RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 VPS13CQ709C8 3753 aa12.69□□□□□ -0.38
CTDP1-201ENST00000075430 ANAPC13Q9BS18 74 aa12.69□□□□□ -0.38
CTDP1-201ENST00000075430 ZANQ9Y493 2812 aa12.69□□□□□ -0.38
CTDP1-201ENST00000075430 A8MWV9 139 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 TSPEAR-AS2P59090 65 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 KLK9Q9UKQ9 250 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 TRAV21A0A0B4J279 112 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 HERVK_113P61574 105 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 CNFNQ9BYD5 112 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 FN1P02751 2386 aaKnown RBP12.68□□□□□ -0.38
CTDP1-201ENST00000075430 NAV2Q8IVL1 2488 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 FAM159AQ6UWV7 190 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 ANKRD29Q8N6D5 301 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 MRAP2Q96G30 205 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 DUX5Q96PT3 197 aa12.68□□□□□ -0.38
CTDP1-201ENST00000075430 GNLYP22749 145 aa12.67□□□□□ -0.38
CTDP1-201ENST00000075430 B5MCH6 92 aa12.67□□□□□ -0.38
CTDP1-201ENST00000075430 ZNF688P0C7X2 276 aa12.67□□□□□ -0.38
CTDP1-201ENST00000075430 SPXQ9BT56 116 aa12.67□□□□□ -0.38
CTDP1-201ENST00000075430 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
CTDP1-201ENST00000075430 PRM2P04554 102 aa12.67□□□□□ -0.38
CTDP1-201ENST00000075430 CFAP126Q5VTH2 177 aa12.67□□□□□ -0.38
CTDP1-201ENST00000075430 FAM110DQ8TAY7 271 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-201ENST00000075430 SPATA25Q9BR10 227 aa12.67□□□□□ -0.38
CTDP1-201ENST00000075430 SDHAF1A6NFY7 115 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 Q6ZUT4 128 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 TOMM6Q96B49 74 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 A4D1N5 150 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 LY6G5BQ8NDX9 201 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 CARD19Q96LW7 228 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 CDIP1Q9H305 208 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 TMEM95Q3KNT9 176 aa12.66□□□□□ -0.38
CTDP1-201ENST00000075430 CEMP1Q6PRD7 247 aaPredicted RBP12.66□□□□□ -0.38
CTDP1-201ENST00000075430 TAL2Q16559 108 aa12.65□□□□□ -0.38
CTDP1-201ENST00000075430 UCNP55089 124 aa12.65□□□□□ -0.38
CTDP1-201ENST00000075430 NDUFA11Q86Y39 141 aa12.65□□□□□ -0.38
CTDP1-201ENST00000075430 ODF3BA8MYP8 253 aa12.65□□□□□ -0.39
CTDP1-201ENST00000075430 PRRC2AP48634 2157 aaKnown RBP12.64□□□□□ -0.39
CTDP1-201ENST00000075430 TRAV41A0A0B4J266 112 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 M0R1W7 72 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 CFC1BP0CG36 223 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 CFC1P0CG37 223 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 ZFAND2AQ8N6M9 145 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 NTN5Q8WTR8 489 aaPredicted RBP12.64□□□□□ -0.39
CTDP1-201ENST00000075430 CELSR2Q9HCU4 2923 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 PRSS47A8MTI9 375 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 A8MZ25 164 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 Q6ZSV7 163 aa12.64□□□□□ -0.39
CTDP1-201ENST00000075430 RHPN1-AS1Q9BWJ2 59 aa12.63□□□□□ -0.39
CTDP1-201ENST00000075430 FLNCQ14315 2725 aa12.63□□□□□ -0.39
CTDP1-201ENST00000075430 A0A0J9YY99 117 aa12.63□□□□□ -0.39
CTDP1-201ENST00000075430 BLCAPP62952 87 aa12.63□□□□□ -0.39
CTDP1-201ENST00000075430 PIFOQ8TCI5 191 aa12.63□□□□□ -0.39
CTDP1-201ENST00000075430 A0A0J9YXV3 536 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 RBAKDNA6NC62 111 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 J3QQQ9 107 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 CRYGDP07320 174 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 HIST2H2BDQ6DRA6 164 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 SUMO4Q6EEV6 95 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 DAND5Q8N907 189 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 C19orf84I3L1E1 186 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 SLC25A20O43772 301 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 TEX29Q8N6K0 151 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 ZNRF2Q8NHG8 242 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 PPDPFLQ8WWR9 84 aa12.62□□□□□ -0.39
CTDP1-201ENST00000075430 NOTCH2Q04721 2471 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 C9orf47Q6ZRZ4 202 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 ZNF625Q96I27 306 aaPredicted RBP12.61□□□□□ -0.39
CTDP1-201ENST00000075430 MDFICQ9P1T7 246 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 EPG5Q9HCE0 2579 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 TSHBP01222 138 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 P0DMU3 169 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 FAM231AP0DMU4 169 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 FAM231CP0DMU5 169 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 RNASE3P12724 160 aaKnown RBP12.61□□□□□ -0.39
CTDP1-201ENST00000075430 PMVKQ15126 192 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 PSMG4Q5JS54 123 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 PRO1854Q9UHT4 67 aa12.61□□□□□ -0.39
CTDP1-201ENST00000075430 SPINK13Q1W4C9 94 aa12.6□□□□□ -0.39
CTDP1-201ENST00000075430 TEN1Q86WV5 123 aa12.6□□□□□ -0.39
CTDP1-201ENST00000075430 MUSTN1Q8IVN3 82 aa12.6□□□□□ -0.39
CTDP1-201ENST00000075430 UTP20O75691 2785 aaKnown RBP12.6□□□□□ -0.39
CTDP1-201ENST00000075430 TRAV8-3A0A0A6YYJ7 113 aa12.6□□□□□ -0.39
CTDP1-201ENST00000075430 COX8CQ7Z4L0 72 aa12.6□□□□□ -0.39
CTDP1-201ENST00000075430 MAPK1IP1LQ8NDC0 245 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 ERG28Q9UKR5 140 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 TRAV12-1A0A0B4J245 112 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 CENPVL3A0A0U1RRI6 287 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 ELANEP08246 267 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 C9orf139Q6ZV77 190 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 TEX49A0A1B0GTD5 131 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 ZNF876PQ49A33 203 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 Q8N6K4 173 aa12.59□□□□□ -0.39
CTDP1-201ENST00000075430 ZFAND6Q6FIF0 208 aa12.58□□□□□ -0.4
CTDP1-201ENST00000075430 NRGNQ92686 78 aa12.58□□□□□ -0.4
CTDP1-201ENST00000075430 ZNF48Q96MX3 618 aaPredicted RBP12.58□□□□□ -0.4
CTDP1-201ENST00000075430 NPFFO15130 113 aa12.58□□□□□ -0.4
CTDP1-201ENST00000075430 C10orf126Q8N4M7 172 aa12.58□□□□□ -0.4
CTDP1-201ENST00000075430 ZNF462Q96JM2 2506 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms