RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ORMDL2Q53FV1 153 aa11.66□□□□□ -0.54
PMS1-221ENST00000624204 CRLF1O75462 422 aa11.66□□□□□ -0.54
PMS1-221ENST00000624204 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
PMS1-221ENST00000624204 SUMO2P61956 95 aaKnown RBP11.66□□□□□ -0.54
PMS1-221ENST00000624204 FANCD2OSQ96PS1 177 aa11.66□□□□□ -0.54
PMS1-221ENST00000624204 CELSR1Q9NYQ6 3014 aa11.65□□□□□ -0.54
PMS1-221ENST00000624204 Q6ZS46 218 aa11.65□□□□□ -0.54
PMS1-221ENST00000624204 AGPAT4-IT1Q9H0P7 198 aa11.65□□□□□ -0.54
PMS1-221ENST00000624204 FAM215AQ9Y5M1 114 aa11.65□□□□□ -0.54
PMS1-221ENST00000624204 NBR2O15453 112 aa11.65□□□□□ -0.54
PMS1-221ENST00000624204 CLEC3BP05452 202 aa11.65□□□□□ -0.54
PMS1-221ENST00000624204 CFC1BP0CG36 223 aa11.65□□□□□ -0.54
PMS1-221ENST00000624204 CFC1P0CG37 223 aa11.65□□□□□ -0.54
PMS1-221ENST00000624204 F5H697 171 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 IGF1P05019 195 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 C10orf126Q8N4M7 172 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 LINC00527Q9UJ94 153 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 AKAP13Q12802 2813 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 IGHV7-4-1A0A0J9YVY3 117 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 ADARB2-AS1A8MUL3 147 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 F8W735 103 aaPredicted RBP11.64□□□□□ -0.55
PMS1-221ENST00000624204 RHODO00212 210 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 SRSF2Q01130 221 aaKnown RBP11.64□□□□□ -0.55
PMS1-221ENST00000624204 NTN5Q8WTR8 489 aaPredicted RBP11.64□□□□□ -0.55
PMS1-221ENST00000624204 TOMM6Q96B49 74 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 CITED1Q99966 193 aa11.64□□□□□ -0.55
PMS1-221ENST00000624204 A0A0J9YY99 117 aa11.63□□□□□ -0.55
PMS1-221ENST00000624204 IFITM1P13164 125 aa11.63□□□□□ -0.55
PMS1-221ENST00000624204 RPL32P62910 135 aaKnown RBP11.63□□□□□ -0.55
PMS1-221ENST00000624204 PRO1854Q9UHT4 67 aa11.63□□□□□ -0.55
PMS1-221ENST00000624204 TRAV2A0A0B4J234 112 aa11.63□□□□□ -0.55
PMS1-221ENST00000624204 TNFRSF13BO14836 293 aaPredicted RBP11.63□□□□□ -0.55
PMS1-221ENST00000624204 HERVK_113P61574 105 aa11.63□□□□□ -0.55
PMS1-221ENST00000624204 C11orf86A6NJI1 115 aa11.62□□□□□ -0.55
PMS1-221ENST00000624204 IGLV11-55A0A075B6I3 123 aa11.62□□□□□ -0.55
PMS1-221ENST00000624204 PRSS2P07478 247 aa11.62□□□□□ -0.55
PMS1-221ENST00000624204 NUP37Q8NFH4 326 aa11.62□□□□□ -0.55
PMS1-221ENST00000624204 DUSP14O95147 198 aaKnown RBP11.61□□□□□ -0.55
PMS1-221ENST00000624204 CTSGP08311 255 aa11.61□□□□□ -0.55
PMS1-221ENST00000624204 SRD5A1P18405 259 aa11.61□□□□□ -0.55
PMS1-221ENST00000624204 COL27A1Q8IZC6 1860 aaPredicted RBP11.61□□□□□ -0.55
PMS1-221ENST00000624204 COX6B1P14854 86 aa11.61□□□□□ -0.55
PMS1-221ENST00000624204 FAM159AQ6UWV7 190 aa11.61□□□□□ -0.55
PMS1-221ENST00000624204 FAM74A4Q5TZK3 123 aa11.61□□□□□ -0.55
PMS1-221ENST00000624204 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
PMS1-221ENST00000624204 RNASE6Q93091 150 aaKnown RBP11.6□□□□□ -0.55
PMS1-221ENST00000624204 PSMG3-AS1Q96PY0 264 aa11.6□□□□□ -0.55
PMS1-221ENST00000624204 CD59P13987 128 aa11.59□□□□□ -0.55
PMS1-221ENST00000624204 ZNF672Q499Z4 452 aaPredicted RBP11.59□□□□□ -0.55
PMS1-221ENST00000624204 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
PMS1-221ENST00000624204 SBSPONQ8IVN8 264 aa11.59□□□□□ -0.55
PMS1-221ENST00000624204 Q8N1Y9 231 aa11.59□□□□□ -0.55
PMS1-221ENST00000624204 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.55
PMS1-221ENST00000624204 IGHV3-30P01768 117 aa11.58□□□□□ -0.55
PMS1-221ENST00000624204 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.55
PMS1-221ENST00000624204 CLEC19AQ6UXS0 136 aa11.58□□□□□ -0.55
PMS1-221ENST00000624204 KAAG1Q9UBP8 84 aa11.58□□□□□ -0.55
PMS1-221ENST00000624204 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.55
PMS1-221ENST00000624204 A4D1N5 150 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 C15orf53Q8NAA6 179 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 TIMD4Q96H15 378 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
PMS1-221ENST00000624204 MSRB2Q9Y3D2 182 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 PHLDA3Q9Y5J5 127 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 ASIPP42127 132 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 TCF15Q12870 199 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 RNF5Q99942 180 aa11.58□□□□□ -0.56
PMS1-221ENST00000624204 CSPG4Q6UVK1 2322 aa11.57□□□□□ -0.56
PMS1-221ENST00000624204 TRAV8-4A0A0B4J246 113 aa11.57□□□□□ -0.56
PMS1-221ENST00000624204 TP53TG1Q9Y2A0 90 aa11.57□□□□□ -0.56
PMS1-221ENST00000624204 A0A087WWL8 130 aa11.57□□□□□ -0.56
PMS1-221ENST00000624204 IGKV3-20P01619 116 aa11.56□□□□□ -0.56
PMS1-221ENST00000624204 FAM110AQ9BQ89 295 aa11.56□□□□□ -0.56
PMS1-221ENST00000624204 DPM3Q9P2X0 92 aa11.56□□□□□ -0.56
PMS1-221ENST00000624204 LGALS3P17931 250 aaKnown RBP11.56□□□□□ -0.56
PMS1-221ENST00000624204 F6UB75 175 aa11.56□□□□□ -0.56
PMS1-221ENST00000624204 CRYGDP07320 174 aa11.56□□□□□ -0.56
PMS1-221ENST00000624204 MEIG1Q5JSS6 88 aa11.56□□□□□ -0.56
PMS1-221ENST00000624204 BUB3O43684 328 aa11.55□□□□□ -0.56
PMS1-221ENST00000624204 SLC25A29Q8N8R3 303 aa11.55□□□□□ -0.56
PMS1-221ENST00000624204 DPH3P1Q9H4G8 78 aa11.55□□□□□ -0.56
PMS1-221ENST00000624204 JPT2Q9H910 190 aa11.55□□□□□ -0.56
PMS1-221ENST00000624204 ZNF883P0CG24 379 aa11.55□□□□□ -0.56
PMS1-221ENST00000624204 PRR9Q5T870 116 aa11.55□□□□□ -0.56
PMS1-221ENST00000624204 C16orf92Q96LL3 132 aa11.55□□□□□ -0.56
PMS1-221ENST00000624204 A0A0U1RRA0 63 aa11.54□□□□□ -0.56
PMS1-221ENST00000624204 HTN1P15515 57 aa11.54□□□□□ -0.56
PMS1-221ENST00000624204 C15orf32Q32M92 178 aa11.54□□□□□ -0.56
PMS1-221ENST00000624204 ELANEP08246 267 aa11.54□□□□□ -0.56
PMS1-221ENST00000624204 LINC00477Q96M19 166 aa11.54□□□□□ -0.56
PMS1-221ENST00000624204 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
PMS1-221ENST00000624204 RBAKDNA6NC62 111 aa11.54□□□□□ -0.56
PMS1-221ENST00000624204 RNASE4P34096 147 aaKnown RBP11.54□□□□□ -0.56
PMS1-221ENST00000624204 J3QQQ9 107 aa11.53□□□□□ -0.56
PMS1-221ENST00000624204 GNRH2O43555 120 aa11.53□□□□□ -0.56
PMS1-221ENST00000624204 SETD2Q9BYW2 2564 aaPredicted RBP11.53□□□□□ -0.56
PMS1-221ENST00000624204 LY6LH3BQJ8 138 aa11.53□□□□□ -0.56
PMS1-221ENST00000624204 IGHV3-33P01772 117 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms