RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 HIST1H2BHQ93079 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST1H2BNQ99877 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 HIST1H2BMQ99879 126 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 LGALS9O00182 355 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 PLP1P60201 277 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 CTAG1AP78358 180 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 MORN5Q5VZ52 161 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 ATG2AQ2TAZ0 1938 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.42□□□□□ -1.22
GABPA-201ENST00000354828 A0A0J9YX75 114 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 IGKV2-29A2NJV5 120 aaPredicted RBP7.42□□□□□ -1.22
GABPA-201ENST00000354828 EBI3Q14213 229 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 FAM231DQ6ZW35 169 aa7.42□□□□□ -1.22
GABPA-201ENST00000354828 ZC2HC1BQ5TFG8 222 aa7.41□□□□□ -1.22
GABPA-201ENST00000354828 NDUFAF3Q9BU61 184 aa7.41□□□□□ -1.22
GABPA-201ENST00000354828 TYMSP04818 313 aa7.41□□□□□ -1.22
GABPA-201ENST00000354828 PKIGQ9Y2B9 76 aa7.41□□□□□ -1.22
GABPA-201ENST00000354828 LY6LH3BQJ8 138 aa7.41□□□□□ -1.22
GABPA-201ENST00000354828 SMIM2Q9BVW6 85 aa7.41□□□□□ -1.22
GABPA-201ENST00000354828 TMEM263Q8WUH6 116 aaKnown RBP7.41□□□□□ -1.22
GABPA-201ENST00000354828 SETD2Q9BYW2 2564 aaPredicted RBP7.4□□□□□ -1.22
GABPA-201ENST00000354828 ZNF48Q96MX3 618 aaPredicted RBP7.4□□□□□ -1.22
GABPA-201ENST00000354828 EDA2RQ9HAV5 297 aa7.4□□□□□ -1.22
GABPA-201ENST00000354828 ARHGAP32A7KAX9 2087 aa7.4□□□□□ -1.22
GABPA-201ENST00000354828 DEFB131BA0A096LNP1 70 aa7.4□□□□□ -1.23
GABPA-201ENST00000354828 A8MWP6 167 aa7.4□□□□□ -1.23
GABPA-201ENST00000354828 C20orf144Q9BQM9 153 aa7.4□□□□□ -1.23
GABPA-201ENST00000354828 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.23
GABPA-201ENST00000354828 Q6ZWC4 215 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 C11orf52Q96A22 123 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 PRO0255Q9UI72 69 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 RPL18AQ02543 176 aaKnown RBP7.39□□□□□ -1.23
GABPA-201ENST00000354828 IL15RAQ13261 267 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 C15orf53Q8NAA6 179 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 NPYP01303 97 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 FAM222AQ5U5X8 452 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 C9orf47Q6ZRZ4 202 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 C5orf38Q86SI9 138 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 DNAJC30Q96LL9 226 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 CAMK2N2Q96S95 79 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 C20orf78Q9BR46 151 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 TMEM126AQ9H061 195 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 V9GYV3 84 aa7.39□□□□□ -1.23
GABPA-201ENST00000354828 A0A1B0GV72 72 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 NDUFA7O95182 113 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 DDTP30046 118 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 HERVK_113P63121 156 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 DAZ2Q13117 558 aaKnown RBP7.38□□□□□ -1.23
GABPA-201ENST00000354828 ZFAND6Q6FIF0 208 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 Q6ZS46 218 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
GABPA-201ENST00000354828 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
GABPA-201ENST00000354828 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
GABPA-201ENST00000354828 C18orf65Q6ZTR6 163 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 KIAA1549Q9HCM3 1950 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 TRAV26-1A0A087WT03 109 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 PSMB8P28062 276 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 KLK12Q9UKR0 248 aa7.38□□□□□ -1.23
GABPA-201ENST00000354828 KMT2EQ8IZD2 1858 aa7.37□□□□□ -1.23
GABPA-201ENST00000354828 ZNF503Q96F45 646 aa7.37□□□□□ -1.23
GABPA-201ENST00000354828 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
GABPA-201ENST00000354828 VSIG2Q96IQ7 327 aa7.37□□□□□ -1.23
GABPA-201ENST00000354828 SMIM9A6NGZ8 99 aa7.37□□□□□ -1.23
GABPA-201ENST00000354828 K7EQG2 157 aa7.37□□□□□ -1.23
GABPA-201ENST00000354828 SYS1-DBNDD2H3BUS1 97 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 ESDP10768 282 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 TRBV7-3A0A075B6L6 115 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 C9JQL5 133 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 A0A087X0K7 114 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 A0A1B0GWB2 263 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 ZNF124Q15973 351 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 ORAOV1Q8WV07 137 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 KLF12Q9Y4X4 402 aa7.36□□□□□ -1.23
GABPA-201ENST00000354828 hDV102S1A0JD36 115 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 MDFICQ9P1T7 246 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 A0A0C4DFX4 3053 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 GAGE2EQ4V326 116 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 FAM167A-AS1Q96KT0 104 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 GAGE2DQ9UEU5 116 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 MIFP14174 115 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 C18orf32Q8TCD1 76 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 MTORP42345 2549 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 BRCA2P51587 3418 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 LYRM9A8MSI8 78 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 COX7A2LO14548 114 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 TIRAPP58753 221 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 NDUFA12Q9UI09 145 aa7.35□□□□□ -1.23
GABPA-201ENST00000354828 COLCA2A8K830 154 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 CRYGBP07316 175 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 C3orf79P0CE67 100 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 RPL39LQ96EH5 51 aaKnown RBP7.34□□□□□ -1.23
GABPA-201ENST00000354828 C5orf42Q9H799 3197 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 C2CD3Q4AC94 2353 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 LY6G6CO95867 125 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 Q6ZTI0 123 aa7.34□□□□□ -1.23
GABPA-201ENST00000354828 SNHG12Q9BXW3 62 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms