RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 ERG28Q9UKR5 140 aa8.98□□□□□ -0.97
RBM39-202ENST00000338163 CELSR1Q9NYQ6 3014 aa8.97□□□□□ -0.97
RBM39-202ENST00000338163 CFC1BP0CG36 223 aa8.97□□□□□ -0.97
RBM39-202ENST00000338163 CFC1P0CG37 223 aa8.97□□□□□ -0.97
RBM39-202ENST00000338163 ASIPP42127 132 aa8.97□□□□□ -0.97
RBM39-202ENST00000338163 RPL39P62891 51 aaKnown RBP8.97□□□□□ -0.97
RBM39-202ENST00000338163 CCDC140Q96MF4 163 aa8.97□□□□□ -0.97
RBM39-202ENST00000338163 IGHV4-4A0A075B6R2 117 aa8.97□□□□□ -0.97
RBM39-202ENST00000338163 LY6G5BQ8NDX9 201 aa8.97□□□□□ -0.97
RBM39-202ENST00000338163 TIMD4Q96H15 378 aa8.97□□□□□ -0.97
RBM39-202ENST00000338163 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.97
RBM39-202ENST00000338163 B5MCH6 92 aa8.96□□□□□ -0.97
RBM39-202ENST00000338163 RNASE4P34096 147 aaKnown RBP8.96□□□□□ -0.97
RBM39-202ENST00000338163 C9orf47Q6ZRZ4 202 aa8.96□□□□□ -0.97
RBM39-202ENST00000338163 TRPT1Q86TN4 253 aaKnown RBP8.96□□□□□ -0.97
RBM39-202ENST00000338163 C10orf126Q8N4M7 172 aa8.96□□□□□ -0.97
RBM39-202ENST00000338163 UBTD1Q9HAC8 227 aa8.96□□□□□ -0.97
RBM39-202ENST00000338163 LINC00527Q9UJ94 153 aa8.96□□□□□ -0.97
RBM39-202ENST00000338163 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.98
RBM39-202ENST00000338163 ODF3BA8MYP8 253 aa8.96□□□□□ -0.98
RBM39-202ENST00000338163 F5H697 171 aa8.96□□□□□ -0.98
RBM39-202ENST00000338163 GNRH2O43555 120 aa8.96□□□□□ -0.98
RBM39-202ENST00000338163 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.98
RBM39-202ENST00000338163 Q1RN00 199 aa8.96□□□□□ -0.98
RBM39-202ENST00000338163 Q8N9W7 124 aa8.96□□□□□ -0.98
RBM39-202ENST00000338163 FBN2P35556 2912 aa8.96□□□□□ -0.98
RBM39-202ENST00000338163 SLC25A20O43772 301 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 CRYGDP07320 174 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 CRIP2P52943 208 aaPredicted RBP8.95□□□□□ -0.98
RBM39-202ENST00000338163 C20orf173Q96LM9 149 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 PRO1854Q9UHT4 67 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 F6UB75 175 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 BEX4Q9NWD9 120 aaPredicted RBP8.95□□□□□ -0.98
RBM39-202ENST00000338163 CSMD2Q7Z408 3487 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 IGLV4-69A0A075B6H9 119 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 TRAV21A0A0B4J279 112 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 OR10J6PQ8NGY7 276 aa8.95□□□□□ -0.98
RBM39-202ENST00000338163 FAM110DQ8TAY7 271 aaPredicted RBP8.95□□□□□ -0.98
RBM39-202ENST00000338163 IGHV3-30P01768 117 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 IGHV3-30-5P0DP03 117 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 A0A087WWL8 130 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 TRAV2A0A0B4J234 112 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 RNF223E7ERA6 249 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 TSHBP01222 138 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
RBM39-202ENST00000338163 HIST2H2BCQ6DN03 193 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 Q8N6K4 173 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 EEF1AKMT3Q96AZ1 226 aa8.94□□□□□ -0.98
RBM39-202ENST00000338163 A4D1N5 150 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 M0R1W7 72 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 SNCGO76070 127 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 PMVKQ15126 192 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 FAM74A4Q5TZK3 123 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 JPT2Q9H910 190 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 NOTCH2Q04721 2471 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 NAV2Q8IVL1 2488 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 TMEM262E9PQX1 116 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 IGHV4-39P01824 125 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 ZFAND2AQ8N6M9 145 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 VCX2Q9H322 139 aa8.93□□□□□ -0.98
RBM39-202ENST00000338163 ZNF256Q9Y2P7 627 aaPredicted RBP8.93□□□□□ -0.98
RBM39-202ENST00000338163 ZFHX3Q15911 3703 aa8.92□□□□□ -0.98
RBM39-202ENST00000338163 J3QQQ9 107 aa8.92□□□□□ -0.98
RBM39-202ENST00000338163 GAGE2BQ13066 116 aa8.92□□□□□ -0.98
RBM39-202ENST00000338163 GAGE5Q13069 117 aa8.92□□□□□ -0.98
RBM39-202ENST00000338163 GAGE6Q13070 117 aa8.92□□□□□ -0.98
RBM39-202ENST00000338163 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
RBM39-202ENST00000338163 SLC25A29Q8N8R3 303 aa8.92□□□□□ -0.98
RBM39-202ENST00000338163 NTN5Q8WTR8 489 aaPredicted RBP8.92□□□□□ -0.98
RBM39-202ENST00000338163 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
RBM39-202ENST00000338163 FLNBO75369 2602 aaKnown RBP8.92□□□□□ -0.98
RBM39-202ENST00000338163 APCP25054 2843 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 C9orf139Q6ZV77 190 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 ZNRF2Q8NHG8 242 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 MRPL53Q96EL3 112 aaKnown RBP8.91□□□□□ -0.98
RBM39-202ENST00000338163 OPRPNQ99935 248 aaPredicted RBP8.91□□□□□ -0.98
RBM39-202ENST00000338163 UNC79Q9P2D8 2635 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 TRAV4A0A0B4J268 109 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 TMEM219Q86XT9 240 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 GPHB5Q86YW7 130 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 NRGNQ92686 78 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 AJUBAQ96IF1 538 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 NBPF19A0A087WUL8 3843 aa8.91□□□□□ -0.98
RBM39-202ENST00000338163 ITPR2Q14571 2701 aa8.9□□□□□ -0.98
RBM39-202ENST00000338163 CREBBPQ92793 2442 aa8.9□□□□□ -0.98
RBM39-202ENST00000338163 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
RBM39-202ENST00000338163 CRLF1O75462 422 aa8.9□□□□□ -0.98
RBM39-202ENST00000338163 SRD5A1P18405 259 aa8.9□□□□□ -0.98
RBM39-202ENST00000338163 ZFP36P26651 326 aaKnown RBP8.9□□□□□ -0.98
RBM39-202ENST00000338163 UNQ9165/PRO28630Q6UXU0 137 aa8.9□□□□□ -0.98
RBM39-202ENST00000338163 LINC00477Q96M19 166 aa8.9□□□□□ -0.98
RBM39-202ENST00000338163 SDHAF1A6NFY7 115 aa8.9□□□□□ -0.99
RBM39-202ENST00000338163 PPP1R17O96001 155 aa8.9□□□□□ -0.99
RBM39-202ENST00000338163 RNASE3P12724 160 aaKnown RBP8.9□□□□□ -0.99
RBM39-202ENST00000338163 TTC32Q5I0X7 151 aa8.9□□□□□ -0.99
RBM39-202ENST00000338163 TEX49A0A1B0GTD5 131 aa8.89□□□□□ -0.99
RBM39-202ENST00000338163 ELANEP08246 267 aa8.89□□□□□ -0.99
RBM39-202ENST00000338163 CCDC168Q8NDH2 2452 aa8.89□□□□□ -0.99
RBM39-202ENST00000338163 TRBV7-1A0A0A6YYK4 115 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 209.2 ms