RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PVRIGQ6DKI7 326 aa11.96□□□□□ -0.5
LEMD3-201ENST00000308330 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.5
LEMD3-201ENST00000308330 NFE4Q86UQ8 179 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 NDPQ00604 133 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 DEFB121Q5J5C9 76 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 AJUBAQ96IF1 538 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 POLQO75417 2590 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 IGKV1-16P04430 117 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 EDN2P20800 178 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 STHQ8IWL8 128 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 LYPD1Q8N2G4 141 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 CLEC2BQ92478 149 aa11.95□□□□□ -0.5
LEMD3-201ENST00000308330 TMEM75Q8N9X5 138 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 FANCD2OSQ96PS1 177 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 LINC01587Q99440 93 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 MDFICQ9P1T7 246 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 ATP5EP56381 51 aaPredicted RBP11.94□□□□□ -0.5
LEMD3-201ENST00000308330 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 GDF5OSQ5U4N7 250 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 PHLDA1Q8WV24 401 aaPredicted RBP11.94□□□□□ -0.5
LEMD3-201ENST00000308330 NDUFA12Q9UI09 145 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 SEM1Q6ZVN7 128 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 SMIM2Q9BVW6 85 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 KIAA1549Q9HCM3 1950 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
LEMD3-201ENST00000308330 USP17L23D6RBM5 183 aa11.93□□□□□ -0.5
LEMD3-201ENST00000308330 VPREB1P12018 145 aa11.93□□□□□ -0.5
LEMD3-201ENST00000308330 LY6G5BQ8NDX9 201 aa11.93□□□□□ -0.5
LEMD3-201ENST00000308330 DYNAPQ8N1N2 210 aa11.93□□□□□ -0.5
LEMD3-201ENST00000308330 A0A1B0GXF2 115 aa11.93□□□□□ -0.5
LEMD3-201ENST00000308330 PAX4O43316 350 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 PRR20EP86478 221 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 PRR20CP86479 221 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 PRR20DP86480 221 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 PRR20BP86481 221 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 PRR20AP86496 221 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 MLANAQ16655 118 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 LINC00158P58513 81 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 Q8TAT8 98 aa11.92□□□□□ -0.5
LEMD3-201ENST00000308330 C14orf178Q8N769 122 aaPredicted RBP11.91□□□□□ -0.5
LEMD3-201ENST00000308330 PYGO1Q9Y3Y4 419 aa11.91□□□□□ -0.5
LEMD3-201ENST00000308330 MRPS36P82909 103 aaKnown RBP11.91□□□□□ -0.5
LEMD3-201ENST00000308330 LYPD6Q86Y78 171 aa11.91□□□□□ -0.5
LEMD3-201ENST00000308330 IGHV4-61A0A0C4DH41 118 aa11.9□□□□□ -0.5
LEMD3-201ENST00000308330 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.5
LEMD3-201ENST00000308330 TRGV2A0A075B6R0 118 aa11.9□□□□□ -0.5
LEMD3-201ENST00000308330 PRIMA1Q86XR5 153 aa11.9□□□□□ -0.51
LEMD3-201ENST00000308330 IGHV4-30-2A0A087WSY4 118 aa11.89□□□□□ -0.51
LEMD3-201ENST00000308330 RASL10AQ92737 203 aa11.89□□□□□ -0.51
LEMD3-201ENST00000308330 PRRC2AP48634 2157 aaKnown RBP11.89□□□□□ -0.51
LEMD3-201ENST00000308330 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
LEMD3-201ENST00000308330 USMG5Q96IX5 58 aa11.89□□□□□ -0.51
LEMD3-201ENST00000308330 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
LEMD3-201ENST00000308330 C2CD3Q4AC94 2353 aa11.89□□□□□ -0.51
LEMD3-201ENST00000308330 TRAV26-2A0A0B4J265 109 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 P0DMU3 169 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 FAM231AP0DMU4 169 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 FAM231CP0DMU5 169 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 RNASE4P34096 147 aaKnown RBP11.88□□□□□ -0.51
LEMD3-201ENST00000308330 DPH3Q96FX2 82 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 FOXE3Q13461 319 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
LEMD3-201ENST00000308330 FN1P02751 2386 aaKnown RBP11.88□□□□□ -0.51
LEMD3-201ENST00000308330 KAAG1Q9UBP8 84 aa11.87□□□□□ -0.51
LEMD3-201ENST00000308330 NDUFC1O43677 76 aa11.87□□□□□ -0.51
LEMD3-201ENST00000308330 C6orf226Q5I0X4 101 aa11.87□□□□□ -0.51
LEMD3-201ENST00000308330 INS-IGF2F8WCM5 200 aa11.87□□□□□ -0.51
LEMD3-201ENST00000308330 G3V318 75 aa11.86□□□□□ -0.51
LEMD3-201ENST00000308330 ADARB2-AS1A8MUL3 147 aa11.86□□□□□ -0.51
LEMD3-201ENST00000308330 OVOL3O00110 214 aa11.86□□□□□ -0.51
LEMD3-201ENST00000308330 ATP6V0E1O15342 81 aa11.86□□□□□ -0.51
LEMD3-201ENST00000308330 DAZAP2Q15038 168 aaPredicted RBP11.86□□□□□ -0.51
LEMD3-201ENST00000308330 C17orf58Q2M2W7 97 aa11.85□□□□□ -0.51
LEMD3-201ENST00000308330 TRBV7-1A0A0A6YYK4 115 aa11.85□□□□□ -0.51
LEMD3-201ENST00000308330 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
LEMD3-201ENST00000308330 TRAV13-2A0A0B4J235 113 aa11.85□□□□□ -0.51
LEMD3-201ENST00000308330 ODF3L1Q8IXM7 274 aa11.85□□□□□ -0.51
LEMD3-201ENST00000308330 CTSZQ9UBR2 303 aa11.85□□□□□ -0.51
LEMD3-201ENST00000308330 COL4A4P53420 1690 aaPredicted RBP11.85□□□□□ -0.51
LEMD3-201ENST00000308330 WFDC9Q8NEX5 89 aa11.84□□□□□ -0.51
LEMD3-201ENST00000308330 MTORP42345 2549 aa11.84□□□□□ -0.51
LEMD3-201ENST00000308330 ZNF876PQ49A33 203 aa11.84□□□□□ -0.51
LEMD3-201ENST00000308330 PLXNB3Q9ULL4 1909 aa11.84□□□□□ -0.51
LEMD3-201ENST00000308330 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.84□□□□□ -0.51
LEMD3-201ENST00000308330 PRB2P02812 416 aaPredicted RBP11.84□□□□□ -0.51
LEMD3-201ENST00000308330 FUSP35637 526 aaKnown RBP eCLIP11.84□□□□□ -0.51
LEMD3-201ENST00000308330 FBXL19-AS1Q494R0 122 aa11.84□□□□□ -0.51
LEMD3-201ENST00000308330 DSCAML1Q8TD84 2053 aa11.83□□□□□ -0.51
LEMD3-201ENST00000308330 IGHV1OR15-1A0A075B7D0 117 aa11.83□□□□□ -0.51
LEMD3-201ENST00000308330 GATA1P15976 413 aaPredicted RBP11.83□□□□□ -0.52
LEMD3-201ENST00000308330 DSCAMO60469 2012 aa11.82□□□□□ -0.52
LEMD3-201ENST00000308330 OBSL1O75147 1896 aa11.82□□□□□ -0.52
LEMD3-201ENST00000308330 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
LEMD3-201ENST00000308330 RHPN1-AS1Q9BWJ2 59 aa11.82□□□□□ -0.52
LEMD3-201ENST00000308330 FAM110DQ8TAY7 271 aaPredicted RBP11.82□□□□□ -0.52
LEMD3-201ENST00000308330 C1orf159Q96HA4 380 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms