RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
CTSA-213ENST00000606782 KRBOX1C9JBD0 128 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 ORM1P02763 201 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 MGST1P10620 155 aaKnown RBP9.32□□□□□ -0.92
CTSA-213ENST00000606782 OR5I1Q13606 314 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 LINC01559Q495D7 138 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 DNLZQ5SXM8 178 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 IBA57Q5T440 356 aaKnown RBP9.32□□□□□ -0.92
CTSA-213ENST00000606782 LINC01551Q86U37 167 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 COMMD7Q86VX2 200 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 SDF2L1Q9HCN8 221 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 MDFICQ9P1T7 246 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 NAGKQ9UJ70 344 aa9.32□□□□□ -0.92
CTSA-213ENST00000606782 TRGV11A0A075B6L2 103 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 IGHV3-16A0A0C4DH30 117 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 TYMSP04818 313 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 SFTA3P0C7M3 94 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
CTSA-213ENST00000606782 C1orf134Q5TEV5 83 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 NUDT10Q8NFP7 164 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 DAZAP1Q96EP5 407 aaKnown RBP9.31□□□□□ -0.92
CTSA-213ENST00000606782 NUDT11Q96G61 164 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 GSN-AS1Q9NRJ2 163 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 PKD1P98161 4303 aa9.31□□□□□ -0.92
CTSA-213ENST00000606782 B4DEV8 164 aa9.3□□□□□ -0.92
CTSA-213ENST00000606782 MED14OSP0DP75 135 aa9.3□□□□□ -0.92
CTSA-213ENST00000606782 TCL1AP56279 114 aa9.3□□□□□ -0.92
CTSA-213ENST00000606782 FAM231DQ6ZW35 169 aa9.3□□□□□ -0.92
CTSA-213ENST00000606782 NAT8Q9UHE5 227 aa9.3□□□□□ -0.92
CTSA-213ENST00000606782 MUC4Q99102 2169 aa9.29□□□□□ -0.92
CTSA-213ENST00000606782 H3BNG1 76 aa9.29□□□□□ -0.92
CTSA-213ENST00000606782 M0R036 132 aa9.29□□□□□ -0.92
CTSA-213ENST00000606782 NUDT3O95989 172 aa9.29□□□□□ -0.92
CTSA-213ENST00000606782 CCL18P55774 89 aa9.29□□□□□ -0.92
CTSA-213ENST00000606782 RPL23P62829 140 aaKnown RBP9.29□□□□□ -0.92
CTSA-213ENST00000606782 C18orf15Q96N68 181 aa9.29□□□□□ -0.92
CTSA-213ENST00000606782 SPXQ9BT56 116 aa9.29□□□□□ -0.92
CTSA-213ENST00000606782 LINC00588Q9Y4M8 146 aa9.29□□□□□ -0.92
CTSA-213ENST00000606782 DNAH11Q96DT5 4516 aa9.28□□□□□ -0.92
CTSA-213ENST00000606782 NBDYA0A0U1RRE5 68 aa9.28□□□□□ -0.92
CTSA-213ENST00000606782 SNURFLB1AK76 121 aa9.28□□□□□ -0.92
CTSA-213ENST00000606782 SPINK4O60575 86 aa9.28□□□□□ -0.92
CTSA-213ENST00000606782 CXCL1P09341 107 aa9.28□□□□□ -0.92
CTSA-213ENST00000606782 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
CTSA-213ENST00000606782 ZNF415Q09FC8 603 aa9.28□□□□□ -0.92
CTSA-213ENST00000606782 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
CTSA-213ENST00000606782 GRIFINA4D1Z8 144 aa9.27□□□□□ -0.93
CTSA-213ENST00000606782 P01737 135 aa9.27□□□□□ -0.93
CTSA-213ENST00000606782 RPL19P84098 196 aaKnown RBP9.27□□□□□ -0.93
CTSA-213ENST00000606782 PTH2Q96A98 100 aa9.27□□□□□ -0.93
CTSA-213ENST00000606782 ISOC2Q96AB3 205 aa9.27□□□□□ -0.93
CTSA-213ENST00000606782 C9orf85Q96MD7 179 aa9.27□□□□□ -0.93
CTSA-213ENST00000606782 SCRT2Q9NQ03 307 aa9.27□□□□□ -0.93
CTSA-213ENST00000606782 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
CTSA-213ENST00000606782 IL36BQ9NZH7 164 aa9.27□□□□□ -0.93
CTSA-213ENST00000606782 TMSB15BA0A087X1C1 80 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 ARMS2P0C7Q2 107 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 HOXA5P20719 270 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 ASIPP42127 132 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 ERVFC1-1P60608 527 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 RPS20P60866 119 aaKnown RBP9.26□□□□□ -0.93
CTSA-213ENST00000606782 C10orf91Q5T1B1 145 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 OR2D3Q8NGH3 330 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 RASL10AQ92737 203 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 SSBP4Q9BWG4 385 aaPredicted RBP9.26□□□□□ -0.93
CTSA-213ENST00000606782 SEC11CQ9BY50 192 aa9.26□□□□□ -0.93
CTSA-213ENST00000606782 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 GAGE12BA1L429 117 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 M0R2P5 195 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
CTSA-213ENST00000606782 GAGE7O76087 117 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 GAGE12FP0CL80 117 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 GAGE12GP0CL81 117 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 GAGE12IP0CL82 117 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 ADCYAP1P18509 176 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 S100A4P26447 101 aaKnown RBP9.25□□□□□ -0.93
CTSA-213ENST00000606782 C6orf223Q8N319 242 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
CTSA-213ENST00000606782 RPP21Q9H633 154 aaKnown RBP9.25□□□□□ -0.93
CTSA-213ENST00000606782 XKRY2A2RUG3 117 aa9.24□□□□□ -0.93
CTSA-213ENST00000606782 F8W036 122 aa9.24□□□□□ -0.93
CTSA-213ENST00000606782 FOXA3P55318 350 aaPredicted RBP9.24□□□□□ -0.93
CTSA-213ENST00000606782 ADIRFQ15847 76 aa9.24□□□□□ -0.93
CTSA-213ENST00000606782 Q6ZTI0 123 aa9.24□□□□□ -0.93
CTSA-213ENST00000606782 SFRP2Q96HF1 295 aa9.24□□□□□ -0.93
CTSA-213ENST00000606782 Q9H8V8 135 aa9.24□□□□□ -0.93
CTSA-213ENST00000606782 DYNC1H1Q14204 4646 aaKnown RBP9.24□□□□□ -0.93
CTSA-213ENST00000606782 A8MWL6 223 aa9.23□□□□□ -0.93
CTSA-213ENST00000606782 SNAI2O43623 268 aa9.23□□□□□ -0.93
CTSA-213ENST00000606782 OR5AL1P0C617 328 aa9.23□□□□□ -0.93
CTSA-213ENST00000606782 IGLC6P0CF74 106 aa9.23□□□□□ -0.93
CTSA-213ENST00000606782 GZMBP10144 247 aa9.23□□□□□ -0.93
CTSA-213ENST00000606782 TNP2Q05952 138 aa9.23□□□□□ -0.93
CTSA-213ENST00000606782 PNRC1Q12796 327 aaPredicted RBP9.23□□□□□ -0.93
CTSA-213ENST00000606782 ESRGQ1W209 222 aa9.23□□□□□ -0.93
CTSA-213ENST00000606782 CT83Q5H943 113 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms