RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 C9orf118A6NHY6 69 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 Q6ZQT7 251 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 DEFB125Q8N687 156 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 JMJD1CQ15652 2540 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 LINC01549A6NIU2 74 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 HIST2H2BDQ6DRA6 164 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 SPATA12Q7Z6I5 190 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 CST9LQ9H4G1 147 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 GAS8-AS1O95177 125 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 GAGE13Q4V321 117 aa6.44□□□□□ -1.38
PTPRK-206ENST00000368215 TRBV25-1A0A075B6N4 114 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 TRAV8-2A0A0B4J237 113 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 TRAV13-1A0A0B4J241 112 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 MYMXA0A1B0GTQ4 84 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 ATP6V0BQ99437 205 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 RPL39P62891 51 aaKnown RBP6.43□□□□□ -1.38
PTPRK-206ENST00000368215 DEFB113Q30KQ7 82 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 PTPRBP23467 1997 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 FRYQ5TBA9 3013 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 F8W735 103 aaPredicted RBP6.43□□□□□ -1.38
PTPRK-206ENST00000368215 RPL36AP83881 106 aaKnown RBP6.43□□□□□ -1.38
PTPRK-206ENST00000368215 Q8N1Y9 231 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 RPL36ALQ969Q0 106 aaKnown RBP6.43□□□□□ -1.38
PTPRK-206ENST00000368215 C11orf21Q9P2W6 132 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 FN1P02751 2386 aaKnown RBP6.43□□□□□ -1.38
PTPRK-206ENST00000368215 I3L3M4 83 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 MRPS12O15235 138 aaKnown RBP6.43□□□□□ -1.38
PTPRK-206ENST00000368215 URB1-AS1Q96HZ7 61 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 ZNF625Q96I27 306 aaPredicted RBP6.43□□□□□ -1.38
PTPRK-206ENST00000368215 CHCHD5Q9BSY4 110 aa6.43□□□□□ -1.38
PTPRK-206ENST00000368215 ODF1Q14990 250 aa6.42□□□□□ -1.38
PTPRK-206ENST00000368215 FOXI2Q6ZQN5 318 aa6.42□□□□□ -1.38
PTPRK-206ENST00000368215 MDFICQ9P1T7 246 aa6.42□□□□□ -1.38
PTPRK-206ENST00000368215 AMTNQ6UX39 209 aa6.42□□□□□ -1.38
PTPRK-206ENST00000368215 ADARB2-AS1A8MUL3 147 aa6.42□□□□□ -1.38
PTPRK-206ENST00000368215 OCIAD2Q56VL3 154 aa6.42□□□□□ -1.38
PTPRK-206ENST00000368215 BOD1L1Q8NFC6 3051 aa6.42□□□□□ -1.38
PTPRK-206ENST00000368215 GAGE12JA6NER3 117 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 TAX1BP3O14907 124 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 GAGE4Q13068 117 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 GAGE5Q13069 117 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 GPHB5Q86YW7 130 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 CEND1Q8N111 149 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 GATD1Q8NB37 220 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 OR13C6PQ8NH95 151 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 TIMM21Q9BVV7 248 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 CLPSL1A2RUU4 121 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 DEFB130BP0DP73 79 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 DEFB130AP0DP74 79 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 FXYD2P54710 66 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 Q8N976 141 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 ZNRF2Q8NHG8 242 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 PLEKHB2Q96CS7 222 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 AVPP01185 164 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 PRR9Q5T870 116 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 TMEM141Q96I45 108 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 TMEM238C9JI98 176 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 ADAMTSL5Q6ZMM2 481 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 RNF185Q96GF1 192 aa6.41□□□□□ -1.38
PTPRK-206ENST00000368215 ACANP16112 2415 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 A0A1W2PPM0 123 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 A8MWV9 139 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 K7EMT4 169 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 SIVA1O15304 175 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 ZFP2Q6ZN57 461 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 BOD1L2Q8IYS8 172 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 ZFAND2AQ8N6M9 145 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 USP34Q70CQ2 3546 aa6.4□□□□□ -1.38
PTPRK-206ENST00000368215 AZU1P20160 251 aa6.4□□□□□ -1.39
PTPRK-206ENST00000368215 AKAP13Q12802 2813 aa6.4□□□□□ -1.39
PTPRK-206ENST00000368215 GAGE7O76087 117 aa6.4□□□□□ -1.39
PTPRK-206ENST00000368215 GAGE12FP0CL80 117 aa6.4□□□□□ -1.39
PTPRK-206ENST00000368215 GAGE12GP0CL81 117 aa6.4□□□□□ -1.39
PTPRK-206ENST00000368215 GAGE12IP0CL82 117 aa6.4□□□□□ -1.39
PTPRK-206ENST00000368215 C11orf68Q9H3H3 251 aaKnown RBP6.4□□□□□ -1.39
PTPRK-206ENST00000368215 DOPEY1Q5JWR5 2465 aa6.4□□□□□ -1.39
PTPRK-206ENST00000368215 H3BMG7 143 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 K7EP13 123 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 K7EP34 96 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 IGHG4P01861 327 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 ETDBQ3ZM63 59 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 TMEM61Q8N0U2 210 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 CENPEQ02224 2701 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.39□□□□□ -1.39
PTPRK-206ENST00000368215 A0A0J9YX75 114 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 IGKV2-29A2NJV5 120 aaPredicted RBP6.39□□□□□ -1.39
PTPRK-206ENST00000368215 J3QQQ9 107 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 EDN2P20800 178 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 SRSF2Q01130 221 aaKnown RBP6.39□□□□□ -1.39
PTPRK-206ENST00000368215 RHODO00212 210 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 C12orf74Q32Q52 190 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 RASL10AQ92737 203 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 U3KQE9 123 aa6.39□□□□□ -1.39
PTPRK-206ENST00000368215 BAALCQ8WXS3 180 aa6.38□□□□□ -1.39
PTPRK-206ENST00000368215 OPRPNQ99935 248 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-206ENST00000368215 M0R2P5 195 aa6.38□□□□□ -1.39
PTPRK-206ENST00000368215 CCL24O00175 119 aa6.38□□□□□ -1.39
PTPRK-206ENST00000368215 HIST2H2BCQ6DN03 193 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms