RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 CD300EQ496F6 205 aaPredicted RBP6.95□□□□□ -1.3
VPS25-205ENST00000590339 MRPL51Q4U2R6 128 aaKnown RBP6.95□□□□□ -1.3
VPS25-205ENST00000590339 AMN1Q8IY45 258 aa6.95□□□□□ -1.3
VPS25-205ENST00000590339 RNF185Q96GF1 192 aa6.95□□□□□ -1.3
VPS25-205ENST00000590339 ZNF256Q9Y2P7 627 aaPredicted RBP6.95□□□□□ -1.3
VPS25-205ENST00000590339 NOTCH3Q9UM47 2321 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 MUC21A0A0G2JKD1 596 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 MUC21A0A140T8X8 626 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 RBMY1BA6NDE4 496 aaKnown RBP6.94□□□□□ -1.3
VPS25-205ENST00000590339 RBMY1EA6NEQ0 496 aaKnown RBP6.94□□□□□ -1.3
VPS25-205ENST00000590339 OR4C46A6NHA9 309 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 H3BVH4 76 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 K7EIL1 84 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 RBMY1DP0C7P1 496 aaKnown RBP6.94□□□□□ -1.3
VPS25-205ENST00000590339 TSPOP30536 169 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 DEFB131AP59861 70 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 TWIST1Q15672 202 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 MUC21Q5SSG8 566 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 CDPF1Q6NVV7 123 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 Q6ZWC4 215 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 NIT1Q86X76 327 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 CHCHD1Q96BP2 118 aaKnown RBP6.94□□□□□ -1.3
VPS25-205ENST00000590339 CLUHP3Q96NS8 147 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 MSRB1Q9NZV6 116 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 NAGKQ9UJ70 344 aa6.94□□□□□ -1.3
VPS25-205ENST00000590339 KNCNA6PVL3 124 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 D6R8Y8 96 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 H3BMM0 161 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 RNASE3P12724 160 aaKnown RBP6.93□□□□□ -1.3
VPS25-205ENST00000590339 RAB4AP20338 218 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 PMCHP20382 165 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 CDKN1BP46527 198 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 AMTP48728 403 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 ODF3L2Q3SX64 289 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 ORMDL3Q8N138 153 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 MCRIP2Q9BUT9 160 aaKnown RBP6.93□□□□□ -1.3
VPS25-205ENST00000590339 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 NIT2Q9NQR4 276 aa6.93□□□□□ -1.3
VPS25-205ENST00000590339 M0R2Z0 102 aa6.92□□□□□ -1.3
VPS25-205ENST00000590339 CRXO43186 299 aaPredicted RBP6.92□□□□□ -1.3
VPS25-205ENST00000590339 HSBP1O75506 76 aa6.92□□□□□ -1.3
VPS25-205ENST00000590339 PPBPP02775 128 aa6.92□□□□□ -1.3
VPS25-205ENST00000590339 SPINK13Q1W4C9 94 aa6.92□□□□□ -1.3
VPS25-205ENST00000590339 RNASEKQ6P5S7 137 aaKnown RBP6.92□□□□□ -1.3
VPS25-205ENST00000590339 OR2K2Q8NGT1 345 aa6.92□□□□□ -1.3
VPS25-205ENST00000590339 C9orf85Q96MD7 179 aa6.92□□□□□ -1.3
VPS25-205ENST00000590339 PRELID3AQ96N28 172 aa6.92□□□□□ -1.3
VPS25-205ENST00000590339 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
VPS25-205ENST00000590339 AGRNO00468 2067 aa6.91□□□□□ -1.3
VPS25-205ENST00000590339 TRAV12-3A0A0B4J271 114 aa6.91□□□□□ -1.3
VPS25-205ENST00000590339 NPYP01303 97 aa6.91□□□□□ -1.3
VPS25-205ENST00000590339 IGLV1-51P01701 117 aa6.91□□□□□ -1.3
VPS25-205ENST00000590339 RBMY1A1P0DJD3 496 aaKnown RBP6.91□□□□□ -1.3
VPS25-205ENST00000590339 RBMY1CP0DJD4 496 aa6.91□□□□□ -1.3
VPS25-205ENST00000590339 EGFEM1PQ0D2K5 195 aa6.91□□□□□ -1.3
VPS25-205ENST00000590339 RBMY1FQ15415 496 aaKnown RBP6.91□□□□□ -1.3
VPS25-205ENST00000590339 SPANXN1Q5VSR9 72 aa6.91□□□□□ -1.3
VPS25-205ENST00000590339 FAM159AQ6UWV7 190 aa6.91□□□□□ -1.3
VPS25-205ENST00000590339 TRAV12-2A0A075B6T6 113 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 IGHV1OR15-1A0A075B7D0 117 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 IGHV1-24A0A0C4DH33 117 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 LINC01546A6NGU7 62 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 SMKR1H3BMG3 65 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 GNRH2O43555 120 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 NCR2O95944 276 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 IGKV3-20P01619 116 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 LINC00614P0C842 121 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 EVI2AP22794 236 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 S100A4P26447 101 aaKnown RBP6.9□□□□□ -1.3
VPS25-205ENST00000590339 S100A12P80511 92 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 ZNF124Q15973 351 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 C9orf66Q5T8R8 295 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 DEFB125Q8N687 156 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 Q8N976 141 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 FAM110AQ9BQ89 295 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 LINC00467Q9BRT7 94 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 GSN-AS1Q9NRJ2 163 aa6.9□□□□□ -1.3
VPS25-205ENST00000590339 MUC4Q99102 2169 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 PRKDCP78527 4128 aaKnown RBP6.89□□□□□ -1.31
VPS25-205ENST00000590339 PRSS47A8MTI9 375 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 CKS2P33552 79 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 SSTP61278 116 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 SMIM15Q7Z3B0 74 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 NRACQ8N912 160 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 MRAP2Q96G30 205 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 AP1S3Q96PC3 154 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 C20orf144Q9BQM9 153 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 PHLDA3Q9Y5J5 127 aa6.89□□□□□ -1.31
VPS25-205ENST00000590339 TRGV11A0A075B6L2 103 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 A0A096LNJ9 63 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 M0R381 172 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 SAP30O75446 220 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 GAS8-AS1O95177 125 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 CD7P09564 240 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
VPS25-205ENST00000590339 TEX43Q6ZNM6 134 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms