RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ORMDL2Q53FV1 153 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 C8orf31Q8N9H6 132 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 SRSF8Q9BRL6 282 aaKnown RBP8.04□□□□□ -1.12
CTCFL-216ENST00000608263 RHPN1-AS1Q9BWJ2 59 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 GNRH2O43555 120 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 GAS8-AS1O95177 125 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 BLCAPP62952 87 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 PAX2Q02962 417 aa8.04□□□□□ -1.12
CTCFL-216ENST00000608263 FAM110DQ8TAY7 271 aaPredicted RBP8.04□□□□□ -1.12
CTCFL-216ENST00000608263 A0A1W2PPM0 123 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 ANXA2RQ3ZCQ2 193 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 C2orf66Q6UXQ4 117 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 ZFP36P26651 326 aaKnown RBP8.03□□□□□ -1.12
CTCFL-216ENST00000608263 LINC01587Q99440 93 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 TRBV25-1A0A075B6N4 114 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 TRAV12-2A0A075B6T6 113 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 H7C1H1 209 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 K7EP34 96 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 IGLV2-11P01706 119 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 Q8N8P6 123 aa8.03□□□□□ -1.12
CTCFL-216ENST00000608263 RPL35AP18077 110 aaKnown RBP8.02□□□□□ -1.12
CTCFL-216ENST00000608263 SH2D6Q7Z4S9 175 aa8.02□□□□□ -1.12
CTCFL-216ENST00000608263 RPL39LQ96EH5 51 aaKnown RBP8.02□□□□□ -1.12
CTCFL-216ENST00000608263 DPH3P1Q9H4G8 78 aa8.02□□□□□ -1.12
CTCFL-216ENST00000608263 CFAP47Q6ZTR5 3102 aa8.02□□□□□ -1.13
CTCFL-216ENST00000608263 A0A1B0GV72 72 aa8.02□□□□□ -1.13
CTCFL-216ENST00000608263 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
CTCFL-216ENST00000608263 DEFB136Q30KP8 78 aa8.02□□□□□ -1.13
CTCFL-216ENST00000608263 SYT8Q8NBV8 401 aa8.02□□□□□ -1.13
CTCFL-216ENST00000608263 OOSP1A8MZH6 123 aa8.02□□□□□ -1.13
CTCFL-216ENST00000608263 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
CTCFL-216ENST00000608263 SMPXQ9UHP9 88 aa8.02□□□□□ -1.13
CTCFL-216ENST00000608263 STHQ8IWL8 128 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 WFDC11Q8NEX6 87 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 UBE2E2Q96LR5 201 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 PEMTQ9UBM1 199 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 TEX48A0A1B0GUV7 120 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 KNCNA6PVL3 124 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 C9orf139Q6ZV77 190 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 TSSC4Q9Y5U2 329 aaPredicted RBP8.01□□□□□ -1.13
CTCFL-216ENST00000608263 WI2-2373I1.2A0A1W2PRP0 233 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 LINC01549A6NIU2 74 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 BUB3O43684 328 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 OR11H6Q8NGC7 330 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 LOC400499M0QZD8 3231 aa8.01□□□□□ -1.13
CTCFL-216ENST00000608263 TRBV7-1A0A0A6YYK4 115 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 HOXB4P17483 251 aaPredicted RBP8□□□□□ -1.13
CTCFL-216ENST00000608263 Q8N9W7 124 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 KLK9Q9UKQ9 250 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 SRSF2Q01130 221 aaKnown RBP8□□□□□ -1.13
CTCFL-216ENST00000608263 PRADC1Q9BSG0 188 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 TP53TG1Q9Y2A0 90 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 TRGV2A0A075B6R0 118 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 IGKV2D-26A0A0A0MRZ7 120 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 OVOL1O14753 267 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 IGF1P05019 195 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 SMIM2Q9BVW6 85 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 HLA-DRB4P13762 266 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 PLNP26678 52 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 ZNF876PQ49A33 203 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 C10orf105Q8TEF2 133 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 VCX2Q9H322 139 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 HLA-DRB4X5D2U9 266 aa8□□□□□ -1.13
CTCFL-216ENST00000608263 CRYGBP07316 175 aa7.99□□□□□ -1.13
CTCFL-216ENST00000608263 Q6ZQT7 251 aa7.99□□□□□ -1.13
CTCFL-216ENST00000608263 GATA3P23771 443 aa7.99□□□□□ -1.13
CTCFL-216ENST00000608263 SPINK13Q1W4C9 94 aa7.99□□□□□ -1.13
CTCFL-216ENST00000608263 BOD1L2Q8IYS8 172 aa7.99□□□□□ -1.13
CTCFL-216ENST00000608263 WFDC2Q14508 124 aa7.99□□□□□ -1.13
CTCFL-216ENST00000608263 GEMIN7Q9H840 131 aaKnown RBP7.99□□□□□ -1.13
CTCFL-216ENST00000608263 CENPVL3A0A0U1RRI6 287 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 HIST2H2BDQ6DRA6 164 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 CEND1Q8N111 149 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 ADGRG4Q8IZF6 3080 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 AGRNO00468 2067 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 TRBV12-3P01733 135 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 NPBQ8NG41 125 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 TNFRSF18Q9Y5U5 241 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 RAI1Q7Z5J4 1906 aaPredicted RBP7.98□□□□□ -1.13
CTCFL-216ENST00000608263 F8VRH5 84 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 ODF1Q14990 250 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 C12orf74Q32Q52 190 aa7.98□□□□□ -1.13
CTCFL-216ENST00000608263 RNASE13Q5GAN3 156 aaKnown RBP7.97□□□□□ -1.13
CTCFL-216ENST00000608263 BBC3Q96PG8 261 aaPredicted RBP7.97□□□□□ -1.13
CTCFL-216ENST00000608263 SPXQ9BT56 116 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 TRAV8-2A0A0B4J237 113 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 PRSS29PA6NIE9 313 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 ADARB2-AS1A8MUL3 147 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 RPL13AP40429 203 aaKnown RBP7.97□□□□□ -1.13
CTCFL-216ENST00000608263 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 TMEM262E9PQX1 116 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 PPP1R17O96001 155 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 FBXL19-AS1Q494R0 122 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 C2orf91Q6ZV80 131 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 JPT2Q9H910 190 aa7.97□□□□□ -1.13
CTCFL-216ENST00000608263 SDHAF1A6NFY7 115 aa7.96□□□□□ -1.13
CTCFL-216ENST00000608263 CRXO43186 299 aaPredicted RBP7.96□□□□□ -1.13
CTCFL-216ENST00000608263 DEFB131AP59861 70 aa7.96□□□□□ -1.13
CTCFL-216ENST00000608263 UNQ9165/PRO28630Q6UXU0 137 aa7.96□□□□□ -1.13
CTCFL-216ENST00000608263 A0A087WX48 190 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms