RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 LINC01619G3V211 115 aa8.66□□□□□ -1.02
TRUB1-201ENST00000298746 CCL21O00585 134 aa8.66□□□□□ -1.02
TRUB1-201ENST00000298746 C20orf173Q96LM9 149 aa8.66□□□□□ -1.02
TRUB1-201ENST00000298746 CLPSL1A2RUU4 121 aa8.65□□□□□ -1.02
TRUB1-201ENST00000298746 SAA4P35542 130 aa8.65□□□□□ -1.02
TRUB1-201ENST00000298746 LY6EQ16553 131 aa8.65□□□□□ -1.02
TRUB1-201ENST00000298746 C2orf82Q6UX34 121 aa8.65□□□□□ -1.02
TRUB1-201ENST00000298746 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 GAGE12JA6NER3 117 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 OVOL1O14753 267 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 GAGE7O76087 117 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 COX6CP09669 75 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 GAGE12FP0CL80 117 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 GAGE12GP0CL81 117 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 GAGE12IP0CL82 117 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 GAGE4Q13068 117 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 ATXN8Q156A1 80 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 MUSTN1Q8IVN3 82 aa8.65□□□□□ -1.03
TRUB1-201ENST00000298746 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 IFITM1P13164 125 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 TSPEAR-AS2P59090 65 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 C15orf53Q8NAA6 179 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 LY6G5BQ8NDX9 201 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 PSMG3-AS1Q96PY0 264 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 IGHV3-30P01768 117 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 IGHV3-30-5P0DP03 117 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 SLC25A29Q8N8R3 303 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 MINOS1Q5TGZ0 78 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 PIP4P1Q86T03 277 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 C3orf56Q8N813 242 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 MINOS1-NBL1R4GNA1 71 aa8.64□□□□□ -1.03
TRUB1-201ENST00000298746 SUMO4Q6EEV6 95 aa8.63□□□□□ -1.03
TRUB1-201ENST00000298746 UNQ9165/PRO28630Q6UXU0 137 aa8.63□□□□□ -1.03
TRUB1-201ENST00000298746 Q8N1Y9 231 aa8.63□□□□□ -1.03
TRUB1-201ENST00000298746 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
TRUB1-201ENST00000298746 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
TRUB1-201ENST00000298746 ODF3BA8MYP8 253 aa8.63□□□□□ -1.03
TRUB1-201ENST00000298746 ASH1LQ9NR48 2969 aaKnown RBP8.63□□□□□ -1.03
TRUB1-201ENST00000298746 IGHV4-4A0A075B6R2 117 aa8.63□□□□□ -1.03
TRUB1-201ENST00000298746 OOSP1A8MZH6 123 aa8.63□□□□□ -1.03
TRUB1-201ENST00000298746 MRPL53Q96EL3 112 aaKnown RBP8.63□□□□□ -1.03
TRUB1-201ENST00000298746 PRRC2AP48634 2157 aaKnown RBP8.62□□□□□ -1.03
TRUB1-201ENST00000298746 TRBV12-3P01733 135 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 CRYGDP07320 174 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 COX6B1P14854 86 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 ZFP36P26651 326 aaKnown RBP8.62□□□□□ -1.03
TRUB1-201ENST00000298746 TMEM141Q96I45 108 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 AKAP13Q12802 2813 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 IGHV3-73A0A0B4J1V6 119 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 A0A0J9YXV3 536 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 NDUFV3P56181 108 aaKnown RBP8.62□□□□□ -1.03
TRUB1-201ENST00000298746 LINC01620Q4KN68 170 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 RNASE13Q5GAN3 156 aaKnown RBP8.62□□□□□ -1.03
TRUB1-201ENST00000298746 ZNRF2Q8NHG8 242 aa8.62□□□□□ -1.03
TRUB1-201ENST00000298746 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
TRUB1-201ENST00000298746 A0A0U1RRA0 63 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 H3BMM0 161 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 UBE2WQ96B02 151 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 TRAV12-2A0A075B6T6 113 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 IGHV1-69DA0A0B4J2H0 117 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 RPL13AP40429 203 aaKnown RBP8.61□□□□□ -1.03
TRUB1-201ENST00000298746 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 CCDC179H3BU77 68 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 CRLF1O75462 422 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 IGHV3-33P01772 117 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 RHPN1-AS1Q9BWJ2 59 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 PRO3102Q9H379 93 aa8.61□□□□□ -1.03
TRUB1-201ENST00000298746 LENEPQ9Y5L5 61 aa8.6□□□□□ -1.03
TRUB1-201ENST00000298746 TSHBP01222 138 aa8.6□□□□□ -1.03
TRUB1-201ENST00000298746 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
TRUB1-201ENST00000298746 BRD3OSQ6XYD6 125 aa8.6□□□□□ -1.03
TRUB1-201ENST00000298746 AJUBAQ96IF1 538 aa8.6□□□□□ -1.03
TRUB1-201ENST00000298746 MUC6Q6W4X9 2439 aa8.6□□□□□ -1.03
TRUB1-201ENST00000298746 CD28P10747 220 aa8.6□□□□□ -1.03
TRUB1-201ENST00000298746 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
TRUB1-201ENST00000298746 M0R2P5 195 aa8.59□□□□□ -1.03
TRUB1-201ENST00000298746 GPHB5Q86YW7 130 aa8.59□□□□□ -1.03
TRUB1-201ENST00000298746 Q8N6K4 173 aa8.59□□□□□ -1.03
TRUB1-201ENST00000298746 MUC4Q99102 2169 aa8.59□□□□□ -1.03
TRUB1-201ENST00000298746 Q8NA96 180 aa8.59□□□□□ -1.03
TRUB1-201ENST00000298746 KLK9Q9UKQ9 250 aa8.59□□□□□ -1.03
TRUB1-201ENST00000298746 WNK1Q9H4A3 2382 aa8.59□□□□□ -1.03
TRUB1-201ENST00000298746 IGIPA6NJ69 53 aa8.58□□□□□ -1.04
TRUB1-201ENST00000298746 ID1P41134 155 aa8.58□□□□□ -1.04
TRUB1-201ENST00000298746 DUX3Q96PT4 197 aa8.58□□□□□ -1.04
TRUB1-201ENST00000298746 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
TRUB1-201ENST00000298746 HERV-K104P63124 156 aa8.58□□□□□ -1.04
TRUB1-201ENST00000298746 MEIG1Q5JSS6 88 aa8.58□□□□□ -1.04
TRUB1-201ENST00000298746 TIMM17AQ99595 171 aa8.58□□□□□ -1.04
TRUB1-201ENST00000298746 ZNF580Q9UK33 172 aa8.58□□□□□ -1.04
TRUB1-201ENST00000298746 RHODO00212 210 aa8.57□□□□□ -1.04
TRUB1-201ENST00000298746 LEPROTO15243 131 aa8.57□□□□□ -1.04
TRUB1-201ENST00000298746 UBE2E1P51965 193 aa8.57□□□□□ -1.04
TRUB1-201ENST00000298746 CLEC2BQ92478 149 aa8.57□□□□□ -1.04
TRUB1-201ENST00000298746 SVEP1Q4LDE5 3571 aa8.57□□□□□ -1.04
TRUB1-201ENST00000298746 CENPVL3A0A0U1RRI6 287 aa8.57□□□□□ -1.04
TRUB1-201ENST00000298746 NPFFO15130 113 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms