RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ATOX1O00244 68 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 DEFB4AO15263 64 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 DAZ2Q13117 558 aaKnown RBP9.53□□□□□ -0.88
PCF11-201ENST00000298281 MLANAQ16655 118 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 C5orf24Q7Z6I8 188 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 DAZ4Q86SG3 579 aaKnown RBP9.53□□□□□ -0.88
PCF11-201ENST00000298281 DAZ3Q9NR90 486 aaKnown RBP9.53□□□□□ -0.88
PCF11-201ENST00000298281 HIGD2AQ9BW72 106 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 F8VRH5 84 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 LINC00205P59089 165 aa9.52□□□□□ -0.89
PCF11-201ENST00000298281 C5orf63A6NC05 138 aa9.52□□□□□ -0.89
PCF11-201ENST00000298281 LYPD6BQ8NI32 183 aa9.52□□□□□ -0.89
PCF11-201ENST00000298281 NTN5Q8WTR8 489 aaPredicted RBP9.52□□□□□ -0.89
PCF11-201ENST00000298281 ZNRD1Q9P1U0 126 aa9.52□□□□□ -0.89
PCF11-201ENST00000298281 H3BRN7 92 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 LENEPQ9Y5L5 61 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 KLK12Q9UKR0 248 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 IGKV1D-37A0A075B6S9 117 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 A0A1W2PPM0 123 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 K7EQD1 137 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 MRPL35Q9NZE8 188 aaKnown RBP9.51□□□□□ -0.89
PCF11-201ENST00000298281 FAM236AA0A1B0GUQ0 79 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 FAM236BA0A1B0GV22 79 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 K7EM74 188 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 ATP5G1P05496 136 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 PLA2G2AP14555 144 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 LYPD6Q86Y78 171 aa9.51□□□□□ -0.89
PCF11-201ENST00000298281 TANC1Q9C0D5 1861 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 TMEM256-PLSCR3K7ERE1 68 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 NDUFS6O75380 124 aaKnown RBP9.5□□□□□ -0.89
PCF11-201ENST00000298281 GNRH2O43555 120 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 IGLC2P0DOY2 106 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 SLURP1P55000 103 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 SERP2Q8N6R1 65 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 IGHV7-4-1A0A0J9YVY3 117 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 ARTNQ5T4W7 220 aa9.5□□□□□ -0.89
PCF11-201ENST00000298281 IGHV4-61A0A0C4DH41 118 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 CENPVL3A0A0U1RRI6 287 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 A6NED7 52 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 ZNF493Q6ZR52 646 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 KAAG1Q9UBP8 84 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 IGKV2D-26A0A0A0MRZ7 120 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.49□□□□□ -0.89
PCF11-201ENST00000298281 COX8AP10176 69 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 RNF152Q8N8N0 203 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 FHL1Q13642 323 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 Q6ZVQ6 151 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 C9orf85Q96MD7 179 aa9.49□□□□□ -0.89
PCF11-201ENST00000298281 SONP18583 2426 aaKnown RBP9.49□□□□□ -0.89
PCF11-201ENST00000298281 LOXP28300 417 aaPredicted RBP9.48□□□□□ -0.89
PCF11-201ENST00000298281 SMAD5-AS1Q9Y6J3 95 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 ZSWIM8A7E2V4 1837 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 ABCA2Q9BZC7 2435 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 PCNX3Q9H6A9 2034 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 WI2-2373I1.2A0A1W2PRP0 233 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 K7EP13 123 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 DEFB135Q30KP9 77 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 KLHDC3Q9BQ90 382 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 PRSS47A8MTI9 375 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 BPY2O14599 106 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 C17orf58Q2M2W7 97 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 Q8N9W7 124 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 SIVA1O15304 175 aa9.48□□□□□ -0.89
PCF11-201ENST00000298281 WIPF3A6NGB9 483 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 SMIM20Q8N5G0 67 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 ZNF491Q8N8L2 437 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 PTPN13Q12923 2485 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 TRAV23DV6A0A075B6W5 121 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 IGHV4-38-2P0DP08 117 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 H0YGX0 51 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 VOPP1Q96AW1 172 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 VPREB3Q9UKI3 123 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 J3KT08 172 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 IGLV1-44P01699 117 aa9.47□□□□□ -0.89
PCF11-201ENST00000298281 PRR30Q53SZ7 412 aaPredicted RBP9.47□□□□□ -0.89
PCF11-201ENST00000298281 SPAG11BQ08648 103 aa9.46□□□□□ -0.89
PCF11-201ENST00000298281 IGKV1-17P01599 117 aa9.46□□□□□ -0.89
PCF11-201ENST00000298281 UBE2D2P62837 147 aa9.46□□□□□ -0.89
PCF11-201ENST00000298281 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.46□□□□□ -0.89
PCF11-201ENST00000298281 RBAKDNA6NC62 111 aa9.46□□□□□ -0.89
PCF11-201ENST00000298281 FGF23Q9GZV9 251 aaPredicted RBP9.46□□□□□ -0.89
PCF11-201ENST00000298281 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
PCF11-201ENST00000298281 DAND5Q8N907 189 aa9.46□□□□□ -0.9
PCF11-201ENST00000298281 C11orf52Q96A22 123 aa9.46□□□□□ -0.9
PCF11-201ENST00000298281 V9GYV3 84 aa9.46□□□□□ -0.9
PCF11-201ENST00000298281 C11orf45Q8TAV5 145 aa9.45□□□□□ -0.9
PCF11-201ENST00000298281 POLR3KQ9Y2Y1 108 aaPredicted RBP9.45□□□□□ -0.9
PCF11-201ENST00000298281 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
PCF11-201ENST00000298281 FAM19A1Q7Z5A9 133 aa9.45□□□□□ -0.9
PCF11-201ENST00000298281 ZNF581Q9P0T4 197 aa9.45□□□□□ -0.9
PCF11-201ENST00000298281 CFC1BP0CG36 223 aa9.45□□□□□ -0.9
PCF11-201ENST00000298281 CFC1P0CG37 223 aa9.45□□□□□ -0.9
PCF11-201ENST00000298281 WT1-ASQ06250 92 aa9.45□□□□□ -0.9
PCF11-201ENST00000298281 ZFP36P26651 326 aaKnown RBP9.44□□□□□ -0.9
PCF11-201ENST00000298281 C12orf74Q32Q52 190 aa9.44□□□□□ -0.9
PCF11-201ENST00000298281 NUP210LQ5VU65 1888 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms