RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
DNMT1-213ENST00000587604 ZFP2Q6ZN57 461 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 C5orf17Q8NAS9 161 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 PSG8Q9UQ74 426 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
DNMT1-213ENST00000587604 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.26□□□□□ -0.93
DNMT1-213ENST00000587604 GGTLC3B5MD39 225 aa9.26□□□□□ -0.93
DNMT1-213ENST00000587604 ARL14EPLP0DKL9 152 aa9.26□□□□□ -0.93
DNMT1-213ENST00000587604 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
DNMT1-213ENST00000587604 ZFP69Q49AA0 526 aa9.26□□□□□ -0.93
DNMT1-213ENST00000587604 SMUG1Q53HV7 270 aa9.26□□□□□ -0.93
DNMT1-213ENST00000587604 PIK3CD-AS1Q5SR53 167 aa9.26□□□□□ -0.93
DNMT1-213ENST00000587604 DAZ4Q86SG3 579 aaKnown RBP9.26□□□□□ -0.93
DNMT1-213ENST00000587604 PARLQ9H300 379 aa9.26□□□□□ -0.93
DNMT1-213ENST00000587604 DAZ3Q9NR90 486 aaKnown RBP9.26□□□□□ -0.93
DNMT1-213ENST00000587604 A0A087WWC5 75 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 GAGE12JA6NER3 117 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 A8MWV9 139 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 UPK1BO75841 260 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 IGLV2-11P01706 119 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 STAG3L2P0CL84 134 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 STAG3L3P0CL85 134 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 GAGE1Q13065 139 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 GAGE4Q13068 117 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 GAGE5Q13069 117 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 GAGE13Q4V321 117 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 CYB561D1Q8N8Q1 229 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 SUN5Q8TC36 379 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 BAALCQ8WXS3 180 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 MARVELD1Q9BSK0 173 aa9.25□□□□□ -0.93
DNMT1-213ENST00000587604 LRP1Q07954 4544 aaKnown RBP9.24□□□□□ -0.93
DNMT1-213ENST00000587604 SSNA1O43805 119 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 CDC34P49427 236 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-213ENST00000587604 FGF8P55075 233 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-213ENST00000587604 FLI1Q01543 452 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-213ENST00000587604 LINC01620Q4KN68 170 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 SAPCD1Q5SSQ6 148 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 SCXQ7RTU7 201 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 PRNTQ86SH4 94 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 Q8N976 141 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 OR2T35Q8NGX2 323 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 RMI2Q96E14 147 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 EPDR1Q9UM22 224 aa9.24□□□□□ -0.93
DNMT1-213ENST00000587604 RNF222A6NCQ9 220 aa9.23□□□□□ -0.93
DNMT1-213ENST00000587604 RBFOX3A6NFN3 312 aa9.23□□□□□ -0.93
DNMT1-213ENST00000587604 S100A4P26447 101 aaKnown RBP9.23□□□□□ -0.93
DNMT1-213ENST00000587604 GCHFRP30047 84 aa9.23□□□□□ -0.93
DNMT1-213ENST00000587604 SUMO1P63165 101 aaKnown RBP9.23□□□□□ -0.93
DNMT1-213ENST00000587604 IFITM3Q01628 133 aa9.23□□□□□ -0.93
DNMT1-213ENST00000587604 LGALSLQ3ZCW2 172 aaPredicted RBP9.23□□□□□ -0.93
DNMT1-213ENST00000587604 RAB24Q969Q5 203 aa9.23□□□□□ -0.93
DNMT1-213ENST00000587604 LINC00479Q96M42 142 aa9.23□□□□□ -0.93
DNMT1-213ENST00000587604 CHAC1Q9BUX1 264 aa9.23□□□□□ -0.93
DNMT1-213ENST00000587604 Q9UF83 564 aa9.23□□□□□ -0.93
DNMT1-213ENST00000587604 IGKV3D-20A0A0C4DH25 116 aa9.22□□□□□ -0.93
DNMT1-213ENST00000587604 SEC11BP0C7V7 166 aa9.22□□□□□ -0.93
DNMT1-213ENST00000587604 UFSP1Q6NVU6 142 aa9.22□□□□□ -0.93
DNMT1-213ENST00000587604 OR2G3Q8NGZ4 309 aa9.22□□□□□ -0.93
DNMT1-213ENST00000587604 SAMD10Q9BYL1 202 aa9.22□□□□□ -0.93
DNMT1-213ENST00000587604 URGCP-MRPS24S4R325 110 aa9.22□□□□□ -0.93
DNMT1-213ENST00000587604 KRTAP10-4P60372 401 aaPredicted RBP9.21□□□□□ -0.94
DNMT1-213ENST00000587604 NIT1Q86X76 327 aa9.21□□□□□ -0.94
DNMT1-213ENST00000587604 C14orf178Q8N769 122 aaPredicted RBP9.21□□□□□ -0.94
DNMT1-213ENST00000587604 SYT8Q8NBV8 401 aa9.21□□□□□ -0.94
DNMT1-213ENST00000587604 JPT2Q9H910 190 aa9.21□□□□□ -0.94
DNMT1-213ENST00000587604 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.94
DNMT1-213ENST00000587604 IL36BQ9NZH7 164 aa9.21□□□□□ -0.94
DNMT1-213ENST00000587604 IGKV2D-24A0A075B6R9 120 aa9.2□□□□□ -0.94
DNMT1-213ENST00000587604 FABP5P3A8MUU1 101 aa9.2□□□□□ -0.94
DNMT1-213ENST00000587604 OXTP01178 125 aa9.2□□□□□ -0.94
DNMT1-213ENST00000587604 MBP02144 154 aa9.2□□□□□ -0.94
DNMT1-213ENST00000587604 ASIPP42127 132 aa9.2□□□□□ -0.94
DNMT1-213ENST00000587604 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
DNMT1-213ENST00000587604 CIRBP-AS1Q8TBR5 109 aa9.2□□□□□ -0.94
DNMT1-213ENST00000587604 PSMG3Q9BT73 122 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-213ENST00000587604 RHODO00212 210 aa9.19□□□□□ -0.94
DNMT1-213ENST00000587604 CXorf1O96002 111 aa9.19□□□□□ -0.94
DNMT1-213ENST00000587604 SERF2P84101 59 aa9.19□□□□□ -0.94
DNMT1-213ENST00000587604 HSD17B11Q8NBQ5 300 aa9.19□□□□□ -0.94
DNMT1-213ENST00000587604 DNAJC30Q96LL9 226 aa9.19□□□□□ -0.94
DNMT1-213ENST00000587604 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
DNMT1-213ENST00000587604 TRAV34A0A0B4J273 112 aa9.18□□□□□ -0.94
DNMT1-213ENST00000587604 A0A1W2PRE2 83 aa9.18□□□□□ -0.94
DNMT1-213ENST00000587604 ATP6V0CP27449 155 aa9.18□□□□□ -0.94
DNMT1-213ENST00000587604 CHCHD7Q9BUK0 85 aa9.18□□□□□ -0.94
DNMT1-213ENST00000587604 ARL2-SNX15V9GYD0 113 aa9.18□□□□□ -0.94
DNMT1-213ENST00000587604 HMCN2Q8NDA2 5059 aa9.17□□□□□ -0.94
DNMT1-213ENST00000587604 A0A087WX48 190 aa9.17□□□□□ -0.94
DNMT1-213ENST00000587604 B4DEV8 164 aa9.17□□□□□ -0.94
DNMT1-213ENST00000587604 ELOBQ15370 118 aa9.17□□□□□ -0.94
DNMT1-213ENST00000587604 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
DNMT1-213ENST00000587604 ATRAIDQ6UW56 229 aa9.17□□□□□ -0.94
DNMT1-213ENST00000587604 UBE2WQ96B02 151 aa9.17□□□□□ -0.94
DNMT1-213ENST00000587604 ACTR3CQ9C0K3 210 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-213ENST00000587604 TNFSF18Q9UNG2 199 aa9.17□□□□□ -0.94
DNMT1-213ENST00000587604 H3BVH4 76 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms