RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 MRPL16Q9NX20 251 aaKnown RBP10.61□□□□□ -0.71
CBX3-201ENST00000337620 SERF1AO75920 110 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 PPBPP02775 128 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 GATA1P15976 413 aaPredicted RBP10.6□□□□□ -0.71
CBX3-201ENST00000337620 DEFB135Q30KP9 77 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 C16orf74Q96GX8 76 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 SAMD10Q9BYL1 202 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 KIF25-AS1Q9Y6Z4 181 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 DNAH3Q8TD57 4116 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 NUPR1O60356 82 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 HIST3H2BBQ8N257 126 aa10.6□□□□□ -0.71
CBX3-201ENST00000337620 F5H697 171 aa10.59□□□□□ -0.71
CBX3-201ENST00000337620 NPYP01303 97 aa10.59□□□□□ -0.71
CBX3-201ENST00000337620 TRGV1A0A0A0MS02 117 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 LOC389332A0A1B0GUA5 103 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 PCP4L1A6NKN8 68 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 CRYGDP07320 174 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 S100A2P29034 98 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 LINC00310P59036 64 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 LINC00315P59091 139 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 IL17DQ8TAD2 202 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 NOP10Q9NPE3 64 aaKnown RBP10.58□□□□□ -0.72
CBX3-201ENST00000337620 NIT1Q86X76 327 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 PTH2Q96A98 100 aa10.58□□□□□ -0.72
CBX3-201ENST00000337620 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 EMP1P54849 157 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 RNASEKQ6P5S7 137 aaKnown RBP10.57□□□□□ -0.72
CBX3-201ENST00000337620 RASL10AQ92737 203 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 IGHV3-73A0A0B4J1V6 119 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 PLAC8L1A1L4L8 177 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 A8MWV9 139 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 ZNF56Q15929 161 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 PIK3CD-AS1Q5SR53 167 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 X6R8D5 127 aa10.57□□□□□ -0.72
CBX3-201ENST00000337620 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
CBX3-201ENST00000337620 IFITM10A6NMD0 228 aa10.56□□□□□ -0.72
CBX3-201ENST00000337620 DAZ2Q13117 558 aaKnown RBP10.56□□□□□ -0.72
CBX3-201ENST00000337620 Q6ZTI0 123 aa10.56□□□□□ -0.72
CBX3-201ENST00000337620 PRB2P02812 416 aaPredicted RBP10.55□□□□□ -0.72
CBX3-201ENST00000337620 FABP4P15090 132 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 CFAP126Q5VTH2 177 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 SUMO4Q6EEV6 95 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 POM121L12Q8N7R1 296 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 NRACQ8N912 160 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 OR11H2Q8NH07 326 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 LAMTOR2Q9Y2Q5 125 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 SMIM9A6NGZ8 99 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 A8MZ25 164 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 LINC00614P0C842 121 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
CBX3-201ENST00000337620 AKR1D1P51857 326 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 URB1-AS1Q96HZ7 61 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 MAP1LC3AQ9H492 121 aa10.55□□□□□ -0.72
CBX3-201ENST00000337620 ESDP10768 282 aa10.54□□□□□ -0.72
CBX3-201ENST00000337620 RIPPLY3P57055 190 aa10.54□□□□□ -0.72
CBX3-201ENST00000337620 LGALS9BQ3B8N2 356 aa10.54□□□□□ -0.72
CBX3-201ENST00000337620 Q6ZWC4 215 aa10.54□□□□□ -0.72
CBX3-201ENST00000337620 RPL39LQ96EH5 51 aaKnown RBP10.54□□□□□ -0.72
CBX3-201ENST00000337620 FA2HQ7L5A8 372 aa10.54□□□□□ -0.72
CBX3-201ENST00000337620 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
CBX3-201ENST00000337620 OVOL2Q9BRP0 275 aa10.54□□□□□ -0.72
CBX3-201ENST00000337620 NBEAL1Q6ZS30 2694 aa10.54□□□□□ -0.72
CBX3-201ENST00000337620 RS1O15537 224 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 HSBP1O75506 76 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 PMCHP20382 165 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 FAM19A2Q8N3H0 131 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 TMEM18Q96B42 140 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 RNF183Q96D59 192 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 NDUFAF3Q9BU61 184 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
CBX3-201ENST00000337620 GAGE12BA1L429 117 aa10.52□□□□□ -0.72
CBX3-201ENST00000337620 GAGE7O76087 117 aa10.52□□□□□ -0.72
CBX3-201ENST00000337620 GAGE12FP0CL80 117 aa10.52□□□□□ -0.72
CBX3-201ENST00000337620 GAGE12GP0CL81 117 aa10.52□□□□□ -0.72
CBX3-201ENST00000337620 GAGE12IP0CL82 117 aa10.52□□□□□ -0.72
CBX3-201ENST00000337620 CHCHD1Q96BP2 118 aaKnown RBP10.52□□□□□ -0.72
CBX3-201ENST00000337620 UFSP1Q6NVU6 142 aa10.52□□□□□ -0.73
CBX3-201ENST00000337620 TRGV2A0A075B6R0 118 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 DEFB4AO15263 64 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 PPP1R17O96001 155 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 IGHV3-53P01767 116 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 AMTP48728 403 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 PMCHL1Q16048 86 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 C12orf57Q99622 126 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 AP5S1Q9NUS5 200 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 M0QY20 66 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 RHODO00212 210 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 OR10D4PQ8NGN7 298 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 ZNF479Q96JC4 524 aa10.51□□□□□ -0.73
CBX3-201ENST00000337620 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
CBX3-201ENST00000337620 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
CBX3-201ENST00000337620 SUMO2P61956 95 aaKnown RBP10.5□□□□□ -0.73
CBX3-201ENST00000337620 PACRGQ96M98 296 aaPredicted RBP10.5□□□□□ -0.73
CBX3-201ENST00000337620 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
CBX3-201ENST00000337620 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
CBX3-201ENST00000337620 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
CBX3-201ENST00000337620 MIFP14174 115 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms