RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 PRSS47A8MTI9 375 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 LGALS9O00182 355 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 MED14OSP0DP75 135 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 COX8AP10176 69 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 SLURP1P55000 103 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 RNF152Q8N8N0 203 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 RASL10AQ92737 203 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 DPH3P1Q9H4G8 78 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 APCP25054 2843 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 A0A0J9YX75 114 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 ADAMTSL5Q6ZMM2 481 aa12.66□□□□□ -0.38
PHGDH-229ENST00000641891 SNRPD3P62318 126 aaKnown RBP12.65□□□□□ -0.38
PHGDH-229ENST00000641891 LAGE3Q14657 143 aa12.65□□□□□ -0.38
PHGDH-229ENST00000641891 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.38
PHGDH-229ENST00000641891 DEFB125Q8N687 156 aa12.65□□□□□ -0.38
PHGDH-229ENST00000641891 WFDC11Q8NEX6 87 aa12.65□□□□□ -0.38
PHGDH-229ENST00000641891 SMIM17P0DL12 118 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 MUC4Q99102 2169 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 C7orf71A4D174 169 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 NUDT3O95989 172 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 C2orf91Q6ZV80 131 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 Q8N2B8 174 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 DPF1Q92782 380 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 SMIM2Q9BVW6 85 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 JPT2Q9H910 190 aa12.64□□□□□ -0.39
PHGDH-229ENST00000641891 PRSS1P07477 247 aa12.63□□□□□ -0.39
PHGDH-229ENST00000641891 CD7P09564 240 aa12.63□□□□□ -0.39
PHGDH-229ENST00000641891 FGF6P10767 208 aa12.63□□□□□ -0.39
PHGDH-229ENST00000641891 ODF1Q14990 250 aa12.63□□□□□ -0.39
PHGDH-229ENST00000641891 TCTEX1D4Q5JR98 221 aa12.63□□□□□ -0.39
PHGDH-229ENST00000641891 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
PHGDH-229ENST00000641891 DLEU1O43261 78 aa12.63□□□□□ -0.39
PHGDH-229ENST00000641891 FOXC2Q99958 501 aa12.63□□□□□ -0.39
PHGDH-229ENST00000641891 NXPH4O95158 308 aa12.62□□□□□ -0.39
PHGDH-229ENST00000641891 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
PHGDH-229ENST00000641891 NPSP0C0P6 89 aa12.62□□□□□ -0.39
PHGDH-229ENST00000641891 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
PHGDH-229ENST00000641891 BVES-AS1Q5T3Y7 98 aa12.62□□□□□ -0.39
PHGDH-229ENST00000641891 AGRNO00468 2067 aa12.61□□□□□ -0.39
PHGDH-229ENST00000641891 CREBBPQ92793 2442 aa12.61□□□□□ -0.39
PHGDH-229ENST00000641891 KHDC1LQ5JSQ8 128 aa12.61□□□□□ -0.39
PHGDH-229ENST00000641891 OR1N2Q8NGR9 330 aa12.6□□□□□ -0.39
PHGDH-229ENST00000641891 ODF3Q96PU9 254 aa12.6□□□□□ -0.39
PHGDH-229ENST00000641891 KIF25-AS1Q9Y6Z4 181 aa12.6□□□□□ -0.39
PHGDH-229ENST00000641891 LINC00315P59091 139 aa12.6□□□□□ -0.39
PHGDH-229ENST00000641891 MDFICQ9P1T7 246 aa12.6□□□□□ -0.39
PHGDH-229ENST00000641891 TENM4Q6N022 2769 aa12.59□□□□□ -0.39
PHGDH-229ENST00000641891 A0A087WWL8 130 aa12.59□□□□□ -0.39
PHGDH-229ENST00000641891 NMUP48645 174 aa12.59□□□□□ -0.39
PHGDH-229ENST00000641891 OR11H1Q8NG94 326 aa12.59□□□□□ -0.39
PHGDH-229ENST00000641891 ZMAT4Q9H898 229 aa12.59□□□□□ -0.39
PHGDH-229ENST00000641891 CDKN1BP46527 198 aa12.59□□□□□ -0.39
PHGDH-229ENST00000641891 NEGR1Q7Z3B1 354 aa12.59□□□□□ -0.39
PHGDH-229ENST00000641891 PCP2Q8IVA1 136 aa12.59□□□□□ -0.39
PHGDH-229ENST00000641891 IGHV3-16A0A0C4DH30 117 aa12.58□□□□□ -0.4
PHGDH-229ENST00000641891 KNCNA6PVL3 124 aa12.58□□□□□ -0.4
PHGDH-229ENST00000641891 LINC01619G3V211 115 aa12.58□□□□□ -0.4
PHGDH-229ENST00000641891 ATP5LO75964 103 aa12.58□□□□□ -0.4
PHGDH-229ENST00000641891 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
PHGDH-229ENST00000641891 AMTNQ6UX39 209 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 BOD1L2Q8IYS8 172 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 Q8N1Y9 231 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 HHLA3Q9XRX5 114 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 IGKV2D-26A0A0A0MRZ7 120 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 IGKCP01834 107 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 GAGE1Q13065 139 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 ZNF124Q15973 351 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 FOXI2Q6ZQN5 318 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 DEFB104AQ8WTQ1 72 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 COX11Q9Y6N1 276 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 ITPR3Q14573 2671 aa12.57□□□□□ -0.4
PHGDH-229ENST00000641891 SUMO4Q6EEV6 95 aa12.56□□□□□ -0.4
PHGDH-229ENST00000641891 C12orf54Q6X4T0 127 aa12.56□□□□□ -0.4
PHGDH-229ENST00000641891 C4orf3Q8WVX3 66 aa12.56□□□□□ -0.4
PHGDH-229ENST00000641891 MRPL35Q9NZE8 188 aaKnown RBP12.56□□□□□ -0.4
PHGDH-229ENST00000641891 DNAJC9-AS1A6NH13 148 aa12.56□□□□□ -0.4
PHGDH-229ENST00000641891 DUSP14O95147 198 aaKnown RBP12.56□□□□□ -0.4
PHGDH-229ENST00000641891 Q6ZSV7 163 aa12.56□□□□□ -0.4
PHGDH-229ENST00000641891 ERASQ7Z444 233 aa12.56□□□□□ -0.4
PHGDH-229ENST00000641891 KLHL30-AS1Q8NEE0 82 aa12.56□□□□□ -0.4
PHGDH-229ENST00000641891 CSTL1Q9H114 145 aa12.56□□□□□ -0.4
PHGDH-229ENST00000641891 CUBNO60494 3623 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 IGHV1OR15-1A0A075B7D0 117 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 DPM2O94777 84 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 DEFB131AP59861 70 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 ORMDL2Q53FV1 153 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 OR9G4Q8NGQ1 327 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 DLX4Q92988 240 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-229ENST00000641891 TTTY13Q9BZ97 58 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 TMEM160Q9NX00 188 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 AKAP9Q99996 3911 aa12.55□□□□□ -0.4
PHGDH-229ENST00000641891 RBMY1A1P0DJD3 496 aaKnown RBP12.54□□□□□ -0.4
PHGDH-229ENST00000641891 RBMY1CP0DJD4 496 aa12.54□□□□□ -0.4
PHGDH-229ENST00000641891 RBMY1FQ15415 496 aaKnown RBP12.54□□□□□ -0.4
PHGDH-229ENST00000641891 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
PHGDH-229ENST00000641891 TMEM61Q8N0U2 210 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1619.7 ms