RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 A0A0G2JLM5 398 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 SMIM17P0DL12 118 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 ODF1Q14990 250 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 SMIM15Q7Z3B0 74 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 Q8N8P6 123 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 VPS25Q9BRG1 176 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 NXT2Q9NPJ8 142 aaKnown RBP10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 H3BUA1 57 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 SYNJ2BPP57105 145 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 DEFB136Q30KP8 78 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 ATP6V0BQ99437 205 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 ITPR3Q14573 2671 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 TRAV12-3A0A0B4J271 114 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 VAMP3Q15836 100 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 GTSCR1Q86UQ5 136 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
PCDHGA3-202ENST00000612467 WNK1Q9H4A3 2382 aa10.56□□□□□ -0.72
PCDHGA3-202ENST00000612467 CHD6Q8TD26 2715 aa10.56□□□□□ -0.72
PCDHGA3-202ENST00000612467 ASIPP42127 132 aa10.56□□□□□ -0.72
PCDHGA3-202ENST00000612467 PSMG4Q5JS54 123 aa10.56□□□□□ -0.72
PCDHGA3-202ENST00000612467 RASL10AQ92737 203 aa10.56□□□□□ -0.72
PCDHGA3-202ENST00000612467 FAM19A4Q96LR4 140 aa10.56□□□□□ -0.72
PCDHGA3-202ENST00000612467 DUX3Q96PT4 197 aa10.56□□□□□ -0.72
PCDHGA3-202ENST00000612467 K7EMI3 77 aa10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 TMEM160Q9NX00 188 aa10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 A0A087WW49 117 aa10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 COX6B1P14854 86 aa10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 MRPL35Q9NZE8 188 aaKnown RBP10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 HHLA3Q9XRX5 114 aa10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 ACANP16112 2415 aa10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 NIPBLQ6KC79 2804 aaeCLIP10.55□□□□□ -0.72
PCDHGA3-202ENST00000612467 IGHV4-4A0A075B6R2 117 aa10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 A0A087WWL8 130 aa10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 HOXA3O43365 443 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 LAGE3Q14657 143 aa10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 DPF1Q92782 380 aa10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 TMEM8BA6NDV4 472 aa10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 LINC01546A6NGU7 62 aa10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 BOD1L2Q8IYS8 172 aa10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 TENM4Q6N022 2769 aa10.54□□□□□ -0.72
PCDHGA3-202ENST00000612467 FLNAP21333 2647 aaKnown RBP10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 SLC25A16P16260 332 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 HIST2H2BCQ6DN03 193 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 DEFB125Q8N687 156 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 CST9LQ9H4G1 147 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 LENEPQ9Y5L5 61 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 BRI3O95415 125 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 TMEM97Q5BJF2 176 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 C12orf54Q6X4T0 127 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 ZNF843Q8N446 348 aa10.53□□□□□ -0.72
PCDHGA3-202ENST00000612467 ZC2HC1BQ5TFG8 222 aa10.52□□□□□ -0.72
PCDHGA3-202ENST00000612467 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.72
PCDHGA3-202ENST00000612467 TRAV8-6A0A0B4J262 113 aa10.52□□□□□ -0.73
PCDHGA3-202ENST00000612467 PRM2P04554 102 aa10.52□□□□□ -0.73
PCDHGA3-202ENST00000612467 CD7P09564 240 aa10.52□□□□□ -0.73
PCDHGA3-202ENST00000612467 IGHV4-31P0DP07 118 aa10.52□□□□□ -0.73
PCDHGA3-202ENST00000612467 OCIAD2Q56VL3 154 aa10.52□□□□□ -0.73
PCDHGA3-202ENST00000612467 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.73
PCDHGA3-202ENST00000612467 SPINK13Q1W4C9 94 aa10.51□□□□□ -0.73
PCDHGA3-202ENST00000612467 IGKCP01834 107 aa10.51□□□□□ -0.73
PCDHGA3-202ENST00000612467 SUMO2P61956 95 aaKnown RBP10.51□□□□□ -0.73
PCDHGA3-202ENST00000612467 RAB37Q96AX2 223 aa10.51□□□□□ -0.73
PCDHGA3-202ENST00000612467 DPH3P1Q9H4G8 78 aa10.51□□□□□ -0.73
PCDHGA3-202ENST00000612467 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
PCDHGA3-202ENST00000612467 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
PCDHGA3-202ENST00000612467 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
PCDHGA3-202ENST00000612467 MTORP42345 2549 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 KLLNB2CW77 178 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 GATA3P23771 443 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 HOXD3P31249 432 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 SLURP1P55000 103 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 RIPPLY3P57055 190 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 DSCR9P59020 149 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 FAM159AQ6UWV7 190 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 MYOZ3Q8TDC0 251 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 VPREB3Q9UKI3 123 aa10.5□□□□□ -0.73
PCDHGA3-202ENST00000612467 Q5PR19 223 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 ADAMTSL5Q6ZMM2 481 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 OR1N2Q8NGR9 330 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 K7EMT4 169 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 SAP30O75446 220 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 HTN1P15515 57 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 APRG1Q8IVJ8 170 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 CSTL1Q9H114 145 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 LINC00315P59091 139 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 MRAP2Q96G30 205 aa10.49□□□□□ -0.73
PCDHGA3-202ENST00000612467 DPM2O94777 84 aa10.48□□□□□ -0.73
PCDHGA3-202ENST00000612467 ID1P41134 155 aa10.48□□□□□ -0.73
PCDHGA3-202ENST00000612467 Q96MF0 132 aa10.48□□□□□ -0.73
PCDHGA3-202ENST00000612467 F5H697 171 aa10.48□□□□□ -0.73
PCDHGA3-202ENST00000612467 EMP1P54849 157 aa10.48□□□□□ -0.73
PCDHGA3-202ENST00000612467 Q6YL49 198 aa10.48□□□□□ -0.73
PCDHGA3-202ENST00000612467 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
PCDHGA3-202ENST00000612467 AP1S3Q96PC3 154 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms