL39P62891 51 aaKnown RBP11.95□□□□□ -0.5
COL5A1-201ENST00000371817 UBE2E1P51965 193 aa11.95□□□□□ -0.5
COL5A1-201ENST00000371817 ZNF491Q8N8L2 437 aa11.95□□□□□ -0.5
COL5A1-201ENST00000371817 COX7CP15954 63 aa11.94□□□□□ -0.5
COL5A1-201ENST00000371817 IGHV1-58A0A0C4DH39 117 aa11.94□□□□□ -0.5
COL5A1-201ENST00000371817 TIRAPP58753 221 aa11.94□□□□□ -0.5
COL5A1-201ENST00000371817 NCR3O14931 201 aa11.94□□□□□ -0.5
COL5A1-201ENST00000371817 G3V318 75 aa11.94□□□□□ -0.5
COL5A1-201ENST00000371817 C17orf58Q2M2W7 97 aa11.93□□□□□ -0.5
COL5A1-201ENST00000371817 Q6ZQT7 251 aa11.93□□□□□ -0.5
COL5A1-201ENST00000371817 CD59P13987 128 aa11.93□□□□□ -0.5
COL5A1-201ENST00000371817 IGKV1OR2-108A0A075B7D4 117 aa11.93□□□□□ -0.5
COL5A1-201ENST00000371817 GNLYP22749 145 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 TRBV7-3A0A075B6L6 115 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 MIR7-3HGQ8N6C7 128 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 MRPS36P82909 103 aaKnown RBP11.92□□□□□ -0.5
COL5A1-201ENST00000371817 ARTNQ5T4W7 220 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 IGLV3-19P01714 112 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 SNURFQ9Y675 71 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 K7EQD1 137 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 IGHV1-69P01742 117 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 SMIM26A0A096LP01 95 aa11.92□□□□□ -0.5
COL5A1-201ENST00000371817 C1orf147Q96MC9 270 aaPredicted RBP11.91□□□□□ -0.5
COL5A1-201ENST00000371817 AGPAT4-IT1Q9H0P7 198 aa11.91□□□□□ -0.5
COL5A1-201ENST00000371817 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
COL5A1-201ENST00000371817 LINC00311Q8N616 119 aa11.91□□□□□ -0.5
COL5A1-201ENST00000371817 TPSG1Q9NRR2 321 aa11.91□□□□□ -0.5
COL5A1-201ENST00000371817 GATA3P23771 443 aa11.91□□□□□ -0.5
COL5A1-201ENST00000371817 LINC01356Q8N9X3 169 aa11.91□□□□□ -0.5
COL5A1-201ENST00000371817 IGLV10-54A0A075B6I4 117 aa11.9□□□□□ -0.5
COL5A1-201ENST00000371817 GATA4P43694 442 aa11.9□□□□□ -0.5
COL5A1-201ENST00000371817 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms