RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 POM121L12Q8N7R1 296 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 SPXQ9BT56 116 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 KIF25-AS1Q9Y6Z4 181 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 M0R2P5 195 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 WIPF1O43516 503 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 GAS8-AS1O95177 125 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 PPP1R17O96001 155 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 PIK3CD-AS1Q5SR53 167 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 PTH2Q96A98 100 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 NXT2Q9NPJ8 142 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 IGHV1-24A0A0C4DH33 117 aa11.43□□□□□ -0.58
HERPUD1-201ENST00000300302 GIG44P09565 113 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-201ENST00000300302 GATA1P15976 413 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-201ENST00000300302 NRACQ8N912 160 aa11.43□□□□□ -0.58
HERPUD1-201ENST00000300302 C11orf72Q8NBR9 251 aa11.43□□□□□ -0.58
HERPUD1-201ENST00000300302 JPT2Q9H910 190 aa11.43□□□□□ -0.58
HERPUD1-201ENST00000300302 A0A087WWL8 130 aa11.42□□□□□ -0.58
HERPUD1-201ENST00000300302 PRM2P04554 102 aa11.42□□□□□ -0.58
HERPUD1-201ENST00000300302 PRSS47A8MTI9 375 aa11.42□□□□□ -0.58
HERPUD1-201ENST00000300302 LINC00315P59091 139 aa11.42□□□□□ -0.58
HERPUD1-201ENST00000300302 PMCHL1Q16048 86 aa11.42□□□□□ -0.58
HERPUD1-201ENST00000300302 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
HERPUD1-201ENST00000300302 VWFP04275 2813 aa11.41□□□□□ -0.58
HERPUD1-201ENST00000300302 F5H697 171 aa11.41□□□□□ -0.58
HERPUD1-201ENST00000300302 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
HERPUD1-201ENST00000300302 A8MWV9 139 aa11.4□□□□□ -0.58
HERPUD1-201ENST00000300302 CRYGDP07320 174 aa11.4□□□□□ -0.58
HERPUD1-201ENST00000300302 Q8N8P6 123 aa11.4□□□□□ -0.58
HERPUD1-201ENST00000300302 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-201ENST00000300302 C20orf78Q9BR46 151 aa11.4□□□□□ -0.58
HERPUD1-201ENST00000300302 NDUFAF3Q9BU61 184 aa11.4□□□□□ -0.58
HERPUD1-201ENST00000300302 LEPROTL1O95214 131 aa11.4□□□□□ -0.59
HERPUD1-201ENST00000300302 SCGB1D1O95968 90 aa11.4□□□□□ -0.59
HERPUD1-201ENST00000300302 AZU1P20160 251 aa11.4□□□□□ -0.59
HERPUD1-201ENST00000300302 KRTDAPP60985 99 aa11.4□□□□□ -0.59
HERPUD1-201ENST00000300302 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.59
HERPUD1-201ENST00000300302 RASL10AQ92737 203 aa11.4□□□□□ -0.59
HERPUD1-201ENST00000300302 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
HERPUD1-201ENST00000300302 ZNF56Q15929 161 aa11.39□□□□□ -0.59
HERPUD1-201ENST00000300302 SUMO4Q6EEV6 95 aa11.39□□□□□ -0.59
HERPUD1-201ENST00000300302 LURAP1LQ8IV03 231 aa11.39□□□□□ -0.59
HERPUD1-201ENST00000300302 RNASE8Q8TDE3 154 aaKnown RBP11.39□□□□□ -0.59
HERPUD1-201ENST00000300302 SUMO2P61956 95 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-201ENST00000300302 C16orf74Q96GX8 76 aa11.38□□□□□ -0.59
HERPUD1-201ENST00000300302 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
HERPUD1-201ENST00000300302 ZNF705AQ6ZN79 300 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-201ENST00000300302 RPL39LQ96EH5 51 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-201ENST00000300302 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
HERPUD1-201ENST00000300302 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 HBDP02042 147 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 C3orf79P0CE67 100 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 RRN3P1Q2M238 152 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 IL17DQ8TAD2 202 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 MDFIQ99750 246 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 ST20Q9HBF5 79 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 RHODO00212 210 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 BTF3P20290 206 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 Q8N976 141 aa11.36□□□□□ -0.59
HERPUD1-201ENST00000300302 KIR2DL5BA0A0G2JN68 375 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 KIR2DL5BA0A0G2JPC4 375 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 LINC00587B1AMM8 73 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 H7C1H1 209 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 K7EMI3 77 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 APOC4P55056 127 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 KIR2DL5AQ8N109 375 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 KIR2DL5BQ8NHK3 375 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 TMEM70Q9BUB7 260 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 TRRAPQ9Y4A5 3859 aa11.35□□□□□ -0.59
HERPUD1-201ENST00000300302 M0QY20 66 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 LAGE3Q14657 143 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 LGALS9BQ3B8N2 356 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 CFAP126Q5VTH2 177 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 MAP1LC3CQ9BXW4 147 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 ZMAT5Q9UDW3 170 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 NOTCH3Q9UM47 2321 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 A0A096LNJ9 63 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 TRGV1A0A0A0MS02 117 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 FCER1GP30273 86 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 DAZ2Q13117 558 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 EDA2RQ9HAV5 297 aa11.34□□□□□ -0.59
HERPUD1-201ENST00000300302 TRBV6-5A0A0K0K1A5 114 aa11.33□□□□□ -0.6
HERPUD1-201ENST00000300302 RS1O15537 224 aa11.33□□□□□ -0.6
HERPUD1-201ENST00000300302 PKIAP61925 76 aa11.33□□□□□ -0.6
HERPUD1-201ENST00000300302 UFSP1Q6NVU6 142 aa11.33□□□□□ -0.6
HERPUD1-201ENST00000300302 TEX43Q6ZNM6 134 aa11.33□□□□□ -0.6
HERPUD1-201ENST00000300302 ZNF664Q8N3J9 261 aa11.33□□□□□ -0.6
HERPUD1-201ENST00000300302 ORMDL2Q53FV1 153 aa11.32□□□□□ -0.6
HERPUD1-201ENST00000300302 OXLD1Q5BKU9 147 aa11.32□□□□□ -0.6
HERPUD1-201ENST00000300302 IGHV3-73A0A0B4J1V6 119 aa11.32□□□□□ -0.6
HERPUD1-201ENST00000300302 TCAPO15273 167 aa11.32□□□□□ -0.6
HERPUD1-201ENST00000300302 ZFP2Q6ZN57 461 aa11.32□□□□□ -0.6
HERPUD1-201ENST00000300302 LINC00173Q6ZV60 143 aa11.32□□□□□ -0.6
HERPUD1-201ENST00000300302 PRO1933Q9H354 126 aa11.32□□□□□ -0.6
HERPUD1-201ENST00000300302 NOP10Q9NPE3 64 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-201ENST00000300302 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
HERPUD1-201ENST00000300302 SYS1-DBNDD2H3BUS1 97 aa11.31□□□□□ -0.6
HERPUD1-201ENST00000300302 VCYO14598 125 aa11.31□□□□□ -0.6
HERPUD1-201ENST00000300302 C20orf202A1L168 122 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms