RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 SH2D6Q7Z4S9 175 aa13.24□□□□□ -0.29
SLC1A4-201ENST00000234256 ATP6V0BQ99437 205 aa13.24□□□□□ -0.29
SLC1A4-201ENST00000234256 LAMTOR3Q9UHA4 124 aa13.24□□□□□ -0.29
SLC1A4-201ENST00000234256 TRBV12-3P01733 135 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 LENEPQ9Y5L5 61 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 WI2-2373I1.2A0A1W2PRP0 233 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 INS-IGF2F8WCM5 200 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 PRO3102Q9H379 93 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 RPL39P62891 51 aaKnown RBP13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 ACANP16112 2415 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 A0A0J9YXV3 536 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 FXYD2P54710 66 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 C5orf56Q8N8D9 126 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 PRUNE2Q8WUY3 3088 aa13.23□□□□□ -0.29
SLC1A4-201ENST00000234256 F5H768 121 aa13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 ZNF80P51504 273 aaPredicted RBP13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 GAGE2AQ6NT46 116 aa13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 TRBV20-1A0A075B6N2 111 aa13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 RBAKDNA6NC62 111 aa13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 DAZAP2Q15038 168 aaPredicted RBP13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 CLPSL2Q6UWE3 100 aa13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 VPREB3Q9UKI3 123 aa13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 U3KQE9 123 aa13.22□□□□□ -0.29
SLC1A4-201ENST00000234256 C2orf70A6NJV1 201 aa13.21□□□□□ -0.29
SLC1A4-201ENST00000234256 EIF4EBP1Q13541 118 aaPredicted RBP13.21□□□□□ -0.29
SLC1A4-201ENST00000234256 SS18Q15532 418 aa13.21□□□□□ -0.29
SLC1A4-201ENST00000234256 RNASE8Q8TDE3 154 aaKnown RBP13.21□□□□□ -0.29
SLC1A4-201ENST00000234256 TMEM243Q9BU79 118 aa13.21□□□□□ -0.29
SLC1A4-201ENST00000234256 EPG5Q9HCE0 2579 aa13.21□□□□□ -0.29
SLC1A4-201ENST00000234256 C16orf54Q6UWD8 224 aa13.21□□□□□ -0.3
SLC1A4-201ENST00000234256 F8W1H4 67 aa13.2□□□□□ -0.3
SLC1A4-201ENST00000234256 SIVA1O15304 175 aa13.2□□□□□ -0.3
SLC1A4-201ENST00000234256 SUMO4Q6EEV6 95 aa13.2□□□□□ -0.3
SLC1A4-201ENST00000234256 TEX48A0A1B0GUV7 120 aa13.19□□□□□ -0.3
SLC1A4-201ENST00000234256 DEFB121Q5J5C9 76 aa13.19□□□□□ -0.3
SLC1A4-201ENST00000234256 NOP10Q9NPE3 64 aaKnown RBP13.19□□□□□ -0.3
SLC1A4-201ENST00000234256 SCRT2Q9NQ03 307 aa13.19□□□□□ -0.3
SLC1A4-201ENST00000234256 PPDPFLQ8WWR9 84 aa13.19□□□□□ -0.3
SLC1A4-201ENST00000234256 PTPRSQ13332 1948 aa13.19□□□□□ -0.3
SLC1A4-201ENST00000234256 TNRC6AQ8NDV7 1962 aaKnown RBP13.18□□□□□ -0.3
SLC1A4-201ENST00000234256 FOXI2Q6ZQN5 318 aa13.18□□□□□ -0.3
SLC1A4-201ENST00000234256 ZNF48Q96MX3 618 aaPredicted RBP13.18□□□□□ -0.3
SLC1A4-201ENST00000234256 UNC80Q8N2C7 3258 aa13.18□□□□□ -0.3
SLC1A4-201ENST00000234256 RNF114Q9Y508 228 aa13.18□□□□□ -0.3
SLC1A4-201ENST00000234256 LGALS1P09382 135 aaKnown RBP13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 Q8N1Y9 231 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 C10orf105Q8TEF2 133 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 GAGE12HA6NDE8 117 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 H3BUA1 57 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 J3QLI3 93 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 TAL2Q16559 108 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 NTN5Q8WTR8 489 aaPredicted RBP13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 ZFP2Q6ZN57 461 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 MLST8Q9BVC4 326 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 LINC00574Q9H8X3 128 aa13.17□□□□□ -0.3
SLC1A4-201ENST00000234256 A0A1B0GXF2 115 aa13.16□□□□□ -0.3
SLC1A4-201ENST00000234256 H3BMM0 161 aa13.16□□□□□ -0.3
SLC1A4-201ENST00000234256 TAX1BP3O14907 124 aa13.16□□□□□ -0.3
SLC1A4-201ENST00000234256 UBE2WQ96B02 151 aa13.16□□□□□ -0.3
SLC1A4-201ENST00000234256 YPEL4Q96NS1 127 aa13.16□□□□□ -0.3
SLC1A4-201ENST00000234256 DAD1P61803 113 aa13.16□□□□□ -0.3
SLC1A4-201ENST00000234256 SIRPDQ9H106 197 aa13.16□□□□□ -0.3
SLC1A4-201ENST00000234256 CTRLP40313 264 aa13.15□□□□□ -0.3
SLC1A4-201ENST00000234256 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
SLC1A4-201ENST00000234256 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
SLC1A4-201ENST00000234256 A0A087WW49 117 aa13.14□□□□□ -0.31
SLC1A4-201ENST00000234256 IGLL5B9A064 214 aa13.14□□□□□ -0.31
SLC1A4-201ENST00000234256 WFDC2Q14508 124 aa13.14□□□□□ -0.31
SLC1A4-201ENST00000234256 Q9H8V8 135 aa13.14□□□□□ -0.31
SLC1A4-201ENST00000234256 NUP210LQ5VU65 1888 aa13.14□□□□□ -0.31
SLC1A4-201ENST00000234256 CCL24O00175 119 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 CFC1BP0CG36 223 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 CFC1P0CG37 223 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 C5orf38Q86SI9 138 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 RS1O15537 224 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 MDFICQ9P1T7 246 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 A0A0J9YY99 117 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 LMO4P61968 165 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 ODF1Q14990 250 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 C9orf47Q6ZRZ4 202 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 SPAG8Q99932 426 aaPredicted RBP13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 A4D1N5 150 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 MBD6Q96DN6 1003 aa13.13□□□□□ -0.31
SLC1A4-201ENST00000234256 CCDC140Q96MF4 163 aa13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 FBXL19-AS1Q494R0 122 aa13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 CARD19Q96LW7 228 aa13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 OPRPNQ99935 248 aaPredicted RBP13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 HTTP42858 3142 aa13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 ANGP03950 147 aaKnown RBP13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 IGF1P05019 195 aa13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 XCL1P47992 114 aa13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 DAND5Q8N907 189 aa13.12□□□□□ -0.31
SLC1A4-201ENST00000234256 GHRHP01286 108 aa13.11□□□□□ -0.31
SLC1A4-201ENST00000234256 RHOHQ15669 191 aa13.11□□□□□ -0.31
SLC1A4-201ENST00000234256 BOD1L2Q8IYS8 172 aa13.11□□□□□ -0.31
SLC1A4-201ENST00000234256 ESM1Q9NQ30 184 aa13.11□□□□□ -0.31
SLC1A4-201ENST00000234256 IGHG2P01859 326 aa13.1□□□□□ -0.31
SLC1A4-201ENST00000234256 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms