RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TMEM75Q8N9X5 138 aa7.15□□□□□ -1.26
GGA3-209ENST00000580646 VGLL1Q99990 258 aa7.15□□□□□ -1.26
GGA3-209ENST00000580646 X6R8D5 127 aa7.15□□□□□ -1.26
GGA3-209ENST00000580646 CXCL1P09341 107 aa7.14□□□□□ -1.27
GGA3-209ENST00000580646 FAM3BP58499 235 aaPredicted RBP7.14□□□□□ -1.27
GGA3-209ENST00000580646 ERCC8Q13216 396 aa7.14□□□□□ -1.27
GGA3-209ENST00000580646 PLECQ15149 4684 aaKnown RBP7.14□□□□□ -1.27
GGA3-209ENST00000580646 GOLT1AQ6ZVE7 132 aa7.14□□□□□ -1.27
GGA3-209ENST00000580646 C1orf158Q8N1D5 194 aa7.14□□□□□ -1.27
GGA3-209ENST00000580646 MTURNQ8N3F0 131 aa7.14□□□□□ -1.27
GGA3-209ENST00000580646 Q8NAQ8 132 aa7.14□□□□□ -1.27
GGA3-209ENST00000580646 VAMP8Q9BV40 100 aa7.14□□□□□ -1.27
GGA3-209ENST00000580646 TRAV12-2A0A075B6T6 113 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 TRBV6-1A0A0K0K1D8 114 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 C7orf71A4D174 169 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 TMEM189A5PLL7 270 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 H7BYZ3 331 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 PEX7O00628 323 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 CCL25O15444 150 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 PAGE4O60829 102 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 IFNA1P01562 189 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 GNG5P63218 68 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 OCIAD2Q56VL3 154 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 TEX43Q6ZNM6 134 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 ZFAND2AQ8N6M9 145 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 LINC00467Q9BRT7 94 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 COX11Q9Y6N1 276 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 ALMS1Q8TCU4 4167 aa7.13□□□□□ -1.27
GGA3-209ENST00000580646 ZNF324O75467 553 aaPredicted RBP7.12□□□□□ -1.27
GGA3-209ENST00000580646 IGLV2-11P01706 119 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 GPX1P07203 203 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 RBMY1A1P0DJD3 496 aaKnown RBP7.12□□□□□ -1.27
GGA3-209ENST00000580646 RBMY1CP0DJD4 496 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 PRB4P10163 310 aaPredicted RBP7.12□□□□□ -1.27
GGA3-209ENST00000580646 CCL20P78556 96 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 RBMY1FQ15415 496 aaKnown RBP7.12□□□□□ -1.27
GGA3-209ENST00000580646 CST9LP1Q5W188 147 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 Q6AWC8 147 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 PRR27Q6MZM9 219 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 CEMP1Q6PRD7 247 aaPredicted RBP7.12□□□□□ -1.27
GGA3-209ENST00000580646 Q8TAT8 98 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 FMC1Q96HJ9 113 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 PYGO2Q9BRQ0 406 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 NDFIP1Q9BT67 221 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 PSG8Q9UQ74 426 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 KLF12Q9Y4X4 402 aa7.12□□□□□ -1.27
GGA3-209ENST00000580646 TRAV8-1A0A0A6YYK1 113 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 IGHV4-28A0A0C4DH34 117 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 A0A1B0GV50 99 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 NUPR2A6NF83 97 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 RBFOX3A6NFN3 312 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 C11orf94C9JXX5 98 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 H0Y8G0 127 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 ATP5G3P48201 142 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 MEF2BQ02080 365 aaPredicted RBP7.11□□□□□ -1.27
GGA3-209ENST00000580646 KIR3DS1Q14943 382 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 BATFQ16520 125 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 RRN3P1Q2M238 152 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 ZNF506Q5JVG8 444 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 ZNF493Q6ZR52 646 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 COX8CQ7Z4L0 72 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 C11orf52Q96A22 123 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 LINC01587Q99440 93 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 GNG13Q9P2W3 67 aa7.11□□□□□ -1.27
GGA3-209ENST00000580646 TRAV12-3A0A0B4J271 114 aa7.1□□□□□ -1.27
GGA3-209ENST00000580646 TEX48A0A1B0GUV7 120 aa7.1□□□□□ -1.27
GGA3-209ENST00000580646 PDE6DO43924 150 aa7.1□□□□□ -1.27
GGA3-209ENST00000580646 BCL2P10415 239 aa7.1□□□□□ -1.27
GGA3-209ENST00000580646 UBE2G1P62253 170 aa7.1□□□□□ -1.27
GGA3-209ENST00000580646 PRR9Q5T870 116 aa7.1□□□□□ -1.27
GGA3-209ENST00000580646 C16orf74Q96GX8 76 aa7.1□□□□□ -1.27
GGA3-209ENST00000580646 CST9LQ9H4G1 147 aa7.1□□□□□ -1.27
GGA3-209ENST00000580646 KLK5Q9Y337 293 aaPredicted RBP7.1□□□□□ -1.27
GGA3-209ENST00000580646 IGHV3OR16-12A0A075B7B8 117 aa7.09□□□□□ -1.27
GGA3-209ENST00000580646 DEFB4AO15263 64 aa7.09□□□□□ -1.27
GGA3-209ENST00000580646 SRP19P09132 144 aaKnown RBP7.09□□□□□ -1.27
GGA3-209ENST00000580646 RNASE4P34096 147 aaKnown RBP7.09□□□□□ -1.27
GGA3-209ENST00000580646 NANOS2P60321 138 aaKnown RBP7.09□□□□□ -1.27
GGA3-209ENST00000580646 TDRG1Q3Y452 100 aa7.09□□□□□ -1.27
GGA3-209ENST00000580646 ANXA2RQ3ZCQ2 193 aa7.09□□□□□ -1.27
GGA3-209ENST00000580646 PRNTQ86SH4 94 aa7.09□□□□□ -1.27
GGA3-209ENST00000580646 Q86TA4 180 aa7.09□□□□□ -1.27
GGA3-209ENST00000580646 C11orf45Q8TAV5 145 aa7.09□□□□□ -1.27
GGA3-209ENST00000580646 TMEM263Q8WUH6 116 aaKnown RBP7.09□□□□□ -1.27
GGA3-209ENST00000580646 PHLDA1Q8WV24 401 aaPredicted RBP7.09□□□□□ -1.27
GGA3-209ENST00000580646 MRPS16Q9Y3D3 137 aaKnown RBP7.09□□□□□ -1.27
GGA3-209ENST00000580646 IGHV1OR15-1A0A075B7D0 117 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 TRAV21A0A0B4J279 112 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 LOC102723971A0A1B0GUV8 181 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 SCO2A0A1W2PP80 73 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 ZNF727A8MUV8 499 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 J3KRW8 73 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 LTAP01374 205 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 HNRNPA3P51991 378 aaKnown RBP7.08□□□□□ -1.28
GGA3-209ENST00000580646 IBA57Q5T440 356 aaKnown RBP7.08□□□□□ -1.28
GGA3-209ENST00000580646 LINC00476Q8WZB0 136 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 LAMTOR2Q9Y2Q5 125 aa7.08□□□□□ -1.28
GGA3-209ENST00000580646 URGCP-MRPS24S4R325 110 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms