RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 FHL2Q14192 279 aa6.96□□□□□ -1.29
PDGFC-201ENST00000274071 IGKV1-17P01599 117 aa6.96□□□□□ -1.3
PDGFC-201ENST00000274071 C1orf195Q5TG92 126 aa6.96□□□□□ -1.3
PDGFC-201ENST00000274071 PRR14LQ5THK1 2151 aa6.96□□□□□ -1.3
PDGFC-201ENST00000274071 IGKV3D-20A0A0C4DH25 116 aa6.96□□□□□ -1.3
PDGFC-201ENST00000274071 I3L3M4 83 aa6.96□□□□□ -1.3
PDGFC-201ENST00000274071 IGLV2-23P01705 113 aa6.96□□□□□ -1.3
PDGFC-201ENST00000274071 DLX1P56177 255 aa6.96□□□□□ -1.3
PDGFC-201ENST00000274071 ZNF491Q8N8L2 437 aa6.96□□□□□ -1.3
PDGFC-201ENST00000274071 TIMM8AO60220 97 aaPredicted RBP6.95□□□□□ -1.3
PDGFC-201ENST00000274071 PDE6HQ13956 83 aa6.95□□□□□ -1.3
PDGFC-201ENST00000274071 MRGPRG-AS1Q2M3A8 158 aa6.95□□□□□ -1.3
PDGFC-201ENST00000274071 ZNF833PQ6ZTB9 187 aa6.95□□□□□ -1.3
PDGFC-201ENST00000274071 PRIMA1Q86XR5 153 aa6.95□□□□□ -1.3
PDGFC-201ENST00000274071 WFDC11Q8NEX6 87 aa6.95□□□□□ -1.3
PDGFC-201ENST00000274071 DSPP15924 2871 aaKnown RBP6.95□□□□□ -1.3
PDGFC-201ENST00000274071 TRGV5A0A0B4J1U4 118 aa6.95□□□□□ -1.3
PDGFC-201ENST00000274071 SRRM5B3KS81 715 aa6.95□□□□□ -1.3
PDGFC-201ENST00000274071 C16orf95Q9H693 158 aa6.95□□□□□ -1.3
PDGFC-201ENST00000274071 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 CDSNQ15517 529 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 IGFL4Q6B9Z1 124 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 LINC01561Q8N1V8 128 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 FDCSPQ8NFU4 85 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
PDGFC-201ENST00000274071 C11orf21Q9P2W6 132 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 SPRR3Q9UBC9 169 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 DSCAMO60469 2012 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 A0A0U1RQV1 116 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 SYNJ2BPP57105 145 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 NPC2P61916 151 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 GVINP1Q7Z2Y8 2422 aa6.94□□□□□ -1.3
PDGFC-201ENST00000274071 IGHV7-4-1A0A0J9YVY3 117 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 PSMB8P28062 276 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 C9orf139Q6ZV77 190 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 KALRNO60229 2985 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 CEP250Q9BV73 2442 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 IGIPA6NJ69 53 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 RNF223E7ERA6 249 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 NACAE9PAV3 2078 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 A0A087WVE0 104 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 DAZ2Q13117 558 aaKnown RBP6.93□□□□□ -1.3
PDGFC-201ENST00000274071 SPANXN1Q5VSR9 72 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 DAZ4Q86SG3 579 aaKnown RBP6.93□□□□□ -1.3
PDGFC-201ENST00000274071 FAM223AQ8IWN6 122 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 RNF125Q96EQ8 232 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 DYNLRB1Q9NP97 96 aa6.93□□□□□ -1.3
PDGFC-201ENST00000274071 DAZ1Q9NQZ3 744 aaKnown RBP6.93□□□□□ -1.3
PDGFC-201ENST00000274071 DAZ3Q9NR90 486 aaKnown RBP6.93□□□□□ -1.3
PDGFC-201ENST00000274071 TRAV12-2A0A075B6T6 113 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 TIRAPP58753 221 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 FAM201AQ5SY85 155 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 PRRC2AP48634 2157 aaKnown RBP6.92□□□□□ -1.3
PDGFC-201ENST00000274071 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 IGHV3OR16-10A0A075B7F0 116 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 TMEM178BH3BS89 294 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 LEPROTO15243 131 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 TMEM200BQ69YZ2 307 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 C16orf92Q96LL3 132 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 SLC50A1Q9BRV3 221 aa6.92□□□□□ -1.3
PDGFC-201ENST00000274071 AKAP13Q12802 2813 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 USP17L23D6RBM5 183 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 I3L2K1 104 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 ZNF876PQ49A33 203 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 DEFB104AQ8WTQ1 72 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 IGHV4-4A0A075B6R2 117 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 NDUFC2-KCTD14E9PQ53 114 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 DEFB109BQ30KR1 87 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 IL17DQ8TAD2 202 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 LITAFQ99732 161 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 TP53TG1Q9Y2A0 90 aa6.91□□□□□ -1.3
PDGFC-201ENST00000274071 TRAV12-3A0A0B4J271 114 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 IGKV3D-7A0A0C4DH55 119 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 RPL27AP46776 148 aaKnown RBP6.9□□□□□ -1.3
PDGFC-201ENST00000274071 IGFL2Q6UWQ7 119 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 FP248Q71RG6 208 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-201ENST00000274071 DAND5Q8N907 189 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 PRSS33Q8NF86 280 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 LINC00574Q9H8X3 128 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 NDUFC2O95298 119 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 RPL39P62891 51 aaKnown RBP6.9□□□□□ -1.3
PDGFC-201ENST00000274071 VMA21Q3ZAQ7 101 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 ADAMTSL4-AS1Q5T5F5 129 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 DYNAPQ8N1N2 210 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 ZNF580Q9UK33 172 aa6.9□□□□□ -1.3
PDGFC-201ENST00000274071 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.31
PDGFC-201ENST00000274071 FAM223BA6NKX1 122 aa6.9□□□□□ -1.31
PDGFC-201ENST00000274071 C22orf24Q9Y442 160 aa6.9□□□□□ -1.31
PDGFC-201ENST00000274071 A0A0J9YX75 114 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 BRK1Q8WUW1 75 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 SIRPDQ9H106 197 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 IGHV1-69DA0A0B4J2H0 117 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 PRAC2D3DTV9 90 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 BUB3O43684 328 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 LOXP28300 417 aaPredicted RBP6.89□□□□□ -1.31
PDGFC-201ENST00000274071 NBL1P41271 181 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 CIRBPQ14011 172 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms