RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 A0A087WWC5 75 aa11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 A8MWV9 139 aa11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 GCGP01275 180 aa11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 SEC11BP0C7V7 166 aa11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 CDC34P49427 236 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 SERF2P84101 59 aa11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 Q9HAA7 133 aa11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 WFDC1Q9HC57 220 aa11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 TMEM167BQ9NRX6 74 aa11.88□□□□□ -0.51
SHKBP1-227ENST00000602011 DNAH8Q96JB1 4490 aa11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 PLA2G1BP04054 148 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 RAB2AP61019 212 aa11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 GNG5P63218 68 aa11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 FLI1Q01543 452 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 PSMG3Q9BT73 122 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
SHKBP1-227ENST00000602011 IGHV3-30P01768 117 aa11.86□□□□□ -0.51
SHKBP1-227ENST00000602011 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
SHKBP1-227ENST00000602011 IGHV3-30-3P0DP02 117 aa11.86□□□□□ -0.51
SHKBP1-227ENST00000602011 IGHV3-30-5P0DP03 117 aa11.86□□□□□ -0.51
SHKBP1-227ENST00000602011 ZNF506Q5JVG8 444 aa11.86□□□□□ -0.51
SHKBP1-227ENST00000602011 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
SHKBP1-227ENST00000602011 CYB561D1Q8N8Q1 229 aa11.86□□□□□ -0.51
SHKBP1-227ENST00000602011 TMEM75Q8N9X5 138 aa11.86□□□□□ -0.51
SHKBP1-227ENST00000602011 PGPEP1LA6NFU8 196 aa11.85□□□□□ -0.51
SHKBP1-227ENST00000602011 CXorf1O96002 111 aa11.85□□□□□ -0.51
SHKBP1-227ENST00000602011 GCHFRP30047 84 aa11.85□□□□□ -0.51
SHKBP1-227ENST00000602011 ZNF80P51504 273 aaPredicted RBP11.85□□□□□ -0.51
SHKBP1-227ENST00000602011 SUMO1P63165 101 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-227ENST00000602011 RAB24Q969Q5 203 aa11.85□□□□□ -0.51
SHKBP1-227ENST00000602011 RMI2Q96E14 147 aa11.85□□□□□ -0.51
SHKBP1-227ENST00000602011 C11orf21Q9P2W6 132 aa11.85□□□□□ -0.51
SHKBP1-227ENST00000602011 IGHV3-73A0A0B4J1V6 119 aa11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 GGTLC3B5MD39 225 aa11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 HMGB3O15347 200 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 EIF3GO75821 320 aaKnown RBP eCLIP11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 OR2T35Q8NGX2 323 aa11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 SGK494Q96LW2 274 aa11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 TNFSF18Q9UNG2 199 aa11.84□□□□□ -0.51
SHKBP1-227ENST00000602011 A0A1W2PRE2 83 aa11.83□□□□□ -0.52
SHKBP1-227ENST00000602011 J3QL48 77 aa11.83□□□□□ -0.52
SHKBP1-227ENST00000602011 IGLV2-11P01706 119 aa11.83□□□□□ -0.52
SHKBP1-227ENST00000602011 Q6ZSA8 131 aa11.83□□□□□ -0.52
SHKBP1-227ENST00000602011 PRNTQ86SH4 94 aa11.83□□□□□ -0.52
SHKBP1-227ENST00000602011 NKX6-2Q9C056 277 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-227ENST00000602011 ACTR3CQ9C0K3 210 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-227ENST00000602011 INO80EQ8NBZ0 244 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-227ENST00000602011 PARLQ9H300 379 aa11.82□□□□□ -0.52
SHKBP1-227ENST00000602011 RHODO00212 210 aa11.81□□□□□ -0.52
SHKBP1-227ENST00000602011 LGALSLQ3ZCW2 172 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-227ENST00000602011 Q8N976 141 aa11.81□□□□□ -0.52
SHKBP1-227ENST00000602011 DEFB104AQ8WTQ1 72 aa11.81□□□□□ -0.52
SHKBP1-227ENST00000602011 IL36BQ9NZH7 164 aa11.81□□□□□ -0.52
SHKBP1-227ENST00000602011 FAM30AQ9NZY2 134 aa11.81□□□□□ -0.52
SHKBP1-227ENST00000602011 URGCP-MRPS24S4R325 110 aa11.81□□□□□ -0.52
SHKBP1-227ENST00000602011 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 ATP6V0CP27449 155 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 ASIPP42127 132 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 ELOBQ15370 118 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 Q5BKY6 102 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 HSD17B11Q8NBQ5 300 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 SYT8Q8NBV8 401 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 LINC00479Q96M42 142 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 AQP10Q96PS8 301 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 CHCHD7Q9BUK0 85 aa11.8□□□□□ -0.52
SHKBP1-227ENST00000602011 GAGE12JA6NER3 117 aa11.79□□□□□ -0.52
SHKBP1-227ENST00000602011 GAGE1Q13065 139 aa11.79□□□□□ -0.52
SHKBP1-227ENST00000602011 GAGE4Q13068 117 aa11.79□□□□□ -0.52
SHKBP1-227ENST00000602011 GAGE5Q13069 117 aa11.79□□□□□ -0.52
SHKBP1-227ENST00000602011 GAGE13Q4V321 117 aa11.79□□□□□ -0.52
SHKBP1-227ENST00000602011 DNLZQ5SXM8 178 aa11.79□□□□□ -0.52
SHKBP1-227ENST00000602011 IGKV3D-20A0A0C4DH25 116 aa11.78□□□□□ -0.52
SHKBP1-227ENST00000602011 KRTAP29-1A8MX34 341 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-227ENST00000602011 HIST1H2BAQ96A08 127 aa11.78□□□□□ -0.52
SHKBP1-227ENST00000602011 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
SHKBP1-227ENST00000602011 HMSDA8MTL9 139 aa11.77□□□□□ -0.53
SHKBP1-227ENST00000602011 IFNA7P01567 189 aa11.77□□□□□ -0.53
SHKBP1-227ENST00000602011 ZFP30Q9Y2G7 519 aa11.77□□□□□ -0.53
SHKBP1-227ENST00000602011 UFSP1Q6NVU6 142 aa11.76□□□□□ -0.53
SHKBP1-227ENST00000602011 KCNIP4Q6PIL6 250 aa11.76□□□□□ -0.53
SHKBP1-227ENST00000602011 COX8CQ7Z4L0 72 aa11.76□□□□□ -0.53
SHKBP1-227ENST00000602011 DAZ4Q86SG3 579 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-227ENST00000602011 TCTE3Q8IZS6 198 aa11.76□□□□□ -0.53
SHKBP1-227ENST00000602011 DAZ3Q9NR90 486 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-227ENST00000602011 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
SHKBP1-227ENST00000602011 hCG_2014768A0A024R1R8 64 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 TRBV10-1A0A0K0K1A3 114 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 RNF222A6NCQ9 220 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 RBFOX3A6NFN3 312 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 B4DEV8 164 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 G3V3Q6 166 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 AKAP14Q86UN6 197 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 LINC00528Q8N1L1 170 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 OR11H4Q8NGC9 324 aa11.75□□□□□ -0.53
SHKBP1-227ENST00000602011 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms