RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 TEX48A0A1B0GUV7 120 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 RNF223E7ERA6 249 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 PRM2P04554 102 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 TMEM170BQ5T4T1 132 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 SYNJ2BPP57105 145 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 BAALCQ8WXS3 180 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 IGHG2P01859 326 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 WFDC2Q14508 124 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 C12orf74Q32Q52 190 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 MDFICQ9P1T7 246 aa12.37□□□□□ -0.43
TRIM9-202ENST00000338969 PLEKHB2Q96CS7 222 aa12.36□□□□□ -0.43
TRIM9-202ENST00000338969 SOCS3O14543 225 aa12.36□□□□□ -0.43
TRIM9-202ENST00000338969 PLNP26678 52 aa12.36□□□□□ -0.43
TRIM9-202ENST00000338969 HLA-DRB4P13762 266 aa12.36□□□□□ -0.43
TRIM9-202ENST00000338969 HLA-DRB4X5D2U9 266 aa12.36□□□□□ -0.43
TRIM9-202ENST00000338969 LOC107984156A0A0G2JMH3 177 aa12.35□□□□□ -0.43
TRIM9-202ENST00000338969 A6NDX4 124 aa12.35□□□□□ -0.43
TRIM9-202ENST00000338969 ARL17AQ8IVW1 177 aa12.35□□□□□ -0.43
TRIM9-202ENST00000338969 BEX4Q9NWD9 120 aaPredicted RBP12.35□□□□□ -0.43
TRIM9-202ENST00000338969 IGLL5B9A064 214 aa12.35□□□□□ -0.43
TRIM9-202ENST00000338969 USMG5Q96IX5 58 aa12.35□□□□□ -0.43
TRIM9-202ENST00000338969 B4DSR2 109 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 ETDBQ3ZM63 59 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 SUMO4Q6EEV6 95 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 DUX3Q96PT4 197 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 CHD6Q8TD26 2715 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 FLNAP21333 2647 aaKnown RBP12.34□□□□□ -0.43
TRIM9-202ENST00000338969 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 DEFB136Q30KP8 78 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 C19orf54Q5BKX5 351 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 C11orf44Q8N8P7 122 aa12.34□□□□□ -0.43
TRIM9-202ENST00000338969 TOMM6Q96B49 74 aa12.33□□□□□ -0.44
TRIM9-202ENST00000338969 SDHAF1A6NFY7 115 aa12.33□□□□□ -0.44
TRIM9-202ENST00000338969 C11orf86A6NJI1 115 aa12.33□□□□□ -0.44
TRIM9-202ENST00000338969 KNCNA6PVL3 124 aa12.33□□□□□ -0.44
TRIM9-202ENST00000338969 ID1P41134 155 aa12.33□□□□□ -0.44
TRIM9-202ENST00000338969 OR5A1Q8NGJ0 315 aa12.33□□□□□ -0.44
TRIM9-202ENST00000338969 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
TRIM9-202ENST00000338969 IGHV4-4A0A075B6R2 117 aa12.32□□□□□ -0.44
TRIM9-202ENST00000338969 H7C2G1 150 aa12.32□□□□□ -0.44
TRIM9-202ENST00000338969 LGALS1P09382 135 aaKnown RBP12.32□□□□□ -0.44
TRIM9-202ENST00000338969 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
TRIM9-202ENST00000338969 LINC01546A6NGU7 62 aa12.32□□□□□ -0.44
TRIM9-202ENST00000338969 KRTAP10-9P60411 292 aa12.32□□□□□ -0.44
TRIM9-202ENST00000338969 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
TRIM9-202ENST00000338969 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
TRIM9-202ENST00000338969 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
TRIM9-202ENST00000338969 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
TRIM9-202ENST00000338969 LENEPQ9Y5L5 61 aa12.31□□□□□ -0.44
TRIM9-202ENST00000338969 RNASE13Q5GAN3 156 aaKnown RBP12.31□□□□□ -0.44
TRIM9-202ENST00000338969 GTSF1LQ9H1H1 148 aa12.31□□□□□ -0.44
TRIM9-202ENST00000338969 PHLDA1Q8WV24 401 aaPredicted RBP12.3□□□□□ -0.44
TRIM9-202ENST00000338969 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
TRIM9-202ENST00000338969 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
TRIM9-202ENST00000338969 COX6B1P14854 86 aa12.3□□□□□ -0.44
TRIM9-202ENST00000338969 ZNF418Q8TF45 676 aaPredicted RBP12.3□□□□□ -0.44
TRIM9-202ENST00000338969 HIVEP2P31629 2446 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 HIST2H2BCQ6DN03 193 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 ZFP2Q6ZN57 461 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 Q8N1Y9 231 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 TM2D2Q9BX73 214 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 FN1P02751 2386 aaKnown RBP12.29□□□□□ -0.44
TRIM9-202ENST00000338969 P0DMU3 169 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 FAM231AP0DMU4 169 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 FAM231CP0DMU5 169 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 ITPR3Q14573 2671 aa12.29□□□□□ -0.44
TRIM9-202ENST00000338969 G3V4G9 280 aa12.28□□□□□ -0.44
TRIM9-202ENST00000338969 A0A1B0GWB2 263 aa12.27□□□□□ -0.45
TRIM9-202ENST00000338969 ADARB2-AS1A8MUL3 147 aa12.27□□□□□ -0.45
TRIM9-202ENST00000338969 HOXA3O43365 443 aaPredicted RBP12.27□□□□□ -0.45
TRIM9-202ENST00000338969 TSHBP01222 138 aa12.27□□□□□ -0.45
TRIM9-202ENST00000338969 ZNF876PQ49A33 203 aa12.27□□□□□ -0.45
TRIM9-202ENST00000338969 C18orf65Q6ZTR6 163 aa12.27□□□□□ -0.45
TRIM9-202ENST00000338969 DCANP1Q8TF63 244 aa12.27□□□□□ -0.45
TRIM9-202ENST00000338969 PSMB2P49721 201 aa12.27□□□□□ -0.45
TRIM9-202ENST00000338969 TRBV7-3A0A075B6L6 115 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 NDUFS8O00217 210 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 INSL3P51460 131 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 SNRPD3P62318 126 aaKnown RBP12.26□□□□□ -0.45
TRIM9-202ENST00000338969 TRAV12-1A0A0B4J245 112 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 E9PLD3 99 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 CRYGDP07320 174 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 PROK1P58294 105 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 SMAGPQ0VAQ4 97 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 RRN3P1Q2M238 152 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 KLK9Q2XQG4 91 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 A0A087WW49 117 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 LINC00315P59091 139 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 FOXI2Q6ZQN5 318 aa12.26□□□□□ -0.45
TRIM9-202ENST00000338969 TSSC4Q9Y5U2 329 aaPredicted RBP12.26□□□□□ -0.45
TRIM9-202ENST00000338969 IGLV1-40P01703 118 aa12.25□□□□□ -0.45
TRIM9-202ENST00000338969 FASNP49327 2511 aaKnown RBP12.25□□□□□ -0.45
TRIM9-202ENST00000338969 VCYO14598 125 aa12.25□□□□□ -0.45
TRIM9-202ENST00000338969 CEMP1Q6PRD7 247 aaPredicted RBP12.25□□□□□ -0.45
TRIM9-202ENST00000338969 NIPBLQ6KC79 2804 aaeCLIP12.25□□□□□ -0.45
TRIM9-202ENST00000338969 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
TRIM9-202ENST00000338969 HECTD1Q9ULT8 2610 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms