RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 Q8N1Y9 231 aa16.52■□□□□ 0.24
NKX2-1-201ENST00000354822 A0A087WWL8 130 aa16.51■□□□□ 0.23
NKX2-1-201ENST00000354822 TTTY13Q9BZ97 58 aa16.51■□□□□ 0.23
NKX2-1-201ENST00000354822 MDFICQ9P1T7 246 aa16.51■□□□□ 0.23
NKX2-1-201ENST00000354822 TRAV2A0A0B4J234 112 aa16.5■□□□□ 0.23
NKX2-1-201ENST00000354822 TAL2Q16559 108 aa16.5■□□□□ 0.23
NKX2-1-201ENST00000354822 AMTNQ6UX39 209 aa16.5■□□□□ 0.23
NKX2-1-201ENST00000354822 ZFP2Q6ZN57 461 aa16.5■□□□□ 0.23
NKX2-1-201ENST00000354822 POLQO75417 2590 aa16.5■□□□□ 0.23
NKX2-1-201ENST00000354822 TRGV11A0A075B6L2 103 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 TRBV27A0A0K0K1C4 114 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 PRSS29PA6NIE9 313 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 LINC01619G3V211 115 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 SMIM13P0DJ93 91 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 GCSHP23434 173 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 GTF2H5Q6ZYL4 71 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 TM2D2Q9BX73 214 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 PEMTQ9UBM1 199 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 PTPN13Q12923 2485 aa16.49■□□□□ 0.23
NKX2-1-201ENST00000354822 GAGE10A6NGK3 116 aa16.48■□□□□ 0.23
NKX2-1-201ENST00000354822 SDHAF1A6NFY7 115 aa16.48■□□□□ 0.23
NKX2-1-201ENST00000354822 TMEM141Q96I45 108 aa16.48■□□□□ 0.23
NKX2-1-201ENST00000354822 OR11H12B2RN74 326 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 TEX29Q8N6K0 151 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 MAPKAPK5-AS1Q8N8E1 139 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 OR11H1Q8NG94 326 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 OR11H2Q8NH07 326 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 CSMD2Q7Z408 3487 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 CRYGDP07320 174 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 SLURP1P55000 103 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 PAPPA-AS1Q5QFB9 102 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 FAM74A4Q5TZK3 123 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 NEGR1Q7Z3B1 354 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 CEND1Q8N111 149 aa16.47■□□□□ 0.23
NKX2-1-201ENST00000354822 H3BUT2 72 aa16.46■□□□□ 0.23
NKX2-1-201ENST00000354822 TMEM86BQ8N661 226 aa16.46■□□□□ 0.23
NKX2-1-201ENST00000354822 C4orf3Q8WVX3 66 aa16.46■□□□□ 0.23
NKX2-1-201ENST00000354822 TP53TG1Q9Y2A0 90 aa16.46■□□□□ 0.23
NKX2-1-201ENST00000354822 IGIPA6NJ69 53 aa16.45■□□□□ 0.22
NKX2-1-201ENST00000354822 RIPPLY3P57055 190 aa16.45■□□□□ 0.22
NKX2-1-201ENST00000354822 M0QY20 66 aa16.45■□□□□ 0.22
NKX2-1-201ENST00000354822 ZNF56Q15929 161 aa16.45■□□□□ 0.22
NKX2-1-201ENST00000354822 TRPT1Q86TN4 253 aaKnown RBP16.45■□□□□ 0.22
NKX2-1-201ENST00000354822 TIMM17AQ99595 171 aa16.45■□□□□ 0.22
NKX2-1-201ENST00000354822 DOPEY2Q9Y3R5 2298 aa16.45■□□□□ 0.22
NKX2-1-201ENST00000354822 A8MTW9 85 aa16.44■□□□□ 0.22
NKX2-1-201ENST00000354822 PLA2G2AP14555 144 aa16.44■□□□□ 0.22
NKX2-1-201ENST00000354822 FXYD2P54710 66 aa16.44■□□□□ 0.22
NKX2-1-201ENST00000354822 MYMXA0A1B0GTQ4 84 aa16.44■□□□□ 0.22
NKX2-1-201ENST00000354822 E9PLD3 99 aa16.44■□□□□ 0.22
NKX2-1-201ENST00000354822 ZNF876PQ49A33 203 aa16.44■□□□□ 0.22
NKX2-1-201ENST00000354822 ZNF256Q9Y2P7 627 aaPredicted RBP16.44■□□□□ 0.22
NKX2-1-201ENST00000354822 PMVKQ15126 192 aa16.43■□□□□ 0.22
NKX2-1-201ENST00000354822 DEFB136Q30KP8 78 aa16.43■□□□□ 0.22
NKX2-1-201ENST00000354822 C18orf65Q6ZTR6 163 aa16.43■□□□□ 0.22
NKX2-1-201ENST00000354822 RAB37Q96AX2 223 aa16.43■□□□□ 0.22
NKX2-1-201ENST00000354822 CBY1Q9Y3M2 126 aa16.43■□□□□ 0.22
NKX2-1-201ENST00000354822 NAV2Q8IVL1 2488 aa16.43■□□□□ 0.22
NKX2-1-201ENST00000354822 DEFB131AP59861 70 aa16.43■□□□□ 0.22
NKX2-1-201ENST00000354822 JMJD8Q96S16 334 aa16.43■□□□□ 0.22
NKX2-1-201ENST00000354822 J3QKU1 62 aa16.42■□□□□ 0.22
NKX2-1-201ENST00000354822 GAGE12BA1L429 117 aa16.41■□□□□ 0.22
NKX2-1-201ENST00000354822 TSHBP01222 138 aa16.41■□□□□ 0.22
NKX2-1-201ENST00000354822 RHOHQ15669 191 aa16.41■□□□□ 0.22
NKX2-1-201ENST00000354822 HIST2H2BCQ6DN03 193 aa16.41■□□□□ 0.22
NKX2-1-201ENST00000354822 UFSP1Q6NVU6 142 aa16.41■□□□□ 0.22
NKX2-1-201ENST00000354822 WFDC11Q8NEX6 87 aa16.41■□□□□ 0.22
NKX2-1-201ENST00000354822 A0A1W2PPM0 123 aa16.41■□□□□ 0.22
NKX2-1-201ENST00000354822 H3BMM0 161 aa16.41■□□□□ 0.22
NKX2-1-201ENST00000354822 KNCNA6PVL3 124 aa16.4■□□□□ 0.22
NKX2-1-201ENST00000354822 K7EP34 96 aa16.4■□□□□ 0.22
NKX2-1-201ENST00000354822 RNASE8Q8TDE3 154 aaKnown RBP16.4■□□□□ 0.22
NKX2-1-201ENST00000354822 AGRNO00468 2067 aa16.4■□□□□ 0.22
NKX2-1-201ENST00000354822 CST9LQ9H4G1 147 aa16.4■□□□□ 0.22
NKX2-1-201ENST00000354822 NSUN5P1Q3KNT7 163 aa16.39■□□□□ 0.21
NKX2-1-201ENST00000354822 MORN3Q6PF18 240 aaPredicted RBP16.39■□□□□ 0.21
NKX2-1-201ENST00000354822 HIST1H4GQ99525 98 aa16.39■□□□□ 0.21
NKX2-1-201ENST00000354822 ZANQ9Y493 2812 aa16.39■□□□□ 0.21
NKX2-1-201ENST00000354822 ABCA12Q86UK0 2595 aa16.39■□□□□ 0.21
NKX2-1-201ENST00000354822 FABP2P12104 132 aa16.38■□□□□ 0.21
NKX2-1-201ENST00000354822 SAMD5Q5TGI4 173 aa16.38■□□□□ 0.21
NKX2-1-201ENST00000354822 PRADC1Q9BSG0 188 aa16.38■□□□□ 0.21
NKX2-1-201ENST00000354822 HERVK_113P61574 105 aa16.38■□□□□ 0.21
NKX2-1-201ENST00000354822 RPL39P62891 51 aaKnown RBP16.38■□□□□ 0.21
NKX2-1-201ENST00000354822 EDA2RQ9HAV5 297 aa16.38■□□□□ 0.21
NKX2-1-201ENST00000354822 KHDC1LQ5JSQ8 128 aa16.37■□□□□ 0.21
NKX2-1-201ENST00000354822 PIK3CD-AS1Q5SR53 167 aa16.37■□□□□ 0.21
NKX2-1-201ENST00000354822 TMEM61Q8N0U2 210 aa16.37■□□□□ 0.21
NKX2-1-201ENST00000354822 OR5A1Q8NGJ0 315 aa16.37■□□□□ 0.21
NKX2-1-201ENST00000354822 DYNLRB2Q8TF09 96 aa16.37■□□□□ 0.21
NKX2-1-201ENST00000354822 I3L3M4 83 aa16.37■□□□□ 0.21
NKX2-1-201ENST00000354822 NHP2Q9NX24 153 aaKnown RBP16.37■□□□□ 0.21
NKX2-1-201ENST00000354822 CENPEQ02224 2701 aa16.36■□□□□ 0.21
NKX2-1-201ENST00000354822 IGLV4-69A0A075B6H9 119 aa16.36■□□□□ 0.21
NKX2-1-201ENST00000354822 RBMY1A1P0DJD3 496 aaKnown RBP16.36■□□□□ 0.21
NKX2-1-201ENST00000354822 RBMY1CP0DJD4 496 aa16.36■□□□□ 0.21
NKX2-1-201ENST00000354822 RBMY1FQ15415 496 aaKnown RBP16.36■□□□□ 0.21
NKX2-1-201ENST00000354822 KLHL30-AS1Q8NEE0 82 aa16.36■□□□□ 0.21
NKX2-1-201ENST00000354822 PHLDA1Q8WV24 401 aaPredicted RBP16.36■□□□□ 0.21
NKX2-1-201ENST00000354822 DLX4Q92988 240 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms