RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 DNAH10OSP0CZ25 163 aa12.9□□□□□ -0.34
CLN6-221ENST00000637494 Q6ZRN7 208 aaPredicted RBP12.9□□□□□ -0.34
CLN6-221ENST00000637494 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
CLN6-221ENST00000637494 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
CLN6-221ENST00000637494 CYTL1Q9NRR1 136 aa12.9□□□□□ -0.34
CLN6-221ENST00000637494 ZFP30Q9Y2G7 519 aa12.9□□□□□ -0.34
CLN6-221ENST00000637494 DNAH11Q96DT5 4516 aa12.9□□□□□ -0.34
CLN6-221ENST00000637494 IGHV3-73A0A0B4J1V6 119 aa12.89□□□□□ -0.35
CLN6-221ENST00000637494 A8MWV9 139 aa12.89□□□□□ -0.35
CLN6-221ENST00000637494 B4DEV8 164 aa12.89□□□□□ -0.35
CLN6-221ENST00000637494 CRYGDP07320 174 aa12.89□□□□□ -0.35
CLN6-221ENST00000637494 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
CLN6-221ENST00000637494 ZNF345Q14585 488 aa12.89□□□□□ -0.35
CLN6-221ENST00000637494 LGALSLQ3ZCW2 172 aaPredicted RBP12.89□□□□□ -0.35
CLN6-221ENST00000637494 CST9LP1Q5W188 147 aa12.89□□□□□ -0.35
CLN6-221ENST00000637494 PGPEP1Q9NXJ5 209 aa12.89□□□□□ -0.35
CLN6-221ENST00000637494 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 FHITP49789 147 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 OR10J3Q5JRS4 329 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 PIK3CD-AS1Q5SR53 167 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 DPPA3Q6W0C5 159 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 KCNRGQ8N5I3 272 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 SYT8Q8NBV8 401 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 TNFRSF18Q9Y5U5 241 aa12.88□□□□□ -0.35
CLN6-221ENST00000637494 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
CLN6-221ENST00000637494 DYNC1H1Q14204 4646 aaKnown RBP12.87□□□□□ -0.35
CLN6-221ENST00000637494 A0A0D9SG52 128 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 KANTRA0A1W2PQU2 76 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 UMAD1C9J7I0 102 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 SEC11BP0C7V7 166 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 AKR1C3P42330 323 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 EIF5AP63241 154 aaKnown RBP12.86□□□□□ -0.35
CLN6-221ENST00000637494 FAM162BQ5T6X4 162 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 ZFP2Q6ZN57 461 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 MAPKAPK5-AS1Q8N8E1 139 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 IL36BQ9NZH7 164 aa12.86□□□□□ -0.35
CLN6-221ENST00000637494 HMSDA8MTL9 139 aa12.85□□□□□ -0.35
CLN6-221ENST00000637494 CDPF1Q6NVV7 123 aa12.85□□□□□ -0.35
CLN6-221ENST00000637494 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
CLN6-221ENST00000637494 ZC2HC1AQ96GY0 325 aa12.85□□□□□ -0.35
CLN6-221ENST00000637494 ZNF471Q9BX82 626 aaPredicted RBP12.85□□□□□ -0.35
CLN6-221ENST00000637494 PARLQ9H300 379 aa12.85□□□□□ -0.35
CLN6-221ENST00000637494 M0R036 132 aa12.84□□□□□ -0.35
CLN6-221ENST00000637494 PSCAO43653 123 aa12.84□□□□□ -0.35
CLN6-221ENST00000637494 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
CLN6-221ENST00000637494 LELP1Q5T871 98 aa12.84□□□□□ -0.35
CLN6-221ENST00000637494 OR11H4Q8NGC9 324 aa12.84□□□□□ -0.35
CLN6-221ENST00000637494 FAM213BQ8TBF2 198 aa12.84□□□□□ -0.35
CLN6-221ENST00000637494 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
CLN6-221ENST00000637494 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
CLN6-221ENST00000637494 KRBOX1C9JBD0 128 aa12.83□□□□□ -0.36
CLN6-221ENST00000637494 H3BVH4 76 aa12.83□□□□□ -0.36
CLN6-221ENST00000637494 RHODO00212 210 aa12.83□□□□□ -0.36
CLN6-221ENST00000637494 SH2D1AO60880 128 aa12.83□□□□□ -0.36
CLN6-221ENST00000637494 PFDN1O60925 122 aa12.83□□□□□ -0.36
CLN6-221ENST00000637494 S100A9P06702 114 aaKnown RBP12.83□□□□□ -0.36
CLN6-221ENST00000637494 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.36
CLN6-221ENST00000637494 BCL2L11O43521 198 aa12.82□□□□□ -0.36
CLN6-221ENST00000637494 PAGE4O60829 102 aa12.82□□□□□ -0.36
CLN6-221ENST00000637494 ARMS2P0C7Q2 107 aa12.82□□□□□ -0.36
CLN6-221ENST00000637494 TPT1P13693 172 aaKnown RBP12.82□□□□□ -0.36
CLN6-221ENST00000637494 DNLZQ5SXM8 178 aa12.82□□□□□ -0.36
CLN6-221ENST00000637494 PHLDA3Q9Y5J5 127 aa12.82□□□□□ -0.36
CLN6-221ENST00000637494 A0A087WTM6 91 aa12.81□□□□□ -0.36
CLN6-221ENST00000637494 GRIFINA4D1Z8 144 aa12.81□□□□□ -0.36
CLN6-221ENST00000637494 LTAP01374 205 aa12.81□□□□□ -0.36
CLN6-221ENST00000637494 CRIP1P50238 77 aa12.81□□□□□ -0.36
CLN6-221ENST00000637494 ZNF674Q2M3X9 581 aa12.81□□□□□ -0.36
CLN6-221ENST00000637494 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
CLN6-221ENST00000637494 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
CLN6-221ENST00000637494 GAGE1Q13065 139 aa12.8□□□□□ -0.36
CLN6-221ENST00000637494 GAGE4Q13068 117 aa12.8□□□□□ -0.36
CLN6-221ENST00000637494 GAGE5Q13069 117 aa12.8□□□□□ -0.36
CLN6-221ENST00000637494 LINC01559Q495D7 138 aa12.8□□□□□ -0.36
CLN6-221ENST00000637494 GAGE13Q4V321 117 aa12.8□□□□□ -0.36
CLN6-221ENST00000637494 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 A0A1B0GV50 99 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 IBA57-AS1B1ANH7 110 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 IGHV3-30P01768 117 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 IGHV3-33P01772 117 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 IGHV3-30-3P0DP02 117 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 IGHV3-30-5P0DP03 117 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 FAM74A4Q5TZK3 123 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 DMRTA1Q5VZB9 504 aa12.79□□□□□ -0.36
CLN6-221ENST00000637494 A0A087WWC5 75 aa12.78□□□□□ -0.36
CLN6-221ENST00000637494 ZFP82Q8N141 532 aa12.78□□□□□ -0.36
CLN6-221ENST00000637494 JPT2Q9H910 190 aa12.78□□□□□ -0.36
CLN6-221ENST00000637494 Q9HAA7 133 aa12.78□□□□□ -0.36
CLN6-221ENST00000637494 M0R381 172 aa12.77□□□□□ -0.37
CLN6-221ENST00000637494 Q6ZSN1 163 aa12.77□□□□□ -0.37
CLN6-221ENST00000637494 Q8N1X5 172 aa12.77□□□□□ -0.37
CLN6-221ENST00000637494 EIF5AL1Q6IS14 154 aaKnown RBP12.76□□□□□ -0.37
CLN6-221ENST00000637494 TMUB2Q71RG4 321 aa12.76□□□□□ -0.37
CLN6-221ENST00000637494 SFRP2Q96HF1 295 aa12.76□□□□□ -0.37
CLN6-221ENST00000637494 SAMD10Q9BYL1 202 aa12.76□□□□□ -0.37
CLN6-221ENST00000637494 SCO2A0A1W2PP80 73 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms