RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 FAM236BA0A1B0GV22 79 aa13□□□□□ -0.33
CACNA1A-258ENST00000638029 NDUFB8O95169 186 aa13□□□□□ -0.33
CACNA1A-258ENST00000638029 NREPQ16612 68 aa13□□□□□ -0.33
CACNA1A-258ENST00000638029 Q9H8V8 135 aa13□□□□□ -0.33
CACNA1A-258ENST00000638029 DAND5Q8N907 189 aa12.99□□□□□ -0.33
CACNA1A-258ENST00000638029 J3KT08 172 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 PFN1P07737 140 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 ZNF134P52741 427 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 MRPL51Q4U2R6 128 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 FGF16O43320 207 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 HERVK_113P63121 156 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 HIST2H2BCQ6DN03 193 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 SH2D6Q7Z4S9 175 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 RHOHQ15669 191 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 GFI1Q99684 422 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 MRPL55Q7Z7F7 128 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 IGKV1-6A0A0C4DH72 117 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 IGKV1D-17A0A075B6S4 117 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 CCL25O15444 150 aa12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 NTN5Q8WTR8 489 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-258ENST00000638029 DEFB113Q30KQ7 82 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 Q86TA4 180 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 Q6P435 159 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 LYPD6Q86Y78 171 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 ZNF581Q9P0T4 197 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 HLA-DMBP28068 263 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 CSRP3P50461 194 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 FNDC10F2Z333 226 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 PDE6HQ13956 83 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 DYNAPQ8N1N2 210 aa12.97□□□□□ -0.33
CACNA1A-258ENST00000638029 PSMB8P28062 276 aa12.96□□□□□ -0.33
CACNA1A-258ENST00000638029 SPANXDQ9BXN6 97 aa12.96□□□□□ -0.33
CACNA1A-258ENST00000638029 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-258ENST00000638029 COX8AP10176 69 aa12.96□□□□□ -0.33
CACNA1A-258ENST00000638029 TMEM75Q8N9X5 138 aa12.96□□□□□ -0.33
CACNA1A-258ENST00000638029 ZC2HC1AQ96GY0 325 aa12.96□□□□□ -0.33
CACNA1A-258ENST00000638029 Q6ZVH6 145 aa12.95□□□□□ -0.34
CACNA1A-258ENST00000638029 IGHV4-30-2A0A087WSY4 118 aa12.95□□□□□ -0.34
CACNA1A-258ENST00000638029 COX7A2LO14548 114 aa12.95□□□□□ -0.34
CACNA1A-258ENST00000638029 B9D2Q9BPU9 175 aa12.95□□□□□ -0.34
CACNA1A-258ENST00000638029 IGLV2-18A0A075B6J9 118 aa12.94□□□□□ -0.34
CACNA1A-258ENST00000638029 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-258ENST00000638029 K7ERS5 55 aa12.94□□□□□ -0.34
CACNA1A-258ENST00000638029 PNRC2Q9NPJ4 139 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-258ENST00000638029 HIGD2BQ4VC39 106 aa12.94□□□□□ -0.34
CACNA1A-258ENST00000638029 LYPD3O95274 346 aa12.94□□□□□ -0.34
CACNA1A-258ENST00000638029 LY6G6CO95867 125 aa12.94□□□□□ -0.34
CACNA1A-258ENST00000638029 HHLA3Q9XRX5 114 aa12.94□□□□□ -0.34
CACNA1A-258ENST00000638029 Q6ZWC4 215 aa12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 J3QLI3 93 aa12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 C12orf74Q32Q52 190 aa12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 PTPN13Q12923 2485 aa12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 MRPL35Q9NZE8 188 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 A0A087WZ39 114 aa12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 TRAV1-1A0A0B4J248 108 aa12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 TMEM14EPQ6UXP3 125 aa12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 RNF144BQ7Z419 303 aa12.93□□□□□ -0.34
CACNA1A-258ENST00000638029 IGLL1P15814 213 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 CYYR1Q96J86 154 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 C15orf62A8K5M9 175 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 RAI1Q7Z5J4 1906 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 WISP1O95388 367 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 SPANXCQ9NY87 97 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 SRSF2Q01130 221 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 Q6ZS92 163 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 SONP18583 2426 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 NDUFS7O75251 213 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 FAM231DQ6ZW35 169 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 C3orf22Q8N5N4 141 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
CACNA1A-258ENST00000638029 VPREB3Q9UKI3 123 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 KLK12Q9UKR0 248 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 Q8NFD4 153 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 C18orf32Q8TCD1 76 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 CYTL1Q9NRR1 136 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 WFDC10BQ8IUB3 73 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 Q8N8P6 123 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 FAM110AQ9BQ89 295 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 SMAD5-AS1Q9Y6J3 95 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 UBE2D3P61077 147 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 HERV-K104P63124 156 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 LHFPL1Q86WI0 220 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 LTBP1Q14766 1721 aa12.91□□□□□ -0.34
CACNA1A-258ENST00000638029 SLC25A29Q8N8R3 303 aa12.9□□□□□ -0.34
CACNA1A-258ENST00000638029 GFRA4Q9GZZ7 299 aa12.9□□□□□ -0.34
CACNA1A-258ENST00000638029 J3QQQ9 107 aa12.9□□□□□ -0.34
CACNA1A-258ENST00000638029 IGHV2-70P01814 119 aa12.9□□□□□ -0.34
CACNA1A-258ENST00000638029 C5orf63A6NC05 138 aa12.9□□□□□ -0.34
CACNA1A-258ENST00000638029 TMEM61Q8N0U2 210 aa12.9□□□□□ -0.34
CACNA1A-258ENST00000638029 NUP210LQ5VU65 1888 aa12.9□□□□□ -0.34
CACNA1A-258ENST00000638029 LTAP01374 205 aa12.9□□□□□ -0.35
CACNA1A-258ENST00000638029 DKK2Q9UBU2 259 aa12.9□□□□□ -0.35
CACNA1A-258ENST00000638029 ATP6V0E2Q8NHE4 81 aa12.89□□□□□ -0.35
CACNA1A-258ENST00000638029 PRR20EP86478 221 aa12.89□□□□□ -0.35
CACNA1A-258ENST00000638029 PRR20CP86479 221 aa12.89□□□□□ -0.35
CACNA1A-258ENST00000638029 PRR20DP86480 221 aa12.89□□□□□ -0.35
CACNA1A-258ENST00000638029 PRR20BP86481 221 aa12.89□□□□□ -0.35
CACNA1A-258ENST00000638029 PRR20AP86496 221 aa12.89□□□□□ -0.35
CACNA1A-258ENST00000638029 PRSS33Q8NF86 280 aa12.89□□□□□ -0.35
CACNA1A-258ENST00000638029 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms