RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 A0A0J9YY99 117 aa8.71□□□□□ -1.01
USP6NL-201ENST00000277575 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.01
USP6NL-201ENST00000277575 DLEU1O43261 78 aa8.71□□□□□ -1.01
USP6NL-201ENST00000277575 A6NDX4 124 aa8.71□□□□□ -1.02
USP6NL-201ENST00000277575 P0C879 139 aa8.71□□□□□ -1.02
USP6NL-201ENST00000277575 RNASE13Q5GAN3 156 aaKnown RBP8.71□□□□□ -1.02
USP6NL-201ENST00000277575 MRAPQ8TCY5 172 aa8.71□□□□□ -1.02
USP6NL-201ENST00000277575 A0A1B0GV72 72 aa8.71□□□□□ -1.02
USP6NL-201ENST00000277575 TMEM89A2RUT3 159 aa8.71□□□□□ -1.02
USP6NL-201ENST00000277575 TRAV8-3A0A0A6YYJ7 113 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 BRWD1-AS2P59051 145 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 ADAMTSL5Q6ZMM2 481 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 ZMAT4Q9H898 229 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 CEP192Q8TEP8 1941 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 NXPH4O95158 308 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 TRAV8-4A0A0B4J246 113 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 MRPL52Q86TS9 123 aaKnown RBP8.7□□□□□ -1.02
USP6NL-201ENST00000277575 ZNF747Q9BV97 191 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 DMXL1Q9Y485 3027 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 UNQ9165/PRO28630Q6UXU0 137 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 RNF152Q8N8N0 203 aa8.7□□□□□ -1.02
USP6NL-201ENST00000277575 EREGO14944 169 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 DKK2Q9UBU2 259 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 PRSS29PA6NIE9 313 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 ODF3BA8MYP8 253 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 COX8AP10176 69 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 ATG2AQ2TAZ0 1938 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 CLPSL1A2RUU4 121 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 J3QQQ9 107 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 DEFB1P60022 68 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 KLF12Q9Y4X4 402 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 ALPK3Q96L96 1907 aa8.69□□□□□ -1.02
USP6NL-201ENST00000277575 TRBV12-3P01733 135 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 HERVK_113P63121 156 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 CLPSL2Q6UWE3 100 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 TMEM61Q8N0U2 210 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 C11orf1Q9H5F2 150 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 PKD1L2Q7Z442 2459 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 K7EMI3 77 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 ZNF48Q96MX3 618 aaPredicted RBP8.68□□□□□ -1.02
USP6NL-201ENST00000277575 CITED2Q99967 270 aaPredicted RBP8.68□□□□□ -1.02
USP6NL-201ENST00000277575 ARHGAP32A7KAX9 2087 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 MTORP42345 2549 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 LINC01548A6NM66 108 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 MYCNOSP40205 109 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 C9JAW5 83 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 C9orf47Q6ZRZ4 202 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 OVOL2Q9BRP0 275 aa8.68□□□□□ -1.02
USP6NL-201ENST00000277575 FSTL3O95633 263 aa8.67□□□□□ -1.02
USP6NL-201ENST00000277575 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
USP6NL-201ENST00000277575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.67□□□□□ -1.02
USP6NL-201ENST00000277575 IGKV2-29A2NJV5 120 aaPredicted RBP8.67□□□□□ -1.02
USP6NL-201ENST00000277575 IGKV1D-37A0A075B6S9 117 aa8.67□□□□□ -1.02
USP6NL-201ENST00000277575 Q8N1Y9 231 aa8.67□□□□□ -1.02
USP6NL-201ENST00000277575 TRAV25A0A0B4J276 109 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 COA6Q5JTJ3 125 aaKnown RBP8.66□□□□□ -1.02
USP6NL-201ENST00000277575 WFDC11Q8NEX6 87 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 SNHG12Q9BXW3 62 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 F8WEM9 126 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 SPART-AS1P0CW21 52 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 SUMO4Q6EEV6 95 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 C1orf229Q6ZS94 237 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-201ENST00000277575 LRRC75A-AS1Q8N1F1 130 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 C16orf74Q96GX8 76 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 DSCAML1Q8TD84 2053 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 DNAJC9-AS1A6NH13 148 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 SPINK8P0C7L1 97 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 RMI2Q96E14 147 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 DNAJC30Q96LL9 226 aa8.66□□□□□ -1.02
USP6NL-201ENST00000277575 XCL1P47992 114 aa8.65□□□□□ -1.02
USP6NL-201ENST00000277575 SIGMAR1Q99720 223 aa8.65□□□□□ -1.02
USP6NL-201ENST00000277575 MUC22E2RYF6 1773 aaPredicted RBP8.65□□□□□ -1.02
USP6NL-201ENST00000277575 H3BMM0 161 aa8.65□□□□□ -1.03
USP6NL-201ENST00000277575 IGHG4P01861 327 aa8.65□□□□□ -1.03
USP6NL-201ENST00000277575 ATP5G1P05496 136 aa8.65□□□□□ -1.03
USP6NL-201ENST00000277575 UBE2WQ96B02 151 aa8.65□□□□□ -1.03
USP6NL-201ENST00000277575 CCDC140Q96MF4 163 aa8.65□□□□□ -1.03
USP6NL-201ENST00000277575 GYPEP15421 78 aa8.64□□□□□ -1.03
USP6NL-201ENST00000277575 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
USP6NL-201ENST00000277575 Q6ZQT7 251 aa8.64□□□□□ -1.03
USP6NL-201ENST00000277575 C4orf3Q8WVX3 66 aa8.64□□□□□ -1.03
USP6NL-201ENST00000277575 TNRC6AQ8NDV7 1962 aaKnown RBP8.64□□□□□ -1.03
USP6NL-201ENST00000277575 MRPL23Q16540 153 aaKnown RBP8.63□□□□□ -1.03
USP6NL-201ENST00000277575 ZNF843Q8N446 348 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 ATP6V0E2Q8NHE4 81 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 ZNF503Q96F45 646 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 SPANXA1Q9NS26 97 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 TANC2Q9HCD6 1990 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 IGF1P05019 195 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 IGHV4-31P0DP07 118 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 C11orf71Q6IPW1 123 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 IGKV2D-24A0A075B6R9 120 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 A0A0J9YX75 114 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 GAGE2BQ13066 116 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 C5orf38Q86SI9 138 aa8.63□□□□□ -1.03
USP6NL-201ENST00000277575 ESM1Q9NQ30 184 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms