RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 KCNRGQ8N5I3 272 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 PCNPQ8WW12 178 aaKnown RBP10.38□□□□□ -0.75
LIG1-214ENST00000597146 TVP23CQ96ET8 276 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 C8orf49Q96NF6 230 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 PRO0255Q9UI72 69 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
LIG1-214ENST00000597146 HMSDA8MTL9 139 aa10.37□□□□□ -0.75
LIG1-214ENST00000597146 M0R2P5 195 aa10.37□□□□□ -0.75
LIG1-214ENST00000597146 ZNF726P1Q15940 193 aa10.37□□□□□ -0.75
LIG1-214ENST00000597146 WFDC10BQ8IUB3 73 aa10.37□□□□□ -0.75
LIG1-214ENST00000597146 TRAV34A0A0B4J273 112 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 GGTLC3B5MD39 225 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 C9JCJ5 164 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 G3V3Q6 166 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 MRPL23Q16540 153 aaKnown RBP10.36□□□□□ -0.75
LIG1-214ENST00000597146 TDRG1Q3Y452 100 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 Q8N814 137 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 TMEM75Q8N9X5 138 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 FAM213BQ8TBF2 198 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
LIG1-214ENST00000597146 TRAV9-2A0A087WT02 112 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 IGHV3-16A0A0C4DH30 117 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 UMAD1C9J7I0 102 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 PEX7O00628 323 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 SFTA3P0C7M3 94 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
LIG1-214ENST00000597146 UBE2G1P62253 170 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 ZNF345Q14585 488 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 LYPD5Q6UWN5 251 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 Q6ZSA8 131 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 RASL10AQ92737 203 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 HIST1H2BAQ96A08 127 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 LINC00479Q96M42 142 aa10.35□□□□□ -0.75
LIG1-214ENST00000597146 A0A1B0GV50 99 aa10.34□□□□□ -0.75
LIG1-214ENST00000597146 FAM74A7A6NL05 159 aa10.34□□□□□ -0.75
LIG1-214ENST00000597146 FABP5P3A8MUU1 101 aa10.34□□□□□ -0.75
LIG1-214ENST00000597146 C1QBP02746 253 aa10.34□□□□□ -0.75
LIG1-214ENST00000597146 TYMSP04818 313 aa10.34□□□□□ -0.75
LIG1-214ENST00000597146 PFN1P07737 140 aaKnown RBP10.34□□□□□ -0.75
LIG1-214ENST00000597146 SEC11BP0C7V7 166 aa10.34□□□□□ -0.75
LIG1-214ENST00000597146 CRYBA4P53673 196 aa10.34□□□□□ -0.75
LIG1-214ENST00000597146 FHL2Q14192 279 aa10.34□□□□□ -0.75
LIG1-214ENST00000597146 BCL2L11O43521 198 aa10.33□□□□□ -0.76
LIG1-214ENST00000597146 PSCAO43653 123 aa10.33□□□□□ -0.76
LIG1-214ENST00000597146 ORM1P02763 201 aa10.33□□□□□ -0.76
LIG1-214ENST00000597146 ZNF80P51504 273 aaPredicted RBP10.33□□□□□ -0.76
LIG1-214ENST00000597146 ZNF876PQ49A33 203 aa10.33□□□□□ -0.76
LIG1-214ENST00000597146 TMUB2Q71RG4 321 aa10.33□□□□□ -0.76
LIG1-214ENST00000597146 OR11H4Q8NGC9 324 aa10.33□□□□□ -0.76
LIG1-214ENST00000597146 ZNF479Q96JC4 524 aa10.33□□□□□ -0.76
LIG1-214ENST00000597146 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
LIG1-214ENST00000597146 IGLV2-11P01706 119 aa10.32□□□□□ -0.76
LIG1-214ENST00000597146 TPT1P13693 172 aaKnown RBP10.32□□□□□ -0.76
LIG1-214ENST00000597146 SRIP30626 198 aa10.32□□□□□ -0.76
LIG1-214ENST00000597146 FHITP49789 147 aa10.32□□□□□ -0.76
LIG1-214ENST00000597146 EIF5AL1Q6IS14 154 aaKnown RBP10.32□□□□□ -0.76
LIG1-214ENST00000597146 NEGR1Q7Z3B1 354 aa10.32□□□□□ -0.76
LIG1-214ENST00000597146 ZFP30Q9Y2G7 519 aa10.32□□□□□ -0.76
LIG1-214ENST00000597146 ARL2-SNX15V9GYD0 113 aa10.32□□□□□ -0.76
LIG1-214ENST00000597146 PAGE4O60829 102 aa10.31□□□□□ -0.76
LIG1-214ENST00000597146 CRYGDP07320 174 aa10.31□□□□□ -0.76
LIG1-214ENST00000597146 H2AFB1P0C5Y9 115 aa10.31□□□□□ -0.76
LIG1-214ENST00000597146 GYPEP15421 78 aa10.31□□□□□ -0.76
LIG1-214ENST00000597146 EVI2AP22794 236 aa10.31□□□□□ -0.76
LIG1-214ENST00000597146 SCXQ7RTU7 201 aa10.31□□□□□ -0.76
LIG1-214ENST00000597146 TXNDC17Q9BRA2 123 aa10.31□□□□□ -0.76
LIG1-214ENST00000597146 TNXBP22105 4242 aa10.31□□□□□ -0.76
LIG1-214ENST00000597146 TEX46H3BTG2 121 aa10.3□□□□□ -0.76
LIG1-214ENST00000597146 AKR1C3P42330 323 aa10.3□□□□□ -0.76
LIG1-214ENST00000597146 DPPA3Q6W0C5 159 aa10.3□□□□□ -0.76
LIG1-214ENST00000597146 NHLRC2Q8NBF2 726 aa10.3□□□□□ -0.76
LIG1-214ENST00000597146 FMC1Q96HJ9 113 aa10.3□□□□□ -0.76
LIG1-214ENST00000597146 ASIPP42127 132 aa10.29□□□□□ -0.76
LIG1-214ENST00000597146 LGALSLQ3ZCW2 172 aaPredicted RBP10.29□□□□□ -0.76
LIG1-214ENST00000597146 MBD3L1Q8WWY6 194 aa10.29□□□□□ -0.76
LIG1-214ENST00000597146 TCEAL7Q9BRU2 100 aa10.29□□□□□ -0.76
LIG1-214ENST00000597146 PRADC1Q9BSG0 188 aa10.29□□□□□ -0.76
LIG1-214ENST00000597146 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
LIG1-214ENST00000597146 IGHV3-73A0A0B4J1V6 119 aa10.28□□□□□ -0.76
LIG1-214ENST00000597146 B4DEV8 164 aa10.28□□□□□ -0.76
LIG1-214ENST00000597146 K7EP13 123 aa10.28□□□□□ -0.76
LIG1-214ENST00000597146 CIDEAO60543 219 aa10.28□□□□□ -0.76
LIG1-214ENST00000597146 S100A9P06702 114 aaKnown RBP10.28□□□□□ -0.76
LIG1-214ENST00000597146 SH2D6Q7Z4S9 175 aa10.28□□□□□ -0.76
LIG1-214ENST00000597146 Q86TA4 180 aa10.28□□□□□ -0.76
LIG1-214ENST00000597146 K7EQD1 137 aa10.27□□□□□ -0.77
LIG1-214ENST00000597146 M0R036 132 aa10.27□□□□□ -0.77
LIG1-214ENST00000597146 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
LIG1-214ENST00000597146 PGPEP1LA6NFU8 196 aa10.26□□□□□ -0.77
LIG1-214ENST00000597146 WFDC2Q14508 124 aa10.26□□□□□ -0.77
LIG1-214ENST00000597146 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
LIG1-214ENST00000597146 C10orf126Q8N4M7 172 aa10.26□□□□□ -0.77
LIG1-214ENST00000597146 Q9HAA7 133 aa10.26□□□□□ -0.77
LIG1-214ENST00000597146 TMSB15BA0A087X1C1 80 aa10.25□□□□□ -0.77
LIG1-214ENST00000597146 GRIFINA4D1Z8 144 aa10.25□□□□□ -0.77
LIG1-214ENST00000597146 RS1O15537 224 aa10.25□□□□□ -0.77
LIG1-214ENST00000597146 SH2D1AO60880 128 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms