RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 H7C2G1 150 aa10.46□□□□□ -0.74
SYNE3-201ENST00000334258 TMEM170BQ5T4T1 132 aa10.46□□□□□ -0.74
SYNE3-201ENST00000334258 DPH3P1Q9H4G8 78 aa10.46□□□□□ -0.74
SYNE3-201ENST00000334258 ZFAND3Q9H8U3 227 aa10.46□□□□□ -0.74
SYNE3-201ENST00000334258 TCL1BO95988 128 aa10.45□□□□□ -0.74
SYNE3-201ENST00000334258 UBE2D1P51668 147 aa10.45□□□□□ -0.74
SYNE3-201ENST00000334258 G3V318 75 aa10.45□□□□□ -0.74
SYNE3-201ENST00000334258 RPL11P62913 178 aaKnown RBP10.45□□□□□ -0.74
SYNE3-201ENST00000334258 LY6G5BQ8NDX9 201 aa10.45□□□□□ -0.74
SYNE3-201ENST00000334258 AJUBAQ96IF1 538 aa10.45□□□□□ -0.74
SYNE3-201ENST00000334258 CSDC2Q9Y534 153 aaKnown RBP10.45□□□□□ -0.74
SYNE3-201ENST00000334258 DUSP14O95147 198 aaKnown RBP10.45□□□□□ -0.74
SYNE3-201ENST00000334258 NDUFV3P56181 108 aaKnown RBP10.45□□□□□ -0.74
SYNE3-201ENST00000334258 PRR9Q5T870 116 aa10.45□□□□□ -0.74
SYNE3-201ENST00000334258 NDUFA11Q86Y39 141 aa10.45□□□□□ -0.74
SYNE3-201ENST00000334258 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
SYNE3-201ENST00000334258 IGKV3-7A0A075B6H7 116 aa10.44□□□□□ -0.74
SYNE3-201ENST00000334258 ASIPP42127 132 aa10.44□□□□□ -0.74
SYNE3-201ENST00000334258 SETD2Q9BYW2 2564 aaPredicted RBP10.44□□□□□ -0.74
SYNE3-201ENST00000334258 IGHV4-4A0A075B6R2 117 aa10.44□□□□□ -0.74
SYNE3-201ENST00000334258 C11orf86A6NJI1 115 aa10.44□□□□□ -0.74
SYNE3-201ENST00000334258 C19orf84I3L1E1 186 aa10.44□□□□□ -0.74
SYNE3-201ENST00000334258 ATP6V0E1O15342 81 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 DEFB1P60022 68 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 MEIG1Q5JSS6 88 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 C9orf47Q6ZRZ4 202 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 VCX2Q9H322 139 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 CLPSL1A2RUU4 121 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 MRPL23Q16540 153 aaKnown RBP10.43□□□□□ -0.74
SYNE3-201ENST00000334258 C5orf47Q569G3 176 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 TTC32Q5I0X7 151 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 NBPF19A0A087WUL8 3843 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 CD7P09564 240 aa10.43□□□□□ -0.74
SYNE3-201ENST00000334258 SONP18583 2426 aaKnown RBP10.42□□□□□ -0.74
SYNE3-201ENST00000334258 ODF3BA8MYP8 253 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 F5H697 171 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 M0R1W7 72 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
SYNE3-201ENST00000334258 UBE2D3P61077 147 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 UBE2D2P62837 147 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 ANKRD29Q8N6D5 301 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 Q8N9W7 124 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 TP53TG1Q9Y2A0 90 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 TRAV21A0A0B4J279 112 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 GAGE2BQ13066 116 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 GAGE2EQ4V326 116 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 OR10J6PQ8NGY7 276 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 FAM110DQ8TAY7 271 aaPredicted RBP10.42□□□□□ -0.74
SYNE3-201ENST00000334258 EEF1AKMT3Q96AZ1 226 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 GAGE2DQ9UEU5 116 aa10.42□□□□□ -0.74
SYNE3-201ENST00000334258 A0A0J9YY99 117 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 Q6ZS46 218 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 CCDC140Q96MF4 163 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 UBTD1Q9HAC8 227 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 C9JAW5 83 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 LOC107984640A0A0U1RRK4 108 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 GNRH2O43555 120 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 CFC1BP0CG36 223 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 CFC1P0CG37 223 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 COX6B1P14854 86 aa10.41□□□□□ -0.74
SYNE3-201ENST00000334258 Q1RN00 199 aa10.4□□□□□ -0.74
SYNE3-201ENST00000334258 C10orf126Q8N4M7 172 aa10.4□□□□□ -0.74
SYNE3-201ENST00000334258 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
SYNE3-201ENST00000334258 TRAV4A0A0B4J268 109 aa10.4□□□□□ -0.74
SYNE3-201ENST00000334258 LINC00527Q9UJ94 153 aa10.4□□□□□ -0.74
SYNE3-201ENST00000334258 TMEM262E9PQX1 116 aa10.39□□□□□ -0.75
SYNE3-201ENST00000334258 LGALS3P17931 250 aaKnown RBP10.39□□□□□ -0.75
SYNE3-201ENST00000334258 RPL39P62891 51 aaKnown RBP10.39□□□□□ -0.75
SYNE3-201ENST00000334258 Q8N6K4 173 aa10.39□□□□□ -0.75
SYNE3-201ENST00000334258 MRPL53Q96EL3 112 aaKnown RBP10.39□□□□□ -0.75
SYNE3-201ENST00000334258 DOPEY2Q9Y3R5 2298 aa10.39□□□□□ -0.75
SYNE3-201ENST00000334258 FBN2P35556 2912 aa10.39□□□□□ -0.75
SYNE3-201ENST00000334258 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
SYNE3-201ENST00000334258 SLC25A20O43772 301 aa10.39□□□□□ -0.75
SYNE3-201ENST00000334258 PMVKQ15126 192 aa10.39□□□□□ -0.75
SYNE3-201ENST00000334258 C20orf173Q96LM9 149 aa10.39□□□□□ -0.75
SYNE3-201ENST00000334258 ANKRD17O75179 2603 aaKnown RBP10.39□□□□□ -0.75
SYNE3-201ENST00000334258 CRLF1O75462 422 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 PPP1R17O96001 155 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 CRYGDP07320 174 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 TRAV25A0A0B4J276 109 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 IFITM1P13164 125 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 LINC00477Q96M19 166 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 BEX4Q9NWD9 120 aaPredicted RBP10.38□□□□□ -0.75
SYNE3-201ENST00000334258 F6UB75 175 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 RHODO00212 210 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 NRGNQ92686 78 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 PRORYQ9H606 182 aa10.38□□□□□ -0.75
SYNE3-201ENST00000334258 TRAV2A0A0B4J234 112 aa10.37□□□□□ -0.75
SYNE3-201ENST00000334258 TRPT1Q86TN4 253 aaKnown RBP10.37□□□□□ -0.75
SYNE3-201ENST00000334258 A0A087WWL8 130 aa10.37□□□□□ -0.75
SYNE3-201ENST00000334258 OOSP1A8MZH6 123 aa10.37□□□□□ -0.75
SYNE3-201ENST00000334258 IGHV3-30P01768 117 aa10.37□□□□□ -0.75
SYNE3-201ENST00000334258 IGHV3-30-5P0DP03 117 aa10.37□□□□□ -0.75
SYNE3-201ENST00000334258 TSPEAR-AS2P59090 65 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms