RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 G3V4G9 280 aa16.52■□□□□ 0.23
SMARCB1-201ENST00000263121 NPYP01303 97 aa16.52■□□□□ 0.23
SMARCB1-201ENST00000263121 SMIM17P0DL12 118 aa16.52■□□□□ 0.23
SMARCB1-201ENST00000263121 SAMD5Q5TGI4 173 aa16.52■□□□□ 0.23
SMARCB1-201ENST00000263121 TRAV26-2A0A0B4J265 109 aa16.51■□□□□ 0.23
SMARCB1-201ENST00000263121 CRYGDP07320 174 aa16.51■□□□□ 0.23
SMARCB1-201ENST00000263121 C16orf74Q96GX8 76 aa16.51■□□□□ 0.23
SMARCB1-201ENST00000263121 URB1-AS1Q96HZ7 61 aa16.51■□□□□ 0.23
SMARCB1-201ENST00000263121 A0A087WWL8 130 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 MGPP08493 103 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 GATA1P15976 413 aaPredicted RBP16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 S100A2P29034 98 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 SAMD10Q9BYL1 202 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 PLAC8L1A1L4L8 177 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 RRN3P1Q2M238 152 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 NIT1Q86X76 327 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 NRACQ8N912 160 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 HIST1H2BLQ99880 126 aa16.5■□□□□ 0.23
SMARCB1-201ENST00000263121 TNFRSF6BO95407 300 aa16.49■□□□□ 0.23
SMARCB1-201ENST00000263121 LURAP1LQ8IV03 231 aa16.49■□□□□ 0.23
SMARCB1-201ENST00000263121 RASL10AQ92737 203 aa16.49■□□□□ 0.23
SMARCB1-201ENST00000263121 NDUFAF3Q9BU61 184 aa16.49■□□□□ 0.23
SMARCB1-201ENST00000263121 MRPL16Q9NX20 251 aaKnown RBP16.48■□□□□ 0.23
SMARCB1-201ENST00000263121 A8MWV9 139 aa16.47■□□□□ 0.23
SMARCB1-201ENST00000263121 A8MZ25 164 aa16.47■□□□□ 0.23
SMARCB1-201ENST00000263121 DAZ2Q13117 558 aaKnown RBP16.47■□□□□ 0.23
SMARCB1-201ENST00000263121 FABP4P15090 132 aa16.46■□□□□ 0.23
SMARCB1-201ENST00000263121 FAM74A4Q5TZK3 123 aa16.46■□□□□ 0.23
SMARCB1-201ENST00000263121 RNASEKQ6P5S7 137 aaKnown RBP16.46■□□□□ 0.23
SMARCB1-201ENST00000263121 CHCHD1Q96BP2 118 aaKnown RBP16.46■□□□□ 0.23
SMARCB1-201ENST00000263121 X6R8D5 127 aa16.46■□□□□ 0.23
SMARCB1-201ENST00000263121 PKD1L1Q8TDX9 2849 aa16.46■□□□□ 0.23
SMARCB1-201ENST00000263121 TMEM18Q96B42 140 aa16.46■□□□□ 0.23
SMARCB1-201ENST00000263121 LINC00614P0C842 121 aa16.45■□□□□ 0.22
SMARCB1-201ENST00000263121 SUMO4Q6EEV6 95 aa16.45■□□□□ 0.22
SMARCB1-201ENST00000263121 UFSP1Q6NVU6 142 aa16.45■□□□□ 0.22
SMARCB1-201ENST00000263121 MAP1LC3AQ9H492 121 aa16.45■□□□□ 0.22
SMARCB1-201ENST00000263121 DNAH3Q8TD57 4116 aa16.45■□□□□ 0.22
SMARCB1-201ENST00000263121 LOC389332A0A1B0GUA5 103 aa16.44■□□□□ 0.22
SMARCB1-201ENST00000263121 PRSS47A8MTI9 375 aa16.44■□□□□ 0.22
SMARCB1-201ENST00000263121 IFI27P40305 119 aaPredicted RBP16.44■□□□□ 0.22
SMARCB1-201ENST00000263121 AKR1D1P51857 326 aa16.44■□□□□ 0.22
SMARCB1-201ENST00000263121 LGALS9BQ3B8N2 356 aa16.44■□□□□ 0.22
SMARCB1-201ENST00000263121 CFAP126Q5VTH2 177 aa16.44■□□□□ 0.22
SMARCB1-201ENST00000263121 SMIM9A6NGZ8 99 aa16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 DEFB135Q30KP9 77 aa16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 PRSS3P2Q8NHM4 247 aa16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 PACRGQ96M98 296 aaPredicted RBP16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 OVOL2Q9BRP0 275 aa16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 NOP10Q9NPE3 64 aaKnown RBP16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 TRGV1A0A0A0MS02 117 aa16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 RS1O15537 224 aa16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 HSBP1O75506 76 aa16.43■□□□□ 0.22
SMARCB1-201ENST00000263121 F5H697 171 aa16.42■□□□□ 0.22
SMARCB1-201ENST00000263121 ZNF56Q15929 161 aa16.42■□□□□ 0.22
SMARCB1-201ENST00000263121 Q6ZTI0 123 aa16.42■□□□□ 0.22
SMARCB1-201ENST00000263121 RPL39LQ96EH5 51 aaKnown RBP16.42■□□□□ 0.22
SMARCB1-201ENST00000263121 FA2HQ7L5A8 372 aa16.41■□□□□ 0.22
SMARCB1-201ENST00000263121 PPP1R17O96001 155 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 PMCHP20382 165 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 AMTP48728 403 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 Q6ZWC4 215 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 FAM19A2Q8N3H0 131 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 OR10D4PQ8NGN7 298 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 AP5S1Q9NUS5 200 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 IGLV2-18A0A075B6J9 118 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 M0QY20 66 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 RHODO00212 210 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 C20orf78Q9BR46 151 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 EDA2RQ9HAV5 297 aa16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 NXT2Q9NPJ8 142 aaKnown RBP16.4■□□□□ 0.22
SMARCB1-201ENST00000263121 NACAE9PAV3 2078 aa16.39■□□□□ 0.21
SMARCB1-201ENST00000263121 LINC01546A6NGU7 62 aa16.39■□□□□ 0.21
SMARCB1-201ENST00000263121 RNF183Q96D59 192 aa16.39■□□□□ 0.21
SMARCB1-201ENST00000263121 SUMO2P61956 95 aaKnown RBP16.38■□□□□ 0.21
SMARCB1-201ENST00000263121 ZFP2Q6ZN57 461 aa16.38■□□□□ 0.21
SMARCB1-201ENST00000263121 IGHV3-73A0A0B4J1V6 119 aa16.37■□□□□ 0.21
SMARCB1-201ENST00000263121 IGHV1-24A0A0C4DH33 117 aa16.37■□□□□ 0.21
SMARCB1-201ENST00000263121 Q8N8P6 123 aa16.37■□□□□ 0.21
SMARCB1-201ENST00000263121 OR11H2Q8NH07 326 aa16.37■□□□□ 0.21
SMARCB1-201ENST00000263121 SMIM2Q9BVW6 85 aa16.37■□□□□ 0.21
SMARCB1-201ENST00000263121 TRAV4A0A0B4J268 109 aa16.36■□□□□ 0.21
SMARCB1-201ENST00000263121 TRBV6-5A0A0K0K1A5 114 aa16.36■□□□□ 0.21
SMARCB1-201ENST00000263121 PMCHL1Q16048 86 aa16.36■□□□□ 0.21
SMARCB1-201ENST00000263121 KPRPQ5T749 579 aaPredicted RBP16.36■□□□□ 0.21
SMARCB1-201ENST00000263121 OR4C5Q8NGB2 326 aa16.36■□□□□ 0.21
SMARCB1-201ENST00000263121 EMP1P54849 157 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 RPL32P62910 135 aaKnown RBP16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 Q6ZSN1 163 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 GAGE12BA1L429 117 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 H7C1H1 209 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 GAGE7O76087 117 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 GAGE12FP0CL80 117 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 GAGE12GP0CL81 117 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 GAGE12IP0CL82 117 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 LINC00612Q8N6U2 182 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 ZNF479Q96JC4 524 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 ST20Q9HBF5 79 aa16.34■□□□□ 0.21
SMARCB1-201ENST00000263121 IGHV3-53P01767 116 aa16.33■□□□□ 0.2
SMARCB1-201ENST00000263121 MIFP14174 115 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms