RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ATP5G3P48201 142 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 PPT1P50897 306 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 OR5I1Q13606 314 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 CD164L2Q6UWJ8 174 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 TMEM256Q8N2U0 113 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 TMEM75Q8N9X5 138 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 ZNRF2Q8NHG8 242 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 MRPL53Q96EL3 112 aaKnown RBP3.15□□□□□ -1.91
CUL3-216ENST00000617432 VSIG2Q96IQ7 327 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 ODF3Q96PU9 254 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 MRPL32Q9BYC8 188 aaKnown RBP3.15□□□□□ -1.91
CUL3-216ENST00000617432 GFRA4Q9GZZ7 299 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 BATF3Q9NR55 127 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 ZNF492Q9P255 531 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 RNF24Q9Y225 148 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 TIMM8BQ9Y5J9 83 aaPredicted RBP3.15□□□□□ -1.91
CUL3-216ENST00000617432 PKD1P98161 4303 aa3.15□□□□□ -1.91
CUL3-216ENST00000617432 TRGV1A0A0A0MS02 117 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 TEX48A0A1B0GUV7 120 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 PGPA6NDG6 321 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 C17orf112F2Z3M2 114 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 PTTG1O95997 202 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 IFNA5P01569 189 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 SLC25A5P05141 298 aaKnown RBP3.14□□□□□ -1.91
CUL3-216ENST00000617432 SFTA3P0C7M3 94 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 ARL14EPLP0DKL9 152 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 CRISP2P16562 243 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 ATP6V0CP27449 155 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 ZNF80P51504 273 aaPredicted RBP3.14□□□□□ -1.91
CUL3-216ENST00000617432 SNRPEP62304 92 aaKnown RBP3.14□□□□□ -1.91
CUL3-216ENST00000617432 CYCSP99999 105 aaKnown RBP3.14□□□□□ -1.91
CUL3-216ENST00000617432 PDE6HQ13956 83 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 ZNF726P1Q15940 193 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 ESRGQ1W209 222 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 RPL7L1Q6DKI1 246 aaKnown RBP3.14□□□□□ -1.91
CUL3-216ENST00000617432 PRR27Q6MZM9 219 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 GOLT1AQ6ZVE7 132 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 S100A7AQ86SG5 101 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 SMIM29Q86T20 159 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 OR4C5Q8NGB2 326 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 SCGB1C1Q8TD33 95 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 LINC00477Q96M19 166 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 MED28Q9H204 178 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 NAGKQ9UJ70 344 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 KIAA1109Q2LD37 5005 aa3.14□□□□□ -1.91
CUL3-216ENST00000617432 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 DYNC1H1Q14204 4646 aaKnown RBP3.13□□□□□ -1.91
CUL3-216ENST00000617432 IGHV1OR15-1A0A075B7D0 117 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 FXYD6-FXYD2A0A087WZ82 144 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 LOC100131303A0A0U1RQF7 123 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 SNURFLB1AK76 121 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 GGTLC3B5MD39 225 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 GNRH2O43555 120 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 SPINK4O60575 86 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 GPX1P07203 203 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 CFC1BP0CG36 223 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 CFC1P0CG37 223 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 PET100P0DJ07 73 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 M6PRP20645 277 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 ZNF138P52744 262 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 FGF8P55075 233 aaPredicted RBP3.13□□□□□ -1.91
CUL3-216ENST00000617432 TCL1AP56279 114 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 LGALS9BQ3B8N2 356 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 KHDC3LQ587J8 217 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 TMEM78Q5T7P6 136 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 ZNF493Q6ZR52 646 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 EIF4E3Q8N5X7 224 aaKnown RBP3.13□□□□□ -1.91
CUL3-216ENST00000617432 OR10G4Q8NGN3 311 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 OR10G9Q8NGN4 311 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 OR10G7Q8NGN6 311 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 FAM210BQ96KR6 192 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 AQP10Q96PS8 301 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 C20orf144Q9BQM9 153 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 PYGO2Q9BRQ0 406 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 DNAH11Q96DT5 4516 aa3.13□□□□□ -1.91
CUL3-216ENST00000617432 TRGV2A0A075B6R0 118 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 NBDYA0A0U1RRE5 68 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 RAB19A4D1S5 217 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 VCYO14598 125 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 TYMSP04818 313 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 GCHFRP30047 84 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 CDC34P49427 236 aaPredicted RBP3.12□□□□□ -1.91
CUL3-216ENST00000617432 FHITP49789 147 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 SEC61GP60059 68 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 DAZ2Q13117 558 aaKnown RBP3.12□□□□□ -1.91
CUL3-216ENST00000617432 ZNF266Q14584 549 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 TMEM183BQ1AE95 376 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 ACOT6Q3I5F7 207 aaPredicted RBP3.12□□□□□ -1.91
CUL3-216ENST00000617432 RNF212Q495C1 297 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 C14orf177Q52M58 125 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 RNASEKQ6P5S7 137 aaKnown RBP3.12□□□□□ -1.91
CUL3-216ENST00000617432 PQLC2Q6ZP29 291 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 TMEM183AQ8IXX5 376 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 C15orf53Q8NAA6 179 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 NEXN-AS1Q8NBZ9 246 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 OR11H4Q8NGC9 324 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 RXFP4Q8TDU9 374 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 GNPNAT1Q96EK6 184 aaPredicted RBP3.12□□□□□ -1.91
CUL3-216ENST00000617432 LINC00479Q96M42 142 aa3.12□□□□□ -1.91
CUL3-216ENST00000617432 LINC00467Q9BRT7 94 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms