RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CDSNQ15517 529 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 J3QQQ9 107 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
TIMP3-201ENST00000266085 TRAV8-3A0A0A6YYJ7 113 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 HERVK_113P63121 156 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 ADAMTSL5Q6ZMM2 481 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 LAMTOR3Q9UHA4 124 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 OVOL2Q9BRP0 275 aa11.85□□□□□ -0.51
TIMP3-201ENST00000266085 RNASE13Q5GAN3 156 aaKnown RBP11.84□□□□□ -0.51
TIMP3-201ENST00000266085 CLPSL1A2RUU4 121 aa11.84□□□□□ -0.51
TIMP3-201ENST00000266085 MRAPQ8TCY5 172 aa11.84□□□□□ -0.51
TIMP3-201ENST00000266085 DNAJC9-AS1A6NH13 148 aa11.83□□□□□ -0.51
TIMP3-201ENST00000266085 TMEM61Q8N0U2 210 aa11.83□□□□□ -0.51
TIMP3-201ENST00000266085 IGHV4-31P0DP07 118 aa11.83□□□□□ -0.52
TIMP3-201ENST00000266085 C9JAW5 83 aa11.83□□□□□ -0.52
TIMP3-201ENST00000266085 PIFOQ8TCI5 191 aa11.83□□□□□ -0.52
TIMP3-201ENST00000266085 RPL39LQ96EH5 51 aaKnown RBP11.83□□□□□ -0.52
TIMP3-201ENST00000266085 ZNF295-AS1Q8N0V1 137 aa11.82□□□□□ -0.52
TIMP3-201ENST00000266085 KIAA1549Q9HCM3 1950 aa11.82□□□□□ -0.52
TIMP3-201ENST00000266085 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
TIMP3-201ENST00000266085 A0A0J9YY99 117 aa11.82□□□□□ -0.52
TIMP3-201ENST00000266085 Q8N1Y9 231 aa11.82□□□□□ -0.52
TIMP3-201ENST00000266085 ZNF503Q96F45 646 aa11.82□□□□□ -0.52
TIMP3-201ENST00000266085 TRAV25A0A0B4J276 109 aa11.82□□□□□ -0.52
TIMP3-201ENST00000266085 EIF4EBP1Q13541 118 aaPredicted RBP11.82□□□□□ -0.52
TIMP3-201ENST00000266085 CCDC140Q96MF4 163 aa11.82□□□□□ -0.52
TIMP3-201ENST00000266085 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
TIMP3-201ENST00000266085 NXPH4O95158 308 aa11.81□□□□□ -0.52
TIMP3-201ENST00000266085 ZNF124Q15973 351 aa11.81□□□□□ -0.52
TIMP3-201ENST00000266085 MYCNOSP40205 109 aa11.81□□□□□ -0.52
TIMP3-201ENST00000266085 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
TIMP3-201ENST00000266085 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
TIMP3-201ENST00000266085 IGHG4P01861 327 aa11.8□□□□□ -0.52
TIMP3-201ENST00000266085 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
TIMP3-201ENST00000266085 DNAJC30Q96LL9 226 aa11.8□□□□□ -0.52
TIMP3-201ENST00000266085 HCFC1P51610 2035 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 TRBV20-1A0A075B6N2 111 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 TRBV6-1A0A0K0K1D8 114 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 NUPR1O60356 82 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 IGF1P05019 195 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 MAJINQ3KP22 176 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 ZMAT4Q9H898 229 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 SPANXA1Q9NS26 97 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 SPINK8P0C7L1 97 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 CTRLP40313 264 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 CLPSL2Q6UWE3 100 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 C4orf3Q8WVX3 66 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 TAL2Q16559 108 aa11.79□□□□□ -0.52
TIMP3-201ENST00000266085 LY6LH3BQJ8 138 aa11.78□□□□□ -0.52
TIMP3-201ENST00000266085 EBI3Q14213 229 aa11.78□□□□□ -0.52
TIMP3-201ENST00000266085 BVES-AS1Q5T3Y7 98 aa11.78□□□□□ -0.52
TIMP3-201ENST00000266085 PRO1854Q9UHT4 67 aa11.78□□□□□ -0.52
TIMP3-201ENST00000266085 C9orf118A6NHY6 69 aa11.77□□□□□ -0.52
TIMP3-201ENST00000266085 A0A0J9YX75 114 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 C19orf71A6NCJ1 209 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 Q6YL49 198 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 SIVA1O15304 175 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 SPART-AS1P0CW21 52 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 GAGE2BQ13066 116 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 GAGE2EQ4V326 116 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 GAGE2DQ9UEU5 116 aa11.77□□□□□ -0.53
TIMP3-201ENST00000266085 ACANP16112 2415 aa11.76□□□□□ -0.53
TIMP3-201ENST00000266085 ATP5G1P05496 136 aa11.76□□□□□ -0.53
TIMP3-201ENST00000266085 MED14OSP0DP75 135 aa11.76□□□□□ -0.53
TIMP3-201ENST00000266085 XCL1P47992 114 aa11.76□□□□□ -0.53
TIMP3-201ENST00000266085 RMI2Q96E14 147 aa11.76□□□□□ -0.53
TIMP3-201ENST00000266085 CRYGBP07316 175 aa11.76□□□□□ -0.53
TIMP3-201ENST00000266085 DSCAML1Q8TD84 2053 aa11.76□□□□□ -0.53
TIMP3-201ENST00000266085 FGF6P10767 208 aa11.75□□□□□ -0.53
TIMP3-201ENST00000266085 F8WEM9 126 aa11.75□□□□□ -0.53
TIMP3-201ENST00000266085 GYPEP15421 78 aa11.75□□□□□ -0.53
TIMP3-201ENST00000266085 LINC00173Q6ZV60 143 aa11.75□□□□□ -0.53
TIMP3-201ENST00000266085 PCP2Q8IVA1 136 aa11.75□□□□□ -0.53
TIMP3-201ENST00000266085 CEND1Q8N111 149 aa11.75□□□□□ -0.53
TIMP3-201ENST00000266085 ATP6V0E2Q8NHE4 81 aa11.75□□□□□ -0.53
TIMP3-201ENST00000266085 FLNBO75369 2602 aaKnown RBP11.75□□□□□ -0.53
TIMP3-201ENST00000266085 FRMD6-AS1P0C7T7 363 aa11.75□□□□□ -0.53
TIMP3-201ENST00000266085 MRPL23Q16540 153 aaKnown RBP11.74□□□□□ -0.53
TIMP3-201ENST00000266085 OCIAD2Q56VL3 154 aa11.74□□□□□ -0.53
TIMP3-201ENST00000266085 K7EQD1 137 aa11.74□□□□□ -0.53
TIMP3-201ENST00000266085 NKAPP1Q8N9T2 125 aa11.74□□□□□ -0.53
TIMP3-201ENST00000266085 LINC01545Q5VT33 79 aa11.74□□□□□ -0.53
TIMP3-201ENST00000266085 CDPF1Q6NVV7 123 aa11.74□□□□□ -0.53
TIMP3-201ENST00000266085 DAZ2Q13117 558 aaKnown RBP11.73□□□□□ -0.53
TIMP3-201ENST00000266085 DAZ4Q86SG3 579 aaKnown RBP11.73□□□□□ -0.53
TIMP3-201ENST00000266085 DAZ3Q9NR90 486 aaKnown RBP11.73□□□□□ -0.53
TIMP3-201ENST00000266085 A0A0J9YXV3 536 aa11.73□□□□□ -0.53
TIMP3-201ENST00000266085 H3BMM0 161 aa11.73□□□□□ -0.53
TIMP3-201ENST00000266085 Q6ZQT7 251 aa11.73□□□□□ -0.53
TIMP3-201ENST00000266085 UBE2WQ96B02 151 aa11.73□□□□□ -0.53
TIMP3-201ENST00000266085 TEX48A0A1B0GUV7 120 aa11.73□□□□□ -0.53
TIMP3-201ENST00000266085 ESM1Q9NQ30 184 aa11.73□□□□□ -0.53
TIMP3-201ENST00000266085 Q9H8V8 135 aa11.72□□□□□ -0.53
TIMP3-201ENST00000266085 KIR2DL5BA0A0G2JN68 375 aa11.72□□□□□ -0.53
TIMP3-201ENST00000266085 KIR2DL5BA0A0G2JPC4 375 aa11.72□□□□□ -0.53
TIMP3-201ENST00000266085 INAFM1C9JVW0 142 aa11.72□□□□□ -0.53
TIMP3-201ENST00000266085 ETDBQ3ZM63 59 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms