RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 DEFB119Q8N690 84 aa1.54□□□□□ -2.16
RNU6-1249P-201ENST00000363237 OBSCN-AS1Q96MR7 158 aa1.54□□□□□ -2.16
RNU6-1249P-201ENST00000363237 ZFYVE16Q7Z3T8 1539 aa1.54□□□□□ -2.16
RNU6-1249P-201ENST00000363237 E9PCH4 1651 aa1.54□□□□□ -2.16
RNU6-1249P-201ENST00000363237 J3QKU1 62 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 CITO14578 2027 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 IFNA17P01571 189 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 NPC2P61916 151 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 CATR1Q13166 79 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 C9orf153Q5TBE3 101 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 RBBP6Q7Z6E9 1792 aaKnown RBP1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 C8orf59Q8N0T1 100 aaPredicted RBP1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 TSKUQ8WUA8 353 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 RREB1Q92766 1687 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 COA4Q9NYJ1 87 aa1.53□□□□□ -2.16
RNU6-1249P-201ENST00000363237 IFT140Q96RY7 1462 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TCRBV3S1A0A5B6 114 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 S100A8P05109 93 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 CCKP06307 115 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 DEFB132Q7Z7B7 95 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 SVBPQ8N300 66 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 Q8N8P6 123 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 DLG5Q8TDM6 1919 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 AFDNP55196 1824 aaKnown RBP1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 PARP14Q460N5 1801 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 PATJQ8NI35 1801 aa1.52□□□□□ -2.17
RNU6-1249P-201ENST00000363237 CNTLNQ9NXG0 1405 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TRBV10-3A0A0K0K1G6 114 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TEX49A0A1B0GTD5 131 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 IGKV2-29A2NJV5 120 aaPredicted RBP1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 UBE2G1P62253 170 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 S100A7L2Q5SY68 101 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 KRTAP13-1Q8IUC0 172 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 SBSPONQ8IVN8 264 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 IFI27L1Q96BM0 104 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 ZGRF1Q86YA3 2104 aa1.51□□□□□ -2.17
RNU6-1249P-201ENST00000363237 MYH8P13535 1937 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 PLXNA1Q9UIW2 1896 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 NRXN2Q9P2S2 1712 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TRAV30A0A087WSZ9 112 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TRAV12-3A0A0B4J271 114 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TMEM218A2RU14 115 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TFF1P04155 84 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 IFITM1P13164 125 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 HSD52Q0P140 79 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 LCE3AQ5TA76 89 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 ACBD7Q8N6N7 88 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 C10orf105Q8TEF2 133 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 AMELYQ99218 206 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 ROBO1Q9Y6N7 1651 aa1.5□□□□□ -2.17
RNU6-1249P-201ENST00000363237 SPHKAPQ2M3C7 1700 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 OOSP1A8MZH6 123 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 FXYD4P59646 89 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 INSL4Q14641 139 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 XAF1Q6GPH4 301 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 CYP2G1PQ6ZSU1 146 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 C4orf33Q8N1A6 199 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 AQP10Q96PS8 301 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 AKAP12Q02952 1782 aa1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 BLMP54132 1417 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 CPSF1Q10570 1443 aaKnown RBP1.49□□□□□ -2.17
RNU6-1249P-201ENST00000363237 PHIPQ8WWQ0 1821 aa1.48□□□□□ -2.17
RNU6-1249P-201ENST00000363237 FAM24AA6NFZ4 105 aa1.48□□□□□ -2.17
RNU6-1249P-201ENST00000363237 ATP5EP56381 51 aaPredicted RBP1.48□□□□□ -2.17
RNU6-1249P-201ENST00000363237 C10orf82Q8WW14 230 aa1.48□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TNS1Q9HBL0 1735 aaKnown RBP1.48□□□□□ -2.17
RNU6-1249P-201ENST00000363237 DOCK2Q92608 1830 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 ARAP2Q8WZ64 1704 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TCHHQ07283 1943 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 NBDYA0A0U1RRE5 68 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 LOC101927531A0A1B0GV80 90 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 SPINK8P0C7L1 97 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 CCL8P80075 99 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 RBM3P98179 157 aaKnown RBP1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 FXYD3Q14802 87 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 Q6ZQY7 126 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 ZNF818PQ6ZRF7 136 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 C5orf38Q86SI9 138 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 SPTSSBQ8NFR3 76 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 TET1Q8NFU7 2136 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 PPP1R1CQ8WVI7 109 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 DSCR8Q96T75 97 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 SHROOM2Q13796 1616 aa1.47□□□□□ -2.17
RNU6-1249P-201ENST00000363237 DOCK1Q14185 1865 aa1.46□□□□□ -2.18
RNU6-1249P-201ENST00000363237 SSSCA1O60232 199 aa1.46□□□□□ -2.18
RNU6-1249P-201ENST00000363237 ABCA3Q99758 1704 aa1.46□□□□□ -2.18
RNU6-1249P-201ENST00000363237 CC2D2AQ9P2K1 1620 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 TRAV13-2A0A0B4J235 113 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 UBE2L5PA0A1B0GUS4 154 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 NCR3O14931 201 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 UBE2D1P51668 147 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 UBE2L3P68036 154 aaKnown RBP1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 LINC00575Q6W349 94 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 COMMD6Q7Z4G1 85 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 TTC9CQ8N5M4 171 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 C5orf56Q8N8D9 126 aa1.45□□□□□ -2.18
RNU6-1249P-201ENST00000363237 LRRC37A3O60309 1634 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 ANKRD26Q9UPS8 1709 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms