RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 G3V3Q6 166 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 LGALSLQ3ZCW2 172 aaPredicted RBP10.37□□□□□ -0.75
DDX55-202ENST00000354291 LELP1Q5T871 98 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 COX8CQ7Z4L0 72 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 Q86TA4 180 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 STOML3Q8TAV4 291 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 FMC1Q96HJ9 113 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 TCEAL7Q9BRU2 100 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 MAP1LC3BQ9GZQ8 125 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 CYTL1Q9NRR1 136 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 FHITP49789 147 aa10.36□□□□□ -0.75
DDX55-202ENST00000354291 UBE2G1P62253 170 aa10.36□□□□□ -0.75
DDX55-202ENST00000354291 PARLQ9H300 379 aa10.36□□□□□ -0.75
DDX55-202ENST00000354291 DNLZQ5SXM8 178 aa10.35□□□□□ -0.75
DDX55-202ENST00000354291 FAM162BQ5T6X4 162 aa10.35□□□□□ -0.75
DDX55-202ENST00000354291 ZC2HC1AQ96GY0 325 aa10.35□□□□□ -0.75
DDX55-202ENST00000354291 KRBOX1C9JBD0 128 aa10.34□□□□□ -0.75
DDX55-202ENST00000354291 CRIP1P50238 77 aa10.34□□□□□ -0.75
DDX55-202ENST00000354291 LAGE3Q14657 143 aa10.34□□□□□ -0.75
DDX55-202ENST00000354291 CST9LP1Q5W188 147 aa10.34□□□□□ -0.75
DDX55-202ENST00000354291 TRBV6-1A0A0K0K1D8 114 aa10.33□□□□□ -0.76
DDX55-202ENST00000354291 SH2D1AO60880 128 aa10.33□□□□□ -0.76
DDX55-202ENST00000354291 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
DDX55-202ENST00000354291 ZNF345Q14585 488 aa10.33□□□□□ -0.76
DDX55-202ENST00000354291 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
DDX55-202ENST00000354291 Q8N3U1 123 aa10.33□□□□□ -0.76
DDX55-202ENST00000354291 Q8N976 141 aa10.33□□□□□ -0.76
DDX55-202ENST00000354291 TRAV8-3A0A0A6YYJ7 113 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 H3BVH4 76 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 M0R036 132 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 RHODO00212 210 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 LTAP01374 205 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 SEC11BP0C7V7 166 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 GAGE1Q13065 139 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 GAGE4Q13068 117 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 GAGE5Q13069 117 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 ZNF674Q2M3X9 581 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 UFSP1Q6NVU6 142 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 KCNRGQ8N5I3 272 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 OR11H4Q8NGC9 324 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 JPT2Q9H910 190 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 PHLDA3Q9Y5J5 127 aa10.32□□□□□ -0.76
DDX55-202ENST00000354291 A0A087WWC5 75 aa10.31□□□□□ -0.76
DDX55-202ENST00000354291 GRIFINA4D1Z8 144 aa10.31□□□□□ -0.76
DDX55-202ENST00000354291 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
DDX55-202ENST00000354291 SMLR1H3BR10 107 aa10.31□□□□□ -0.76
DDX55-202ENST00000354291 SFT2D1Q8WV19 159 aa10.31□□□□□ -0.76
DDX55-202ENST00000354291 SAMD10Q9BYL1 202 aa10.31□□□□□ -0.76
DDX55-202ENST00000354291 A0A0D9SG52 128 aa10.3□□□□□ -0.76
DDX55-202ENST00000354291 HMSDA8MTL9 139 aa10.3□□□□□ -0.76
DDX55-202ENST00000354291 PAGE4O60829 102 aa10.3□□□□□ -0.76
DDX55-202ENST00000354291 S100A9P06702 114 aaKnown RBP10.3□□□□□ -0.76
DDX55-202ENST00000354291 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
DDX55-202ENST00000354291 TPT1P13693 172 aaKnown RBP10.3□□□□□ -0.76
DDX55-202ENST00000354291 AKR1C3P42330 323 aa10.3□□□□□ -0.76
DDX55-202ENST00000354291 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
DDX55-202ENST00000354291 MBD3L1Q8WWY6 194 aa10.3□□□□□ -0.76
DDX55-202ENST00000354291 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
DDX55-202ENST00000354291 Q6ZRU5 148 aa10.29□□□□□ -0.76
DDX55-202ENST00000354291 DAZ4Q86SG3 579 aaKnown RBP10.29□□□□□ -0.76
DDX55-202ENST00000354291 C14orf178Q8N769 122 aaPredicted RBP10.29□□□□□ -0.76
DDX55-202ENST00000354291 FAM213BQ8TBF2 198 aa10.29□□□□□ -0.76
DDX55-202ENST00000354291 SFRP2Q96HF1 295 aa10.29□□□□□ -0.76
DDX55-202ENST00000354291 DAZ3Q9NR90 486 aaKnown RBP10.29□□□□□ -0.76
DDX55-202ENST00000354291 KANTRA0A1W2PQU2 76 aa10.28□□□□□ -0.76
DDX55-202ENST00000354291 EIF5AP63241 154 aaKnown RBP10.28□□□□□ -0.76
DDX55-202ENST00000354291 TOR2AQ5JU69 321 aa10.28□□□□□ -0.76
DDX55-202ENST00000354291 ZFP82Q8N141 532 aa10.28□□□□□ -0.76
DDX55-202ENST00000354291 ZNF471Q9BX82 626 aaPredicted RBP10.28□□□□□ -0.76
DDX55-202ENST00000354291 Q9UF83 564 aa10.28□□□□□ -0.76
DDX55-202ENST00000354291 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
DDX55-202ENST00000354291 TMSB15BA0A087X1C1 80 aa10.27□□□□□ -0.77
DDX55-202ENST00000354291 M0R381 172 aa10.27□□□□□ -0.77
DDX55-202ENST00000354291 PFDN1O60925 122 aa10.27□□□□□ -0.77
DDX55-202ENST00000354291 GAS8-AS1O95177 125 aa10.27□□□□□ -0.77
DDX55-202ENST00000354291 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
DDX55-202ENST00000354291 A0A087WWL8 130 aa10.26□□□□□ -0.77
DDX55-202ENST00000354291 BCL2L11O43521 198 aa10.26□□□□□ -0.77
DDX55-202ENST00000354291 H2AFB1P0C5Y9 115 aa10.26□□□□□ -0.77
DDX55-202ENST00000354291 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
DDX55-202ENST00000354291 A0A1B0GV50 99 aa10.25□□□□□ -0.77
DDX55-202ENST00000354291 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
DDX55-202ENST00000354291 RMI2Q96E14 147 aa10.25□□□□□ -0.77
DDX55-202ENST00000354291 DPH3P1Q9H4G8 78 aa10.25□□□□□ -0.77
DDX55-202ENST00000354291 URGCP-MRPS24S4R325 110 aa10.25□□□□□ -0.77
DDX55-202ENST00000354291 SCO2A0A1W2PP80 73 aa10.24□□□□□ -0.77
DDX55-202ENST00000354291 RPL36AP83881 106 aaKnown RBP10.24□□□□□ -0.77
DDX55-202ENST00000354291 ODF1Q14990 250 aa10.24□□□□□ -0.77
DDX55-202ENST00000354291 RPL36ALQ969Q0 106 aaKnown RBP10.24□□□□□ -0.77
DDX55-202ENST00000354291 DNAJC30Q96LL9 226 aa10.24□□□□□ -0.77
DDX55-202ENST00000354291 MLST8Q9BVC4 326 aa10.24□□□□□ -0.77
DDX55-202ENST00000354291 CXCL1P09341 107 aa10.23□□□□□ -0.77
DDX55-202ENST00000354291 TMUB2Q71RG4 321 aa10.23□□□□□ -0.77
DDX55-202ENST00000354291 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
DDX55-202ENST00000354291 RAB4BP61018 213 aa10.22□□□□□ -0.77
DDX55-202ENST00000354291 NIT1Q86X76 327 aa10.22□□□□□ -0.77
DDX55-202ENST00000354291 RPL19P84098 196 aaKnown RBP10.21□□□□□ -0.77
DDX55-202ENST00000354291 ELOBQ15370 118 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms