RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ZMAT4Q9H898 229 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 NLRC5Q86WI3 1866 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 CACNA1HO95180 2353 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 FAM236DA0A1B0GTK5 79 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 JMJD7-PLA2G4BH0Y9G9 81 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 FAM236CP0DP71 79 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 RNF152Q8N8N0 203 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 ATP6V0E2Q8NHE4 81 aa8.6□□□□□ -1.03
GTF3C1-201ENST00000356183 TMEM256-PLSCR3K7ERE1 68 aa8.59□□□□□ -1.03
GTF3C1-201ENST00000356183 NDUFC2-KCTD14E9PQ53 114 aa8.59□□□□□ -1.03
GTF3C1-201ENST00000356183 RBX1P62877 108 aa8.59□□□□□ -1.03
GTF3C1-201ENST00000356183 DAZ2Q13117 558 aaKnown RBP8.59□□□□□ -1.03
GTF3C1-201ENST00000356183 SP5Q6BEB4 398 aaPredicted RBP8.59□□□□□ -1.03
GTF3C1-201ENST00000356183 DAZ4Q86SG3 579 aaKnown RBP8.59□□□□□ -1.03
GTF3C1-201ENST00000356183 DAZ3Q9NR90 486 aaKnown RBP8.59□□□□□ -1.03
GTF3C1-201ENST00000356183 SCXQ7RTU7 201 aa8.59□□□□□ -1.03
GTF3C1-201ENST00000356183 WFDC11Q8NEX6 87 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 SLURP1P55000 103 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 DIRC1Q969H9 104 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 TEX22C9J3V5 150 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 GATA3P23771 443 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.58□□□□□ -1.048e-7■■■■□ 24.7
GTF3C1-201ENST00000356183 GTSF1Q8WW33 167 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 RITA1Q96K30 269 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 USF3Q68DE3 2245 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 GPR179Q6PRD1 2367 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
GTF3C1-201ENST00000356183 C16orf74Q96GX8 76 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 CASC2Q6XLA1 102 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 IGLC6P0CF74 106 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 E9PLD3 99 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 ATP5G1P05496 136 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 C20orf197Q8N268 126 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 LINC00311Q8N616 119 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 COL4A6Q14031 1691 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 PCNX2A6NKB5 2137 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 GTF3C1Q12789 2109 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 IGHV4-59P01825 116 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 PLXNA4Q9HCM2 1894 aa8.57□□□□□ -1.04
GTF3C1-201ENST00000356183 C10orf105Q8TEF2 133 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 C3orf22Q8N5N4 141 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 THSD7BQ9C0I4 1608 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 A0A0J9YWU9 116 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 ABCA4P78363 2273 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 CCL24O00175 119 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
GTF3C1-201ENST00000356183 TEX49A0A1B0GTD5 131 aa8.55□□□□□ -1.04
GTF3C1-201ENST00000356183 LOXL1Q08397 574 aaPredicted RBP8.55□□□□□ -1.04
GTF3C1-201ENST00000356183 EML6Q6ZMW3 1958 aa8.55□□□□□ -1.04
GTF3C1-201ENST00000356183 F8W735 103 aaPredicted RBP8.55□□□□□ -1.04
GTF3C1-201ENST00000356183 NDUFA11Q86Y39 141 aa8.55□□□□□ -1.04
GTF3C1-201ENST00000356183 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
GTF3C1-201ENST00000356183 ENHOQ6UWT2 76 aa8.55□□□□□ -1.04
GTF3C1-201ENST00000356183 SPATA12Q7Z6I5 190 aa8.55□□□□□ -1.04
GTF3C1-201ENST00000356183 LINC00643Q86TS7 51 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 FGF23Q9GZV9 251 aaPredicted RBP8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 MED13LQ71F56 2210 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 H3BT86 120 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 ELANEP08246 267 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 GP9P14770 177 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 NDUFA1O15239 70 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 OBSL1O75147 1896 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 C16orf54Q6UWD8 224 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 C11orf1Q9H5F2 150 aa8.54□□□□□ -1.04
GTF3C1-201ENST00000356183 PIK3CD-AS1Q5SR53 167 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 Q8N1Y9 231 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 BPY2O14599 106 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 UQCRQO14949 82 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 FRMD6-AS1P0C7T7 363 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 ODF1Q14990 250 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 WFDC10BQ8IUB3 73 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 HHLA3Q9XRX5 114 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 SPRNQ5BIV9 151 aa8.53□□□□□ -1.04
GTF3C1-201ENST00000356183 SLPIP03973 132 aa8.52□□□□□ -1.04
GTF3C1-201ENST00000356183 COX7BP24311 80 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 TMEM263Q8WUH6 116 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 PRAC2D3DTV9 90 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 C2orf70A6NJV1 201 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 SNURFQ9Y675 71 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 KIF26AQ9ULI4 1882 aaPredicted RBP8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 TRBV7-3A0A075B6L6 115 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 PLXNA2O75051 1894 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 DEFB112Q30KQ8 113 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 HIST2H2BDQ6DRA6 164 aa8.52□□□□□ -1.05
GTF3C1-201ENST00000356183 CEMP1Q6PRD7 247 aaPredicted RBP8.51□□□□□ -1.05
GTF3C1-201ENST00000356183 Q6ZS92 163 aa8.51□□□□□ -1.05
GTF3C1-201ENST00000356183 USP17L23D6RBM5 183 aa8.51□□□□□ -1.05
GTF3C1-201ENST00000356183 H3BUA1 57 aa8.51□□□□□ -1.05
GTF3C1-201ENST00000356183 DEFB4AO15263 64 aa8.51□□□□□ -1.05
GTF3C1-201ENST00000356183 I3L2K1 104 aa8.51□□□□□ -1.05
GTF3C1-201ENST00000356183 PIFOQ8TCI5 191 aa8.51□□□□□ -1.05
GTF3C1-201ENST00000356183 FANCD2OSQ96PS1 177 aa8.51□□□□□ -1.05
GTF3C1-201ENST00000356183 MIAQ16674 131 aa8.5□□□□□ -1.05
GTF3C1-201ENST00000356183 Q6ZSR3 168 aa8.5□□□□□ -1.05
GTF3C1-201ENST00000356183 PRSS33Q8NF86 280 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms