RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 DLEU1O43261 78 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 PLNP26678 52 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 LINC00315P59091 139 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 BVES-AS1Q5T3Y7 98 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 KIR2DL4Q99706 377 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 SPAG8Q99932 426 aaPredicted RBP11.19□□□□□ -0.62
DDX49-201ENST00000247003 JPT2Q9H910 190 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 TRAV12-1A0A0B4J245 112 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 H3BMM0 161 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 FGF6P10767 208 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 GAGE1Q13065 139 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 C2orf66Q6UXQ4 117 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 RAX2Q96IS3 184 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 MAP6D1Q9H9H5 199 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 ESM1Q9NQ30 184 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 TMEM160Q9NX00 188 aa11.19□□□□□ -0.62
DDX49-201ENST00000247003 MUC4Q99102 2169 aa11.18□□□□□ -0.62
DDX49-201ENST00000247003 A8MTW9 85 aa11.18□□□□□ -0.62
DDX49-201ENST00000247003 SIVA1O15304 175 aa11.18□□□□□ -0.62
DDX49-201ENST00000247003 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
DDX49-201ENST00000247003 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
DDX49-201ENST00000247003 TMEM97Q5BJF2 176 aa11.18□□□□□ -0.62
DDX49-201ENST00000247003 C2orf91Q6ZV80 131 aa11.18□□□□□ -0.62
DDX49-201ENST00000247003 MRPL35Q9NZE8 188 aaKnown RBP11.18□□□□□ -0.62
DDX49-201ENST00000247003 A0A1W2PRX2 142 aa11.17□□□□□ -0.62
DDX49-201ENST00000247003 H7C1H1 209 aa11.17□□□□□ -0.62
DDX49-201ENST00000247003 VCYO14598 125 aa11.17□□□□□ -0.62
DDX49-201ENST00000247003 ZC2HC1BQ5TFG8 222 aa11.17□□□□□ -0.62
DDX49-201ENST00000247003 CYSLTR1Q9Y271 337 aa11.17□□□□□ -0.62
DDX49-201ENST00000247003 HECTD1Q9ULT8 2610 aa11.17□□□□□ -0.62
DDX49-201ENST00000247003 TEX15Q9BXT5 2789 aa11.17□□□□□ -0.62
DDX49-201ENST00000247003 TRAV25A0A0B4J276 109 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 RNASE1P07998 156 aaKnown RBP11.16□□□□□ -0.62
DDX49-201ENST00000247003 HTN1P15515 57 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 KRTAP1-1Q07627 177 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 CD300EQ496F6 205 aaPredicted RBP11.16□□□□□ -0.62
DDX49-201ENST00000247003 TRPT1Q86TN4 253 aaKnown RBP11.16□□□□□ -0.62
DDX49-201ENST00000247003 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 MXRA5Q9NR99 2828 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 F8VRH5 84 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 CCL24O00175 119 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 ERASQ7Z444 233 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 ZNF418Q8TF45 676 aaPredicted RBP11.16□□□□□ -0.62
DDX49-201ENST00000247003 ORAOV1Q8WV07 137 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 HHLA3Q9XRX5 114 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 CHTOPQ9Y3Y2 248 aaKnown RBP11.16□□□□□ -0.62
DDX49-201ENST00000247003 TSSC4Q9Y5U2 329 aaPredicted RBP11.16□□□□□ -0.62
DDX49-201ENST00000247003 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 ITPR3Q14573 2671 aa11.16□□□□□ -0.62
DDX49-201ENST00000247003 ZNF469Q96JG9 3925 aaPredicted RBP11.15□□□□□ -0.62
DDX49-201ENST00000247003 AKAP9Q99996 3911 aa11.15□□□□□ -0.62
DDX49-201ENST00000247003 TRBV6-5A0A0K0K1A5 114 aa11.15□□□□□ -0.62
DDX49-201ENST00000247003 SDHAF1A6NFY7 115 aa11.15□□□□□ -0.62
DDX49-201ENST00000247003 CD28P10747 220 aa11.15□□□□□ -0.62
DDX49-201ENST00000247003 ZNF415Q09FC8 603 aa11.15□□□□□ -0.62
DDX49-201ENST00000247003 FHL3Q13643 280 aa11.15□□□□□ -0.62
DDX49-201ENST00000247003 SETXQ7Z333 2677 aaKnown RBP11.15□□□□□ -0.62
DDX49-201ENST00000247003 POLR2KP53803 58 aaKnown RBP11.14□□□□□ -0.63
DDX49-201ENST00000247003 SEC11AP67812 179 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 HSD52Q0P140 79 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 NEGR1Q7Z3B1 354 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 GTSCR1Q86UQ5 136 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 PCP2Q8IVA1 136 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 INSP01308 110 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 CRYGDP07320 174 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
DDX49-201ENST00000247003 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
DDX49-201ENST00000247003 ZNF124Q15973 351 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 HIST2H2BDQ6DRA6 164 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 ZFP2Q6ZN57 461 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
DDX49-201ENST00000247003 RBMY1BA6NDE4 496 aaKnown RBP11.13□□□□□ -0.63
DDX49-201ENST00000247003 RBMY1EA6NEQ0 496 aaKnown RBP11.13□□□□□ -0.63
DDX49-201ENST00000247003 RBMY1DP0C7P1 496 aaKnown RBP11.13□□□□□ -0.63
DDX49-201ENST00000247003 NEXN-AS1Q8NBZ9 246 aa11.13□□□□□ -0.63
DDX49-201ENST00000247003 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
DDX49-201ENST00000247003 JMJD8Q96S16 334 aa11.13□□□□□ -0.63
DDX49-201ENST00000247003 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
DDX49-201ENST00000247003 AGRNO00468 2067 aa11.13□□□□□ -0.63
DDX49-201ENST00000247003 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
DDX49-201ENST00000247003 A6NDN8 102 aa11.12□□□□□ -0.63
DDX49-201ENST00000247003 M0QY20 66 aa11.12□□□□□ -0.63
DDX49-201ENST00000247003 CITED2Q99967 270 aaPredicted RBP11.12□□□□□ -0.63
DDX49-201ENST00000247003 STHQ8IWL8 128 aa11.12□□□□□ -0.63
DDX49-201ENST00000247003 LINC01006Q8NI28 216 aa11.12□□□□□ -0.63
DDX49-201ENST00000247003 IGKV2D-26A0A0A0MRZ7 120 aa11.11□□□□□ -0.63
DDX49-201ENST00000247003 A8MWV9 139 aa11.11□□□□□ -0.63
DDX49-201ENST00000247003 M0R2P5 195 aa11.11□□□□□ -0.63
DDX49-201ENST00000247003 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
DDX49-201ENST00000247003 LINC01587Q99440 93 aa11.11□□□□□ -0.63
DDX49-201ENST00000247003 OR11H12B2RN74 326 aa11.1□□□□□ -0.63
DDX49-201ENST00000247003 RIPPLY3P57055 190 aa11.1□□□□□ -0.63
DDX49-201ENST00000247003 RHOHQ15669 191 aa11.1□□□□□ -0.63
DDX49-201ENST00000247003 PIK3CD-AS1Q5SR53 167 aa11.1□□□□□ -0.63
DDX49-201ENST00000247003 CLUHP3Q96NS8 147 aa11.1□□□□□ -0.63
DDX49-201ENST00000247003 LINC00467Q9BRT7 94 aa11.1□□□□□ -0.63
DDX49-201ENST00000247003 NPSP0C0P6 89 aa11.09□□□□□ -0.63
DDX49-201ENST00000247003 TIMM17AQ99595 171 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms