RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PEF1Q9UBV8 284 aaKnown RBP3.59□□□□□ -1.83
LINC00550-201ENST00000629293 A8MWL6 223 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 KLK9Q2XQG4 91 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 ODF3L2Q3SX64 289 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 TCF24Q7RTU0 167 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 LYPD1Q8N2G4 141 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 GATD1Q8NB37 220 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 VN1R17PQ8TDU5 208 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 URB1-AS1Q96HZ7 61 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 KLK9Q9UKQ9 250 aa3.59□□□□□ -1.83
LINC00550-201ENST00000629293 MUC4Q99102 2169 aa3.59□□□□□ -1.84
LINC00550-201ENST00000629293 TRAV8-1A0A0A6YYK1 113 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 P01737 135 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 PMCHP20382 165 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 FOXA3P55318 350 aaPredicted RBP3.58□□□□□ -1.84
LINC00550-201ENST00000629293 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 GAGE2EQ4V326 116 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 GAGE2AQ6NT46 116 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 EXOC3-AS1Q8N2X6 119 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 TTC9CQ8N5M4 171 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 ZNF414Q96IQ9 312 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 MIEN1Q9BRT3 115 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 AAMDCQ9H7C9 122 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 GAGE2DQ9UEU5 116 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 RPH3ALQ9UNE2 315 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 RNF24Q9Y225 148 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 TRAV30A0A087WSZ9 112 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 C3orf79P0CE67 100 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 SSTP61278 116 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 NUTF2P61970 127 aaKnown RBP3.58□□□□□ -1.84
LINC00550-201ENST00000629293 RHOGP84095 191 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 GOLT1AQ6ZVE7 132 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 BPIFA4PQ86YQ2 179 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 VAMP8Q9BV40 100 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 FCGR2BP31994 310 aaPredicted RBP3.58□□□□□ -1.84
LINC00550-201ENST00000629293 KRTDAPP60985 99 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 PDE6HQ13956 83 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 COX8CQ7Z4L0 72 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 ZC2HC1AQ96GY0 325 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 C17orf77Q96MU5 243 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 SIGLEC8Q9NYZ4 499 aa3.58□□□□□ -1.84
LINC00550-201ENST00000629293 M0R143 59 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 IL4P05112 153 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 FAM19A2Q8N3H0 131 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 ZNF580Q9UK33 172 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 ZFP30Q9Y2G7 519 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 PAM16Q9Y3D7 125 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 KMT2AQ03164 3969 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 C2orf70A6NJV1 201 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 ATP5G2Q06055 141 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 PSG3Q16557 428 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 DEFB135Q30KP9 77 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 PRNTQ86SH4 94 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 PGLYRP4Q96LB8 373 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 MSRB1Q9NZV6 116 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 LOC102724200A0A096LPH7 203 aaPredicted RBP3.57□□□□□ -1.84
LINC00550-201ENST00000629293 A0A0J9YWU9 116 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 GNG7O60262 68 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 CRIP1P50238 77 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 C15orf32Q32M92 178 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 EBLN2Q6P2I7 272 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 OR2D3Q8NGH3 330 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 CHCHD1Q96BP2 118 aaKnown RBP3.57□□□□□ -1.84
LINC00550-201ENST00000629293 NDFIP1Q9BT67 221 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 C21orf62Q9NYP8 219 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 PSG8Q9UQ74 426 aa3.57□□□□□ -1.84
LINC00550-201ENST00000629293 KIAA1109Q2LD37 5005 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 IGKV3-7A0A075B6H7 116 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 IGHV3OR16-8A0A075B7F1 116 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 SERTM2A0A1B0GWG4 89 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 CRXO43186 299 aaPredicted RBP3.56□□□□□ -1.84
LINC00550-201ENST00000629293 NDUFB8O95169 186 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 RPL35AP18077 110 aaKnown RBP3.56□□□□□ -1.84
LINC00550-201ENST00000629293 FAM162BQ5T6X4 162 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 CLEC19AQ6UXS0 136 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 TMEM61Q8N0U2 210 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 TXN2Q99757 166 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 Q9H8V8 135 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 HSBP1O75506 76 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 IGLC3P0DOY3 106 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 NTF3P20783 257 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 SPATA45Q537H7 98 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 RNASEKQ6P5S7 137 aaKnown RBP3.56□□□□□ -1.84
LINC00550-201ENST00000629293 SPATA12Q7Z6I5 190 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 S100A7AQ86SG5 101 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 PCLOQ9Y6V0 5065 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 IGHV1-24A0A0C4DH33 117 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 A0A1B0GW15 77 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 K7EQM0 130 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 M0R2Z0 102 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 M0R3E3 92 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 CTSGP08311 255 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
LINC00550-201ENST00000629293 PMCHL1Q16048 86 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 DEFB114Q30KQ6 69 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 Q6AWC8 147 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 ZNF705AQ6ZN79 300 aaPredicted RBP3.56□□□□□ -1.84
LINC00550-201ENST00000629293 BORCS7Q96B45 105 aa3.56□□□□□ -1.84
LINC00550-201ENST00000629293 USMG5Q96IX5 58 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms