RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 APRG1Q8IVJ8 170 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 DIRC1Q969H9 104 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 DLEU1O43261 78 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 INSL3P51460 131 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 SLURP1P55000 103 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 PRR20EP86478 221 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 PRR20CP86479 221 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 PRR20DP86480 221 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 PRR20BP86481 221 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 PRR20AP86496 221 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 Q6ZS49 121 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 ATRXP46100 2492 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 PLXNA2O75051 1894 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 SIP14410 1827 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 RBAKDNA6NC62 111 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 LGALS9BQ3B8N2 356 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 LGALS9CQ6DKI2 356 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 LINC00311Q8N616 119 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 VWCEQ96DN2 955 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 MLANAQ16655 118 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 SND1-IT1Q9HBX3 110 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 PRSS57Q6UWY2 283 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 ZFP2Q6ZN57 461 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 C11orf45Q8TAV5 145 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 NCOR1P1Q9H4R4 102 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 TET2Q6N021 2002 aaPredicted RBP4.39□□□□□ -1.71
SCN1A-209ENST00000635750 LENEPQ9Y5L5 61 aa4.39□□□□□ -1.71
SCN1A-209ENST00000635750 HCFC1P51610 2035 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 PLXNB1O43157 2135 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 SPRY2O43597 315 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 LOXP28300 417 aaPredicted RBP4.38□□□□□ -1.71
SCN1A-209ENST00000635750 HILS1P60008 231 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 TMEM256-PLSCR3K7ERE1 68 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 LHFPL1Q86WI0 220 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 TRBV7-3A0A075B6L6 115 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 NCR3O14931 201 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 FLVCR1-AS1Q8TAF5 88 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 PNRC2Q9NPJ4 139 aaKnown RBP4.38□□□□□ -1.71
SCN1A-209ENST00000635750 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 TRBV12-3P01733 135 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 LY6G6FQ5SQ64 297 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 Q6ZVH6 145 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 NPBQ8NG41 125 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 MRPL35Q9NZE8 188 aaKnown RBP4.38□□□□□ -1.71
SCN1A-209ENST00000635750 LINC00205P59089 165 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 ZNRD1Q9P1U0 126 aa4.38□□□□□ -1.71
SCN1A-209ENST00000635750 PRRC2AP48634 2157 aaKnown RBP4.38□□□□□ -1.71
SCN1A-209ENST00000635750 JMJD7-PLA2G4BH0Y9G9 81 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 MYCNOSP40205 109 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 A0A0B4J2C4 111 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 GNRH2O43555 120 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 K7EM74 188 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 COX8AP10176 69 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 B3GALT5-AS1P59052 145 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 RIF1Q5UIP0 2472 aaKnown RBP4.37□□□□□ -1.71
SCN1A-209ENST00000635750 EML5Q05BV3 1969 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 IGKV1-6A0A0C4DH72 117 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 TRBV10-2A0A0K0K1G8 114 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 ATOX1O00244 68 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 DEFB135Q30KP9 77 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 C4orf3Q8WVX3 66 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 UPK3BQ9BT76 320 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 FGF23Q9GZV9 251 aaPredicted RBP4.37□□□□□ -1.71
SCN1A-209ENST00000635750 MALRD1Q5VYJ5 2156 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 PLXNA4Q9HCM2 1894 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 IGHV4OR15-8A0A075B7B6 117 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 A0A087WW49 117 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 J3QRE1 110 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 FHL1Q13642 323 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 PDE6GP18545 87 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 SPAG11BQ08648 103 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 RNF144BQ7Z419 303 aa4.37□□□□□ -1.71
SCN1A-209ENST00000635750 CREBBPQ92793 2442 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-209ENST00000635750 C17orf58Q2M2W7 97 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 KLK12Q9UKR0 248 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 A0A1W2PPM0 123 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 SIVA1O15304 175 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 ATRAIDQ6UW56 229 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 SORL1Q92673 2214 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 IGLV3-9A0A075B6K5 115 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 A0A087WZ39 114 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 IGLC2P0DOY2 106 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 IGLC3P0DOY3 106 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 UBE2D3P61077 147 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 ODF3L1Q8IXM7 274 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 ESM1Q9NQ30 184 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 CFC1BP0CG36 223 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 CFC1P0CG37 223 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 C18orf32Q8TCD1 76 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 DENND4CQ5VZ89 1909 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 NBASA2RRP1 2371 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 TMEM61Q8N0U2 210 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 MED13LQ71F56 2210 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 TAX1BP3O14907 124 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 WDR86Q86TI4 376 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 C11orf52Q96A22 123 aa4.36□□□□□ -1.71
SCN1A-209ENST00000635750 ZNF106Q9H2Y7 1883 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms