RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 KNCNA6PVL3 124 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 CRLF1O75462 422 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 ZNF503Q96F45 646 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 INAFM1C9JVW0 142 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 TSPAN13O95857 204 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 SSBP2P81877 361 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-201ENST00000335508 H3BMM0 161 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 CD300EQ496F6 205 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-201ENST00000335508 C19orf71A6NCJ1 209 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 SPATA45Q537H7 98 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 SFTA2Q6UW10 78 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 NIPBLQ6KC79 2804 aaeCLIP5.23□□□□□ -1.57
SF3B1-201ENST00000335508 ADARB2-AS1A8MUL3 147 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 TCTAP57738 103 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 ZNF702PQ9H963 129 aa5.23□□□□□ -1.57
SF3B1-201ENST00000335508 C3orf79P0CE67 100 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 HLA-DMBP28068 263 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 EREGO14944 169 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 LY6G6DO95868 133 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 TMEM141Q96I45 108 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 HIST1H4GQ99525 98 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 FAM110AQ9BQ89 295 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 TRBV25-1A0A075B6N4 114 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 A0A087WWL8 130 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 SYS1-DBNDD2H3BUS1 97 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 AZU1P20160 251 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 C14orf144Q96I85 54 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 DNAJC30Q96LL9 226 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 UTP20O75691 2785 aaKnown RBP5.22□□□□□ -1.57
SF3B1-201ENST00000335508 GAGE10A6NGK3 116 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 F5H768 121 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 I3L3M4 83 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 PIK3CD-AS1Q5SR53 167 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 UBE2DNLQ8IWF7 75 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 RASL10AQ92737 203 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 ZMAT4Q9H898 229 aa5.22□□□□□ -1.57
SF3B1-201ENST00000335508 APOMO95445 188 aa5.21□□□□□ -1.57
SF3B1-201ENST00000335508 TDRG1Q3Y452 100 aa5.21□□□□□ -1.57
SF3B1-201ENST00000335508 GFI1BQ5VTD9 330 aa5.21□□□□□ -1.57
SF3B1-201ENST00000335508 C16orf74Q96GX8 76 aa5.21□□□□□ -1.57
SF3B1-201ENST00000335508 MRPL51Q4U2R6 128 aaKnown RBP5.21□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE12BA1L429 117 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE7O76087 117 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE12FP0CL80 117 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE12GP0CL81 117 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE12IP0CL82 117 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 TMEM243Q9BU79 118 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 F8VRH5 84 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 HIST2H2BCQ6DN03 193 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 HIST2H2BDQ6DRA6 164 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 TOMM7Q9P0U1 55 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 TRAV12-2A0A075B6T6 113 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 SIGLEC8Q9NYZ4 499 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 KLK9Q9UKQ9 250 aa5.21□□□□□ -1.58
SF3B1-201ENST00000335508 PRAC2D3DTV9 90 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 PSMB2P49721 201 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 PAX4O43316 350 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 TRBV12-3P01733 135 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 IGKCP01834 107 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 KIR2DL5BA0A0G2JN68 375 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 KIR2DL5BA0A0G2JPC4 375 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 KIR2DL5AQ8N109 375 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 ZNRF2Q8NHG8 242 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 KIR2DL5BQ8NHK3 375 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 SPANXA1Q9NS26 97 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 ADAMTS20P59510 1910 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 ZFAND2AQ8N6M9 145 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 FABP2P12104 132 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 LGALS9BQ3B8N2 356 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 IL17DQ8TAD2 202 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 TMEM263Q8WUH6 116 aaKnown RBP5.2□□□□□ -1.58
SF3B1-201ENST00000335508 RMI2Q96E14 147 aa5.2□□□□□ -1.58
SF3B1-201ENST00000335508 NPYP01303 97 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 PMVKQ15126 192 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 PYY3Q5JQD4 70 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 C8orf49Q96NF6 230 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 PRO0255Q9UI72 69 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 EXPH5Q8NEV8 1989 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 LGALS9CQ6DKI2 356 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 MAP6D1Q9H9H5 199 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 IGHV3-53P01767 116 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 IGLC6P0CF74 106 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 NEGR1Q7Z3B1 354 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE12JA6NER3 117 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE1Q13065 139 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE4Q13068 117 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE5Q13069 117 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 GAGE13Q4V321 117 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 SMIM13P0DJ93 91 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 SS18Q15532 418 aa5.19□□□□□ -1.58
SF3B1-201ENST00000335508 FXYD7P58549 80 aa5.18□□□□□ -1.58
SF3B1-201ENST00000335508 C6orf226Q5I0X4 101 aa5.18□□□□□ -1.58
SF3B1-201ENST00000335508 MRPL55Q7Z7F7 128 aaKnown RBP5.18□□□□□ -1.58
SF3B1-201ENST00000335508 EDA2RQ9HAV5 297 aa5.18□□□□□ -1.58
SF3B1-201ENST00000335508 MYMXA0A1B0GTQ4 84 aa5.18□□□□□ -1.58
SF3B1-201ENST00000335508 SCGB1A1P11684 91 aa5.18□□□□□ -1.58
SF3B1-201ENST00000335508 MRGPRG-AS1Q2M3A8 158 aa5.18□□□□□ -1.58
SF3B1-201ENST00000335508 CDPF1Q6NVV7 123 aa5.18□□□□□ -1.58
SF3B1-201ENST00000335508 Q8N1Y9 231 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms