RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 CYP4F30PQ9H0H9 118 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 FAM135BQ49AJ0 1406 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 NBEAL1Q6ZS30 2694 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 BSNQ9UPA5 3926 aa-0.66□□□□□ -2.52
SRP54-214ENST00000630962 MYH9P35579 1960 aaKnown RBP-0.66□□□□□ -2.52
SRP54-214ENST00000630962 NUP210Q8TEM1 1887 aaPredicted RBP-0.67□□□□□ -2.52
SRP54-214ENST00000630962 BIVM-ERCC5R4GMW8 1640 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 MAP1LC3B2A6NCE7 125 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 PPP5D1E7EU14 171 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 H3BMG7 143 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 M0QZK8 103 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 ACYP2P14621 99 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 CRYBA4P53673 196 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 LSM3P62310 102 aaKnown RBP-0.67□□□□□ -2.52
SRP54-214ENST00000630962 Q6ZRX8 168 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 CYP2G1PQ6ZSU1 146 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 OR4S1Q8NGB4 309 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 ACANP16112 2415 aa-0.67□□□□□ -2.52
SRP54-214ENST00000630962 DOCK11Q5JSL3 2073 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 A0A087WTM6 91 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 TRBV7-1A0A0A6YYK4 115 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 SRP9P49458 86 aaKnown RBP-0.68□□□□□ -2.52
SRP54-214ENST00000630962 PCBD1P61457 104 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 C4orf33Q8N1A6 199 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 STX19Q8N4C7 294 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 BRK1Q8WUW1 75 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 VPS25Q9BRG1 176 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 LXNQ9BS40 222 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 LAMTOR2Q9Y2Q5 125 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 MYH1P12882 1939 aa-0.68□□□□□ -2.52
SRP54-214ENST00000630962 PTPRGP23470 1445 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 A0A0D9SFI3 127 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 HBDP02042 147 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 TCTAP57738 103 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 FAM74A4Q5TZK3 123 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 SLC48A1Q6P1K1 146 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 HRCT1Q6UXD1 115 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 Q8IZM0 81 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 UFC1Q9Y3C8 167 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 NF1P21359 2839 aa-0.69□□□□□ -2.52
SRP54-214ENST00000630962 SETXQ7Z333 2677 aaKnown RBP-0.69□□□□□ -2.52
SRP54-214ENST00000630962 PPRC1Q5VV67 1664 aaKnown RBP-0.69□□□□□ -2.52
SRP54-214ENST00000630962 LAMB1P07942 1786 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 KIDINS220Q9ULH0 1771 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 C2CD3Q4AC94 2353 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 WNK1Q9H4A3 2382 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 TRAV22A0A0B4J277 110 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 TMEM14DPA8MWL7 114 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 AKR1D1P51857 326 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 Q5VSD8 79 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 DCUN1D2Q6PH85 259 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 PPDPFLQ8WWR9 84 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 Q96NJ1 140 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 TRAPPC2LQ9UL33 140 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 MYH3P11055 1940 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 LRP1BQ9NZR2 4599 aa-0.7□□□□□ -2.52
SRP54-214ENST00000630962 FLNBO75369 2602 aaKnown RBP-0.7□□□□□ -2.52
SRP54-214ENST00000630962 CXorf51AA0A1B0GTR3 108 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 PNMA8CA0A1B0GUJ8 204 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 CCL3L1P16619 93 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 SPRR1AP35321 89 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 C3orf33Q6P1S2 294 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 TMED4Q7Z7H5 227 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 CNFNQ9BYD5 112 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 CBLN4Q9NTU7 201 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 NDUFAF1Q9Y375 327 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 V9GYV3 84 aa-0.71□□□□□ -2.52
SRP54-214ENST00000630962 CSPG4Q6UVK1 2322 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 SPTBN1Q01082 2364 aaKnown RBP-0.72□□□□□ -2.52
SRP54-214ENST00000630962 TRGV1A0A0A0MS02 117 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 TRBV7-6A0A0J9YX20 115 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 LOC107984640A0A0U1RRK4 108 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 A0A1B0GW64 132 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 DEGS1O15121 323 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 SPINK8P0C7L1 97 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 SERPINB1P30740 379 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 SSBP1Q04837 148 aaKnown RBP-0.72□□□□□ -2.52
SRP54-214ENST00000630962 INSL4Q14641 139 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 OR2T2Q6IF00 324 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 SLC25A26Q70HW3 274 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 STX12Q86Y82 276 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 C20orf197Q8N268 126 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 COX7B2Q8TF08 81 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 IFI27L1Q96BM0 104 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 CCDC32Q9BV29 185 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 BATF3Q9NR55 127 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 TAS2R8Q9NYW2 309 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 PLXNA1Q9UIW2 1896 aa-0.72□□□□□ -2.52
SRP54-214ENST00000630962 FAT2Q9NYQ8 4349 aa-0.72□□□□□ -2.53
SRP54-214ENST00000630962 STAB2Q8WWQ8 2551 aa-0.72□□□□□ -2.53
SRP54-214ENST00000630962 YTHDC2Q9H6S0 1430 aaKnown RBP-0.72□□□□□ -2.53
SRP54-214ENST00000630962 FER1L6Q2WGJ9 1857 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 PGRMC1O00264 195 aaKnown RBP-0.73□□□□□ -2.53
SRP54-214ENST00000630962 UQCRQO14949 82 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 SLC25A5P05141 298 aaKnown RBP-0.73□□□□□ -2.53
SRP54-214ENST00000630962 SLC25A6P12236 298 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 SPRR2BP35325 72 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 PLGLB1Q02325 96 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 OR8B8Q15620 311 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 SCP2D1Q9UJQ7 156 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms