RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 ABCA12Q86UK0 2595 aa8.88□□□□□ -0.99
HDGFL3-201ENST00000299633 MUC6Q6W4X9 2439 aa8.88□□□□□ -0.99
HDGFL3-201ENST00000299633 RHPN1-AS1Q9BWJ2 59 aa8.88□□□□□ -0.99
HDGFL3-201ENST00000299633 IGKV1-27A0A075B6S5 117 aa8.88□□□□□ -0.99
HDGFL3-201ENST00000299633 FAM27E3Q08E93 113 aa8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 WBP1Q96G27 269 aa8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 SMIM26A0A096LP01 95 aa8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 DAZ2Q13117 558 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 DAZ4Q86SG3 579 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 DAZ3Q9NR90 486 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 SNURFQ9Y675 71 aa8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 MRPS36P82909 103 aaKnown RBP8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 H0YJW9 148 aa8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 FXYD2P54710 66 aa8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 FLVCR1-AS1Q8TAF5 88 aa8.87□□□□□ -0.99
HDGFL3-201ENST00000299633 LINC01619G3V211 115 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 YPEL3P61236 119 aaPredicted RBP8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 Q6P435 159 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 ZNF491Q8N8L2 437 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 COX7A2LO14548 114 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 HRCT1Q6UXD1 115 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 DEFB131AP59861 70 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 CAMK2N2Q96S95 79 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 TRBV27A0A0K0K1C4 114 aa8.86□□□□□ -0.99
HDGFL3-201ENST00000299633 C5orf63A6NC05 138 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 COLQQ9Y215 455 aaPredicted RBP8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 C10orf55Q5SWW7 151 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 CLUHP3Q96NS8 147 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 DEFB112Q30KQ8 113 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 TMEM200BQ69YZ2 307 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 ZNF747Q9BV97 191 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 TEX49A0A1B0GTD5 131 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 LINC00205P59089 165 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 TMEM14BQ9NUH8 114 aa8.85□□□□□ -0.99
HDGFL3-201ENST00000299633 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 IGKV2-29A2NJV5 120 aaPredicted RBP8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 B9D2Q9BPU9 175 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 C9orf106Q8NAJ2 232 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 MRPL53Q96EL3 112 aaKnown RBP8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 IGKV1-12A0A0C4DH73 117 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 IGKV1D-12P01611 117 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 GATA1P15976 413 aaPredicted RBP8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 DAND5Q8N907 189 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 XCL2Q9UBD3 114 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 BUB1B-PAK6H3BSN5 160 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 RNASE6Q93091 150 aaKnown RBP8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 TM2D2Q9BX73 214 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 NUPR1O60356 82 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 SPACA3Q8IXA5 215 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 TCL1BO95988 128 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 PLA2G2AP14555 144 aa8.84□□□□□ -0.99
HDGFL3-201ENST00000299633 OOSP1A8MZH6 123 aa8.84□□□□□ -1
HDGFL3-201ENST00000299633 FAM222AQ5U5X8 452 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 SPRR3Q9UBC9 169 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 YPEL4Q96NS1 127 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 QRFPP83859 136 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 Q6ZQT7 251 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 A0A0J9YWU9 116 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 DSCR9P59020 149 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 COA6Q5JTJ3 125 aaKnown RBP8.83□□□□□ -1
HDGFL3-201ENST00000299633 COX7BP24311 80 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 A0A096LPF7 62 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 TEX36Q5VZQ5 186 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 CCDC179H3BU77 68 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 ZNF726P1Q15940 193 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 Q6ZRM9 215 aa8.83□□□□□ -1
HDGFL3-201ENST00000299633 NOP10Q9NPE3 64 aaKnown RBP8.83□□□□□ -1
HDGFL3-201ENST00000299633 RBAKDNA6NC62 111 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 A0A0G2JRQ6 117 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 C16orf54Q6UWD8 224 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 SMIM9A6NGZ8 99 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 TMEM14CQ9P0S9 112 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 IGLV3-32A0A0A0MS00 114 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 Q9HAA7 133 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 MRPS18CQ9Y3D5 142 aaKnown RBP8.82□□□□□ -1
HDGFL3-201ENST00000299633 PINLYPA6NC86 204 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 TMEM178BH3BS89 294 aa8.82□□□□□ -1
HDGFL3-201ENST00000299633 FAM19A3Q7Z5A8 133 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 Q8N1Y9 231 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 SPAG11BQ08648 103 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 VWCEQ96DN2 955 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 H3BUX3 64 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 Q8N9L7 120 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 LINC00473A8K010 186 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 LINC00173Q6ZV60 143 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 C5orf38Q86SI9 138 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 IGLV3-9A0A075B6K5 115 aa8.81□□□□□ -1
HDGFL3-201ENST00000299633 IGHV7-4-1A0A0J9YVY3 117 aa8.8□□□□□ -1
HDGFL3-201ENST00000299633 EFNA2O43921 213 aa8.8□□□□□ -1
HDGFL3-201ENST00000299633 WDR86Q86TI4 376 aa8.8□□□□□ -1
HDGFL3-201ENST00000299633 IGLV3-19P01714 112 aa8.8□□□□□ -1
HDGFL3-201ENST00000299633 PRR25Q96S07 402 aa8.8□□□□□ -1
HDGFL3-201ENST00000299633 NDUFA1O15239 70 aa8.8□□□□□ -1
HDGFL3-201ENST00000299633 C9orf85Q96MD7 179 aa8.8□□□□□ -1
HDGFL3-201ENST00000299633 GATA4P43694 442 aa8.79□□□□□ -1
HDGFL3-201ENST00000299633 GGNQ86UU5 652 aa8.79□□□□□ -1
HDGFL3-201ENST00000299633 CSDC2Q9Y534 153 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms