RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 DYNC2H1Q8NCM8 4307 aaKnown RBP10.59□□□□□ -0.71
RPA3-201ENST00000223129 FABP4P15090 132 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 PDZD11Q5EBL8 140 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
RPA3-201ENST00000223129 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 SSBP4Q9BWG4 385 aaPredicted RBP10.58□□□□□ -0.72
RPA3-201ENST00000223129 OSTCQ9NRP0 149 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 XKRY2A2RUG3 117 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 F5H768 121 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 C3orf84H3BNL1 204 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 M0R381 172 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 IGLC6P0CF74 106 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 CASC10Q5T4H9 136 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 CDPF1Q6NVV7 123 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 OR10AG1Q8NH19 301 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 C18orf15Q96N68 181 aa10.58□□□□□ -0.72
RPA3-201ENST00000223129 PLECQ15149 4684 aaKnown RBP10.58□□□□□ -0.72
RPA3-201ENST00000223129 SNAI2O43623 268 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 MED14OSP0DP75 135 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 FER1L6-AS1Q8NA97 138 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 PTH2Q96A98 100 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 ZNF479Q96JC4 524 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 PACRGQ96M98 296 aaPredicted RBP10.57□□□□□ -0.72
RPA3-201ENST00000223129 HIST1H2BLQ99880 126 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 JPT2Q9H910 190 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 OR5AL1P0C617 328 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 COA6Q5JTJ3 125 aaKnown RBP10.57□□□□□ -0.72
RPA3-201ENST00000223129 OR10G8Q8NGN5 311 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 GTSF1Q8WW33 167 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 V9GYV3 84 aa10.57□□□□□ -0.72
RPA3-201ENST00000223129 NUPR2A6NF83 97 aa10.56□□□□□ -0.72
RPA3-201ENST00000223129 IGLL5B9A064 214 aa10.56□□□□□ -0.72
RPA3-201ENST00000223129 PKIAP61925 76 aa10.56□□□□□ -0.72
RPA3-201ENST00000223129 LYZL1Q6UWQ5 148 aa10.56□□□□□ -0.72
RPA3-201ENST00000223129 OR4C5Q8NGB2 326 aa10.56□□□□□ -0.72
RPA3-201ENST00000223129 FAM3BP58499 235 aaPredicted RBP10.55□□□□□ -0.72
RPA3-201ENST00000223129 CFAP126Q5VTH2 177 aa10.55□□□□□ -0.72
RPA3-201ENST00000223129 SYT8Q8NBV8 401 aa10.55□□□□□ -0.72
RPA3-201ENST00000223129 NACAE9PAV3 2078 aa10.55□□□□□ -0.72
RPA3-201ENST00000223129 IGHV3-73A0A0B4J1V6 119 aa10.55□□□□□ -0.72
RPA3-201ENST00000223129 TRAV4A0A0B4J268 109 aa10.55□□□□□ -0.72
RPA3-201ENST00000223129 A8MWL6 223 aa10.55□□□□□ -0.72
RPA3-201ENST00000223129 SPANXN1Q5VSR9 72 aa10.55□□□□□ -0.72
RPA3-201ENST00000223129 TSTD3H0UI37 97 aa10.54□□□□□ -0.72
RPA3-201ENST00000223129 RS1O15537 224 aa10.54□□□□□ -0.72
RPA3-201ENST00000223129 FHL2Q14192 279 aa10.54□□□□□ -0.72
RPA3-201ENST00000223129 JOSD1Q15040 202 aaPredicted RBP10.54□□□□□ -0.72
RPA3-201ENST00000223129 CT83Q5H943 113 aa10.54□□□□□ -0.72
RPA3-201ENST00000223129 SAMD10Q9BYL1 202 aa10.54□□□□□ -0.72
RPA3-201ENST00000223129 KLK5Q9Y337 293 aaPredicted RBP10.54□□□□□ -0.72
RPA3-201ENST00000223129 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 A0A0J9YY99 117 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 F2Z2F3 143 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 PIK3CD-AS1Q5SR53 167 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 KCNIP4Q6PIL6 250 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 NDUFAF3Q9BU61 184 aa10.53□□□□□ -0.72
RPA3-201ENST00000223129 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.73
RPA3-201ENST00000223129 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
RPA3-201ENST00000223129 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
RPA3-201ENST00000223129 A8MWV9 139 aa10.52□□□□□ -0.73
RPA3-201ENST00000223129 NXPH4O95158 308 aa10.52□□□□□ -0.73
RPA3-201ENST00000223129 C14orf144Q96I85 54 aa10.52□□□□□ -0.73
RPA3-201ENST00000223129 A0A087WWL8 130 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 NTF3P20783 257 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 DDTP30046 118 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 CTRLP40313 264 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 TENM2Q9NT68 2774 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 HIGD1CA8MV81 97 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 FOXA3P55318 350 aaPredicted RBP10.51□□□□□ -0.73
RPA3-201ENST00000223129 FAM74A4Q5TZK3 123 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 IMMP2LQ96T52 175 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 HHLA3Q9XRX5 114 aa10.51□□□□□ -0.73
RPA3-201ENST00000223129 CRYGDP07320 174 aa10.5□□□□□ -0.73
RPA3-201ENST00000223129 CACNG7P62955 275 aa10.5□□□□□ -0.73
RPA3-201ENST00000223129 VSIG2Q96IQ7 327 aa10.5□□□□□ -0.73
RPA3-201ENST00000223129 GFRA4Q9GZZ7 299 aa10.5□□□□□ -0.73
RPA3-201ENST00000223129 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
RPA3-201ENST00000223129 Q6ZSN1 163 aa10.5□□□□□ -0.73
RPA3-201ENST00000223129 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
RPA3-201ENST00000223129 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
RPA3-201ENST00000223129 LYSTQ99698 3801 aa10.49□□□□□ -0.73
RPA3-201ENST00000223129 CRYBA4P53673 196 aa10.49□□□□□ -0.73
RPA3-201ENST00000223129 TWIST1Q15672 202 aa10.49□□□□□ -0.73
RPA3-201ENST00000223129 NUP35Q8NFH5 326 aa10.49□□□□□ -0.73
RPA3-201ENST00000223129 PRO0255Q9UI72 69 aa10.49□□□□□ -0.73
RPA3-201ENST00000223129 SMIM27A0A1W2PRY6 76 aa10.48□□□□□ -0.73
RPA3-201ENST00000223129 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
RPA3-201ENST00000223129 TMEM18Q96B42 140 aa10.48□□□□□ -0.73
RPA3-201ENST00000223129 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
RPA3-201ENST00000223129 PRO1933Q9H354 126 aa10.48□□□□□ -0.73
RPA3-201ENST00000223129 PAX4O43316 350 aa10.48□□□□□ -0.73
RPA3-201ENST00000223129 GATA1P15976 413 aaPredicted RBP10.48□□□□□ -0.73
RPA3-201ENST00000223129 WDR73Q6P4I2 378 aa10.48□□□□□ -0.73
RPA3-201ENST00000223129 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
RPA3-201ENST00000223129 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms