RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 PAM16Q9Y3D7 125 aa18.75■□□□□ 0.59
SDCCAG3-201ENST00000298537 PKIAP61925 76 aa18.75■□□□□ 0.59
SDCCAG3-201ENST00000298537 TMEM70Q9BUB7 260 aa18.74■□□□□ 0.59
SDCCAG3-201ENST00000298537 LAMTOR2Q9Y2Q5 125 aa18.74■□□□□ 0.59
SDCCAG3-201ENST00000298537 FAM74A4Q5TZK3 123 aa18.73■□□□□ 0.59
SDCCAG3-201ENST00000298537 TRPT1Q86TN4 253 aaKnown RBP18.73■□□□□ 0.59
SDCCAG3-201ENST00000298537 C19orf73Q9NVV2 129 aa18.73■□□□□ 0.59
SDCCAG3-201ENST00000298537 TCAPO15273 167 aa18.73■□□□□ 0.59
SDCCAG3-201ENST00000298537 SYS1-DBNDD2H3BUS1 97 aa18.72■□□□□ 0.59
SDCCAG3-201ENST00000298537 MRAP2Q96G30 205 aa18.72■□□□□ 0.59
SDCCAG3-201ENST00000298537 PMCHL2Q9BQD1 86 aa18.72■□□□□ 0.59
SDCCAG3-201ENST00000298537 ZNF747Q9BV97 191 aa18.72■□□□□ 0.59
SDCCAG3-201ENST00000298537 DEFB104AQ8WTQ1 72 aa18.72■□□□□ 0.59
SDCCAG3-201ENST00000298537 LINC01587Q99440 93 aa18.72■□□□□ 0.59
SDCCAG3-201ENST00000298537 ZNF876PQ49A33 203 aa18.71■□□□□ 0.58
SDCCAG3-201ENST00000298537 IGHV3OR16-12A0A075B7B8 117 aa18.7■□□□□ 0.58
SDCCAG3-201ENST00000298537 BEAN1Q3B7T3 259 aa18.7■□□□□ 0.58
SDCCAG3-201ENST00000298537 TRGV11A0A075B6L2 103 aa18.69■□□□□ 0.58
SDCCAG3-201ENST00000298537 TSTD3H0UI37 97 aa18.69■□□□□ 0.58
SDCCAG3-201ENST00000298537 LBHQ53QV2 105 aaPredicted RBP18.69■□□□□ 0.58
SDCCAG3-201ENST00000298537 Q8N8P6 123 aa18.69■□□□□ 0.58
SDCCAG3-201ENST00000298537 C1orf158Q8N1D5 194 aa18.69■□□□□ 0.58
SDCCAG3-201ENST00000298537 INSP01308 110 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 CRYGDP07320 174 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 AZU1P20160 251 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 SUMO4Q6EEV6 95 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 NEGR1Q7Z3B1 354 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 VAMP8Q9BV40 100 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 NXT2Q9NPJ8 142 aaKnown RBP18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 LINC01546A6NGU7 62 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 HBDP02042 147 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 SMIM17P0DL12 118 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 POM121L12Q8N7R1 296 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 HSPB8Q9UJY1 196 aa18.68■□□□□ 0.58
SDCCAG3-201ENST00000298537 RPL35AP18077 110 aaKnown RBP18.67■□□□□ 0.58
SDCCAG3-201ENST00000298537 C18orf15Q96N68 181 aa18.67■□□□□ 0.58
SDCCAG3-201ENST00000298537 KIR2DL5BA0A0G2JN68 375 aa18.67■□□□□ 0.58
SDCCAG3-201ENST00000298537 KIR2DL5BA0A0G2JPC4 375 aa18.67■□□□□ 0.58
SDCCAG3-201ENST00000298537 F5H697 171 aa18.67■□□□□ 0.58
SDCCAG3-201ENST00000298537 GIG44P09565 113 aaPredicted RBP18.67■□□□□ 0.58
SDCCAG3-201ENST00000298537 KIR2DL5AQ8N109 375 aa18.67■□□□□ 0.58
SDCCAG3-201ENST00000298537 MAP1LC3CQ9BXW4 147 aa18.67■□□□□ 0.58
SDCCAG3-201ENST00000298537 SUMO2P61956 95 aaKnown RBP18.66■□□□□ 0.58
SDCCAG3-201ENST00000298537 TMEM158Q8WZ71 300 aa18.66■□□□□ 0.58
SDCCAG3-201ENST00000298537 PRSS47A8MTI9 375 aa18.65■□□□□ 0.58
SDCCAG3-201ENST00000298537 C11orf72Q8NBR9 251 aa18.65■□□□□ 0.58
SDCCAG3-201ENST00000298537 CLUHP3Q96NS8 147 aa18.65■□□□□ 0.58
SDCCAG3-201ENST00000298537 CITED1Q99966 193 aa18.65■□□□□ 0.58
SDCCAG3-201ENST00000298537 SMIM2Q9BVW6 85 aa18.65■□□□□ 0.58
SDCCAG3-201ENST00000298537 IGHV3-73A0A0B4J1V6 119 aa18.65■□□□□ 0.58
SDCCAG3-201ENST00000298537 SYT8Q8NBV8 401 aa18.65■□□□□ 0.58
SDCCAG3-201ENST00000298537 DEFB125Q8N687 156 aa18.63■□□□□ 0.57
SDCCAG3-201ENST00000298537 TMEM208Q9BTX3 173 aa18.63■□□□□ 0.57
SDCCAG3-201ENST00000298537 FBN1P35555 2871 aaKnown RBP18.63■□□□□ 0.57
SDCCAG3-201ENST00000298537 FCER1GP30273 86 aa18.62■□□□□ 0.57
SDCCAG3-201ENST00000298537 ZNF56Q15929 161 aa18.62■□□□□ 0.57
SDCCAG3-201ENST00000298537 SPATA45Q537H7 98 aa18.62■□□□□ 0.57
SDCCAG3-201ENST00000298537 MORN3Q6PF18 240 aaPredicted RBP18.62■□□□□ 0.57
SDCCAG3-201ENST00000298537 NUTF2P61970 127 aaKnown RBP18.61■□□□□ 0.57
SDCCAG3-201ENST00000298537 MRPL16Q9NX20 251 aaKnown RBP18.6■□□□□ 0.57
SDCCAG3-201ENST00000298537 LAGE3Q14657 143 aa18.6■□□□□ 0.57
SDCCAG3-201ENST00000298537 CSTL1Q9H114 145 aa18.6■□□□□ 0.57
SDCCAG3-201ENST00000298537 hDV102S1A0JD36 115 aa18.59■□□□□ 0.57
SDCCAG3-201ENST00000298537 PET117Q6UWS5 81 aa18.59■□□□□ 0.57
SDCCAG3-201ENST00000298537 ZNF705AQ6ZN79 300 aaPredicted RBP18.59■□□□□ 0.57
SDCCAG3-201ENST00000298537 ZNF415Q09FC8 603 aa18.58■□□□□ 0.57
SDCCAG3-201ENST00000298537 IFI27L1Q96BM0 104 aa18.58■□□□□ 0.57
SDCCAG3-201ENST00000298537 C20orf78Q9BR46 151 aa18.58■□□□□ 0.57
SDCCAG3-201ENST00000298537 NACAE9PAV3 2078 aa18.58■□□□□ 0.56
SDCCAG3-201ENST00000298537 LINC01545Q5VT33 79 aa18.58■□□□□ 0.56
SDCCAG3-201ENST00000298537 M0QY20 66 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 C20orf144Q9BQM9 153 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 M0R2P5 195 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 P0DMU3 169 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 FAM231AP0DMU4 169 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 FAM231CP0DMU5 169 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 IGLL1P15814 213 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 NDUFAF3Q9BU61 184 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 TP73-AS1Q9UF72 201 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 Q9UF83 564 aa18.57■□□□□ 0.56
SDCCAG3-201ENST00000298537 FAM110AQ9BQ89 295 aa18.56■□□□□ 0.56
SDCCAG3-201ENST00000298537 LINC00467Q9BRT7 94 aa18.56■□□□□ 0.56
SDCCAG3-201ENST00000298537 EREGO14944 169 aa18.55■□□□□ 0.56
SDCCAG3-201ENST00000298537 TRAV9-2A0A087WT02 112 aa18.55■□□□□ 0.56
SDCCAG3-201ENST00000298537 NUDT3O95989 172 aa18.55■□□□□ 0.56
SDCCAG3-201ENST00000298537 CMC4P56277 68 aaPredicted RBP18.55■□□□□ 0.56
SDCCAG3-201ENST00000298537 Q6ZSN1 163 aa18.55■□□□□ 0.56
SDCCAG3-201ENST00000298537 ST20Q9HBF5 79 aa18.55■□□□□ 0.56
SDCCAG3-201ENST00000298537 POLR2KP53803 58 aaKnown RBP18.54■□□□□ 0.56
SDCCAG3-201ENST00000298537 C20orf202A1L168 122 aa18.53■□□□□ 0.56
SDCCAG3-201ENST00000298537 KRTAP24-1Q3LI83 254 aa18.53■□□□□ 0.56
SDCCAG3-201ENST00000298537 SDHAF1A6NFY7 115 aa18.52■□□□□ 0.56
SDCCAG3-201ENST00000298537 UFSP1Q6NVU6 142 aa18.52■□□□□ 0.56
SDCCAG3-201ENST00000298537 RNASE8Q8TDE3 154 aaKnown RBP18.52■□□□□ 0.56
SDCCAG3-201ENST00000298537 DKK2Q9UBU2 259 aa18.52■□□□□ 0.56
SDCCAG3-201ENST00000298537 CFAP126Q5VTH2 177 aa18.52■□□□□ 0.56
SDCCAG3-201ENST00000298537 CSNK1G2-AS1Q8NCQ2 148 aa18.51■□□□□ 0.55
SDCCAG3-201ENST00000298537 NBEAL2Q6ZNJ1 2754 aa18.51■□□□□ 0.55
SDCCAG3-201ENST00000298537 C21orf62-AS1Q17RA5 79 aa18.5■□□□□ 0.55
SDCCAG3-201ENST00000298537 G0S2P27469 103 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms