RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 ID1P41134 155 aa10.69□□□□□ -0.7
FUBP1-201ENST00000294623 MIAQ16674 131 aa10.69□□□□□ -0.7
FUBP1-201ENST00000294623 CRYGAP11844 174 aa10.68□□□□□ -0.7
FUBP1-201ENST00000294623 C15orf32Q32M92 178 aa10.68□□□□□ -0.7
FUBP1-201ENST00000294623 C22orf34Q6ZV56 151 aa10.68□□□□□ -0.7
FUBP1-201ENST00000294623 LINC00694P0DN24 101 aa10.68□□□□□ -0.7
FUBP1-201ENST00000294623 COX7CP15954 63 aa10.68□□□□□ -0.7
FUBP1-201ENST00000294623 SUMO4Q6EEV6 95 aa10.68□□□□□ -0.7
FUBP1-201ENST00000294623 IGFL3Q6UXB1 125 aa10.68□□□□□ -0.7
FUBP1-201ENST00000294623 LITAFQ99732 161 aa10.68□□□□□ -0.7
FUBP1-201ENST00000294623 IGHV7-81A0A0B4J1V7 117 aa10.67□□□□□ -0.7
FUBP1-201ENST00000294623 RNASE3P12724 160 aaKnown RBP10.67□□□□□ -0.7
FUBP1-201ENST00000294623 UBE2E1P51965 193 aa10.67□□□□□ -0.7
FUBP1-201ENST00000294623 PEMTQ9UBM1 199 aa10.67□□□□□ -0.7
FUBP1-201ENST00000294623 AHCTF1Q8WYP5 2266 aa10.67□□□□□ -0.7
FUBP1-201ENST00000294623 HERVK_113P63121 156 aa10.66□□□□□ -0.7
FUBP1-201ENST00000294623 COPS9Q8WXC6 57 aa10.66□□□□□ -0.7
FUBP1-201ENST00000294623 BEX4Q9NWD9 120 aaPredicted RBP10.66□□□□□ -0.7
FUBP1-201ENST00000294623 ATOX1O00244 68 aa10.66□□□□□ -0.7
FUBP1-201ENST00000294623 RPL39P62891 51 aaKnown RBP10.66□□□□□ -0.7
FUBP1-201ENST00000294623 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
FUBP1-201ENST00000294623 C1orf210Q8IVY1 113 aa10.66□□□□□ -0.7
FUBP1-201ENST00000294623 DAND5Q8N907 189 aa10.66□□□□□ -0.7
FUBP1-201ENST00000294623 PYGO1Q9Y3Y4 419 aa10.66□□□□□ -0.7
FUBP1-201ENST00000294623 ZGRF1Q86YA3 2104 aa10.66□□□□□ -0.7
FUBP1-201ENST00000294623 TMEM61Q8N0U2 210 aa10.65□□□□□ -0.7
FUBP1-201ENST00000294623 DUX3Q96PT4 197 aa10.65□□□□□ -0.7
FUBP1-201ENST00000294623 TIMM21Q9BVV7 248 aa10.65□□□□□ -0.7
FUBP1-201ENST00000294623 DCANP1Q8TF63 244 aa10.65□□□□□ -0.71
FUBP1-201ENST00000294623 ABCA1O95477 2261 aa10.65□□□□□ -0.71
FUBP1-201ENST00000294623 IGHV3-30-3P0DP02 117 aa10.64□□□□□ -0.71
FUBP1-201ENST00000294623 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
FUBP1-201ENST00000294623 CCDC140Q96MF4 163 aa10.64□□□□□ -0.71
FUBP1-201ENST00000294623 PLCE1Q9P212 2302 aa10.63□□□□□ -0.71
FUBP1-201ENST00000294623 IGHV1-58A0A0C4DH39 117 aa10.63□□□□□ -0.71
FUBP1-201ENST00000294623 FAM222AQ5U5X8 452 aa10.63□□□□□ -0.71
FUBP1-201ENST00000294623 E7EQL1 145 aa10.62□□□□□ -0.71
FUBP1-201ENST00000294623 I3L3M4 83 aa10.62□□□□□ -0.71
FUBP1-201ENST00000294623 INAFM2P0DMQ5 153 aa10.62□□□□□ -0.71
FUBP1-201ENST00000294623 MRPS36P82909 103 aaKnown RBP10.62□□□□□ -0.71
FUBP1-201ENST00000294623 SOCS3O14543 225 aa10.62□□□□□ -0.71
FUBP1-201ENST00000294623 HIST1H4AP62805 103 aaKnown RBP10.62□□□□□ -0.71
FUBP1-201ENST00000294623 GAGE2AQ6NT46 116 aa10.62□□□□□ -0.71
FUBP1-201ENST00000294623 Q8N9W7 124 aa10.62□□□□□ -0.71
FUBP1-201ENST00000294623 TRACP01848 142 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 TMEM258P61165 79 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 CLEC19AQ6UXS0 136 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 ARRDC1-AS1Q9H2J1 176 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 EDA2RQ9HAV5 297 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 WDR87Q6ZQQ6 2873 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 IGLV4-3A0A075B6K6 122 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 VMO1Q7Z5L0 202 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 C20orf173Q96LM9 149 aa10.61□□□□□ -0.71
FUBP1-201ENST00000294623 IGHV3OR16-8A0A075B7F1 116 aa10.6□□□□□ -0.71
FUBP1-201ENST00000294623 IGHV3-66A0A0C4DH42 116 aa10.6□□□□□ -0.71
FUBP1-201ENST00000294623 FAM223BA6NKX1 122 aa10.6□□□□□ -0.71
FUBP1-201ENST00000294623 COX7A2LO14548 114 aa10.6□□□□□ -0.71
FUBP1-201ENST00000294623 PRB3Q04118 309 aaPredicted RBP10.6□□□□□ -0.71
FUBP1-201ENST00000294623 FAM19A5Q7Z5A7 132 aaPredicted RBP10.6□□□□□ -0.71
FUBP1-201ENST00000294623 FAM223AQ8IWN6 122 aa10.6□□□□□ -0.71
FUBP1-201ENST00000294623 NDUFA12Q9UI09 145 aa10.6□□□□□ -0.71
FUBP1-201ENST00000294623 LINC00527Q9UJ94 153 aa10.6□□□□□ -0.71
FUBP1-201ENST00000294623 KLLNB2CW77 178 aa10.6□□□□□ -0.71
FUBP1-201ENST00000294623 TRAV25A0A0B4J276 109 aa10.59□□□□□ -0.71
FUBP1-201ENST00000294623 IGHV3-35A0A0C4DH35 117 aa10.59□□□□□ -0.71
FUBP1-201ENST00000294623 F5H697 171 aa10.59□□□□□ -0.71
FUBP1-201ENST00000294623 GNRH2O43555 120 aa10.59□□□□□ -0.71
FUBP1-201ENST00000294623 PRSS2P07478 247 aa10.59□□□□□ -0.71
FUBP1-201ENST00000294623 CLEC2BQ92478 149 aa10.59□□□□□ -0.71
FUBP1-201ENST00000294623 A0A0J9YXV3 536 aa10.58□□□□□ -0.72
FUBP1-201ENST00000294623 VCANP13611 3396 aa10.58□□□□□ -0.72
FUBP1-201ENST00000294623 TINCRA0A1B0GVN0 87 aa10.58□□□□□ -0.72
FUBP1-201ENST00000294623 M0QY20 66 aa10.58□□□□□ -0.72
FUBP1-201ENST00000294623 ZNF415Q09FC8 603 aa10.58□□□□□ -0.72
FUBP1-201ENST00000294623 TRAV8-3A0A0A6YYJ7 113 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 NDUFA4O00483 81 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 ATP5J2P56134 94 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 PLA2G2CQ5R387 149 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 VSIG2Q96IQ7 327 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 C2orf48Q96LS8 159 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 IGF1P05019 195 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 CIRBPQ14011 172 aaKnown RBP10.57□□□□□ -0.72
FUBP1-201ENST00000294623 ECSCRQ19T08 205 aa10.57□□□□□ -0.72
FUBP1-201ENST00000294623 DEFB109BQ30KR1 87 aa10.56□□□□□ -0.72
FUBP1-201ENST00000294623 OVOL2Q9BRP0 275 aa10.56□□□□□ -0.72
FUBP1-201ENST00000294623 ATP6V0E1O15342 81 aa10.56□□□□□ -0.72
FUBP1-201ENST00000294623 IGF2-ASQ6U949 168 aa10.56□□□□□ -0.72
FUBP1-201ENST00000294623 LPAL2Q16609 132 aa10.55□□□□□ -0.72
FUBP1-201ENST00000294623 CEMP1Q6PRD7 247 aaPredicted RBP10.55□□□□□ -0.72
FUBP1-201ENST00000294623 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
FUBP1-201ENST00000294623 UBTD1Q9HAC8 227 aa10.54□□□□□ -0.72
FUBP1-201ENST00000294623 ICE1Q9Y2F5 2266 aa10.54□□□□□ -0.72
FUBP1-201ENST00000294623 IGHV3OR16-13A0A075B7E8 117 aa10.54□□□□□ -0.72
FUBP1-201ENST00000294623 IGHV3-74A0A0B4J1X5 117 aa10.54□□□□□ -0.72
FUBP1-201ENST00000294623 NDUFA1O15239 70 aa10.54□□□□□ -0.72
FUBP1-201ENST00000294623 ADAMTSL4-AS1Q5T5F5 129 aa10.54□□□□□ -0.72
FUBP1-201ENST00000294623 IGHV3-64A0A075B6Q5 118 aa10.53□□□□□ -0.72
FUBP1-201ENST00000294623 PF4V1P10720 104 aa10.53□□□□□ -0.72
FUBP1-201ENST00000294623 CD28P10747 220 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms