RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 DAZ2Q13117 558 aaKnown RBP6.7□□□□□ -1.34
CASC3-209ENST00000583902 C1orf158Q8N1D5 194 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 GTSF1Q8WW33 167 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 C9orf85Q96MD7 179 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 GNB1LQ9BYB4 327 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 C11orf21Q9P2W6 132 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 SNURFLB1AK76 121 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 M0R2P5 195 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 ARMS2P0C7Q2 107 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 FXYD7P58549 80 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 SPANXN1Q5VSR9 72 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 TMEM88Q6PEY1 159 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 LYZL1Q6UWQ5 148 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 GATD1Q8NB37 220 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 RNASE8Q8TDE3 154 aaKnown RBP6.69□□□□□ -1.34
CASC3-209ENST00000583902 FAM210BQ96KR6 192 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 YPEL4Q96NS1 127 aa6.69□□□□□ -1.34
CASC3-209ENST00000583902 NOTCH1P46531 2555 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 COLCA2A8K830 154 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 A8MWV9 139 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 SPRY2O43597 315 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 PPP1R17O96001 155 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 FRMD6-AS1P0C7T7 363 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 PRB4P10163 310 aaPredicted RBP6.68□□□□□ -1.34
CASC3-209ENST00000583902 RNASE3P12724 160 aaKnown RBP6.68□□□□□ -1.34
CASC3-209ENST00000583902 MUC21Q5SSG8 566 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 ZNF575Q86XF7 245 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 CBLN2Q8IUK8 224 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 RASL10AQ92737 203 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 TMEM191AQ9H0A3 160 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 URGCP-MRPS24S4R325 110 aa6.68□□□□□ -1.34
CASC3-209ENST00000583902 TMSB15BA0A087X1C1 80 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 A0A1B0GXF2 115 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 LYRM9A8MSI8 78 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 H3BVH4 76 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 RHODO00212 210 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 GNRH2O43555 120 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 GHRHP01286 108 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 RBMY1A1P0DJD3 496 aaKnown RBP6.67□□□□□ -1.34
CASC3-209ENST00000583902 RBMY1CP0DJD4 496 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 RAB5AP20339 215 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 NTF3P20783 257 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 RBMY1FQ15415 496 aaKnown RBP6.67□□□□□ -1.34
CASC3-209ENST00000583902 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 C18orf15Q96N68 181 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 SPATA25Q9BR10 227 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 TIMM8BQ9Y5J9 83 aaPredicted RBP6.67□□□□□ -1.34
CASC3-209ENST00000583902 TRRAPQ9Y4A5 3859 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 MUC4Q99102 2169 aa6.67□□□□□ -1.34
CASC3-209ENST00000583902 NBEAL1Q6ZS30 2694 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 PKD1L1Q8TDX9 2849 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 GRIFINA4D1Z8 144 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 PPBPP02775 128 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 SMIM17P0DL12 118 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 GZMBP10144 247 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 TWIST1Q15672 202 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 OR11H2Q8NH07 326 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 IL17DQ8TAD2 202 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 TPPP3Q9BW30 176 aa6.66□□□□□ -1.34
CASC3-209ENST00000583902 IGHV3OR16-12A0A075B7B8 117 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 TGIF2-C20orf24A0A0A6YYL0 155 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 K7EIL1 84 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 SPINK4O60575 86 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 NHLRC4P0CG21 123 aaPredicted RBP6.65□□□□□ -1.34
CASC3-209ENST00000583902 HTN1P15515 57 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 DEFB135Q30KP9 77 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 ZNF876PQ49A33 203 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 ZFP2Q6ZN57 461 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 OR10AG1Q8NH19 301 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 C11orf68Q9H3H3 251 aaKnown RBP6.65□□□□□ -1.34
CASC3-209ENST00000583902 DPH3P1Q9H4G8 78 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 ZMAT4Q9H898 229 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 MDFICQ9P1T7 246 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 LAMTOR2Q9Y2Q5 125 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 X6R8D5 127 aa6.65□□□□□ -1.34
CASC3-209ENST00000583902 SCO1O75880 301 aa6.64□□□□□ -1.35
CASC3-209ENST00000583902 RPS10P46783 165 aaKnown RBP6.64□□□□□ -1.35
CASC3-209ENST00000583902 DEFB121Q5J5C9 76 aa6.64□□□□□ -1.35
CASC3-209ENST00000583902 MRPL54Q6P161 138 aaKnown RBP6.64□□□□□ -1.35
CASC3-209ENST00000583902 Q6ZQT7 251 aa6.64□□□□□ -1.35
CASC3-209ENST00000583902 TM2D3Q9BRN9 247 aa6.64□□□□□ -1.35
CASC3-209ENST00000583902 EDA2RQ9HAV5 297 aa6.64□□□□□ -1.35
CASC3-209ENST00000583902 GSN-AS1Q9NRJ2 163 aa6.64□□□□□ -1.35
CASC3-209ENST00000583902 TRAPPC1Q9Y5R8 145 aa6.64□□□□□ -1.35
CASC3-209ENST00000583902 H7C1H1 209 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 M0R381 172 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 PHOX2AO14813 284 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 CAMPP49913 170 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 RAB4BP61018 213 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 SLAQ13239 276 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 FAM104BQ5XKR9 115 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 TMEM136Q6ZRR5 245 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 Q8N3U1 123 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 LINC00612Q8N6U2 182 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 POM121L12Q8N7R1 296 aa6.63□□□□□ -1.35
CASC3-209ENST00000583902 MRAPQ8TCY5 172 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms